| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVLVPKVSGNQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGTVGHPLFNKLGDTENPTEPQHEGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGVPLPDAPPPSPLYTPPPPTSPYAVRPSTNYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPANNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9415 | |
| 2 | L | A | 1.9642 | |
| 3 | P | A | 0.6510 | |
| 4 | P | A | 0.3635 | |
| 5 | T | A | 0.1170 | |
| 6 | T | A | 0.1301 | |
| 7 | P | A | 0.1610 | |
| 8 | V | A | 1.2342 | |
| 9 | A | A | 0.0950 | |
| 10 | K | A | -1.0049 | |
| 11 | V | A | -0.1330 | |
| 12 | Q | A | -1.3656 | |
| 13 | S | A | -1.5392 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4154 | |
| 16 | E | A | -2.4353 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4597 | |
| 20 | P | A | 0.1053 | |
| 21 | T | A | 0.1102 | |
| 22 | S | A | -0.1713 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1083 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2981 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9004 | |
| 31 | R | A | -2.6830 | |
| 32 | L | A | -0.7986 | |
| 33 | L | A | 1.1560 | |
| 34 | T | A | 1.3580 | |
| 35 | V | A | 1.8091 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2246 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6371 | |
| 40 | K | A | -1.6960 | |
| 41 | D | A | -0.7388 | |
| 42 | I | A | 1.2469 | |
| 43 | V | A | 2.1181 | |
| 44 | V | A | 1.4539 | |
| 45 | D | A | -1.0284 | |
| 46 | G | A | -0.6078 | |
| 47 | K | A | -0.2839 | |
| 48 | V | A | 1.9291 | |
| 49 | L | A | 2.4634 | |
| 50 | V | A | 1.4351 | |
| 51 | P | A | 0.3054 | |
| 52 | K | A | -0.7171 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | N | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1250 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3822 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2701 | |
| 70 | K | A | -1.7930 | |
| 71 | F | A | -0.6481 | |
| 72 | A | A | -0.5729 | |
| 73 | L | A | -0.8707 | |
| 74 | P | A | -1.2832 | |
| 75 | Q | A | -2.4978 | |
| 76 | K | A | -3.1032 | |
| 77 | D | A | -2.9892 | |
| 78 | F | A | -1.6664 | |
| 79 | Y | A | -1.8872 | |
| 80 | D | A | -2.6865 | |
| 81 | P | A | -2.3024 | |
| 82 | E | A | -3.0427 | |
| 83 | K | A | -3.3925 | |
| 84 | E | A | -2.4524 | |
| 85 | R | A | -1.2840 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6395 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9763 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3606 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6989 | |
| 99 | G | A | -0.5439 | |
| 100 | P | A | -0.4362 | |
| 101 | L | A | -0.0213 | |
| 102 | G | A | -0.3011 | |
| 103 | R | A | -0.7293 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3909 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1714 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4149 | |
| 110 | L | A | 0.3959 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9295 | |
| 113 | K | A | -0.2083 | |
| 114 | L | A | -1.0750 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2868 | |
| 117 | T | A | -0.8178 | |
| 118 | E | A | -1.7801 | |
| 119 | N | A | -2.1721 | |
| 120 | P | A | -1.9787 | |
| 121 | T | A | -1.6821 | |
| 122 | E | A | -2.5091 | |
| 123 | P | A | -1.6715 | |
| 124 | Q | A | -2.0810 | |
| 125 | H | A | -2.2418 | |
| 126 | E | A | -2.7048 | |
| 127 | G | A | -2.1589 | |
| 128 | A | A | -1.4456 | |
| 129 | D | A | -2.1434 | |
| 130 | V | A | -1.3996 | |
| 131 | R | A | -0.6996 | |
| 132 | V | A | 0.4452 | |
| 133 | A | A | 0.4483 | |
| 134 | F | A | 0.2865 | |
| 135 | S | A | -0.0289 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5655 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1940 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1725 | |
| 157 | D | A | 0.3338 | |
| 158 | L | A | 0.7901 | |
| 159 | A | A | 0.1595 | |
| 160 | E | A | -1.4616 | |
| 161 | P | A | -0.2215 | |
| 162 | C | A | 0.1892 | |
| 163 | P | A | -0.1677 | |
| 164 | G | A | -0.0803 | |
| 165 | L | A | 0.5837 | |
| 166 | P | A | -0.1227 | |
| 167 | P | A | -0.3435 | |
| 168 | G | A | -0.4302 | |
| 169 | A | A | 0.2936 | |
| 170 | C | A | 1.0116 | |
| 171 | P | A | 0.5107 | |
| 172 | P | A | 0.8203 | |
| 173 | I | A | 1.9570 | |
| 174 | Q | A | 0.8419 | |
| 175 | L | A | 1.5000 | |
| 176 | V | A | 0.8734 | |
| 177 | N | A | -0.2932 | |
| 178 | S | A | -0.0874 | |
| 179 | V | A | 0.4242 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3884 | |
| 182 | D | A | 0.0839 | |
| 183 | G | A | -0.1572 | |
| 184 | D | A | -0.5266 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1547 | |
| 190 | F | A | 0.0617 | |
| 191 | G | A | -0.1010 | |
| 192 | N | A | -0.2490 | |
| 193 | M | A | -0.1074 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3855 | |
| 197 | E | A | -2.6073 | |
| 198 | L | A | -1.2315 | |
| 199 | Q | A | -2.5574 | |
| 200 | Q | A | -3.3053 | |
| 201 | D | A | -3.5633 | |
| 202 | R | A | -3.3370 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1771 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3349 | |
| 211 | S | A | -1.8784 | |
| 212 | T | A | -1.4214 | |
| 213 | R | A | -2.0356 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1546 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3484 | |
| 220 | L | A | 0.5716 | |
| 221 | K | A | -1.1798 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8389 | |
| 224 | N | A | -1.6014 | |
| 225 | E | A | -1.2552 | |
| 226 | A | A | -0.5988 | |
| 227 | Y | A | -0.3629 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7036 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0720 | |
| 234 | F | A | 0.2644 | |
| 235 | G | A | -0.8058 | |
| 236 | R | A | -2.5736 | |
| 237 | R | A | -2.8028 | |
| 238 | E | A | -2.0851 | |
| 239 | Q | A | -0.1350 | |
| 240 | V | A | 1.4446 | |
| 241 | Y | A | 1.1716 | |
| 242 | A | A | 0.1556 | |
| 243 | R | A | -1.1458 | |
| 244 | H | A | -0.9918 | |
| 245 | F | A | 0.0883 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4012 | |
| 249 | A | A | -1.2082 | |
| 250 | G | A | -1.0915 | |
| 251 | P | A | -0.7992 | |
| 252 | D | A | -0.3887 | |
| 253 | G | A | 0.1194 | |
| 254 | V | A | 1.3588 | |
| 255 | P | A | 0.0152 | |
| 256 | L | A | 0.2321 | |
| 257 | P | A | -0.4420 | |
| 258 | D | A | -1.8840 | |
| 259 | A | A | -0.8895 | |
| 260 | P | A | -0.9130 | |
| 261 | P | A | -0.6237 | |
| 262 | P | A | -0.3211 | |
| 263 | S | A | -0.1809 | |
| 264 | P | A | 0.3984 | |
| 265 | L | A | 1.5008 | |
| 266 | Y | A | 0.6175 | |
| 267 | T | A | 0.0685 | |
| 268 | P | A | -0.3280 | |
| 269 | P | A | 0.0830 | |
| 270 | P | A | -0.3094 | |
| 271 | P | A | -0.0536 | |
| 272 | T | A | 0.0362 | |
| 273 | S | A | 0.3739 | |
| 274 | P | A | 0.3851 | |
| 275 | Y | A | 1.3987 | |
| 276 | A | A | 1.0001 | |
| 277 | V | A | 1.4192 | |
| 278 | R | A | 0.3479 | |
| 279 | P | A | -0.4994 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.0973 | |
| 282 | N | A | -0.2516 | |
| 283 | Y | A | 1.0371 | |
| 284 | F | A | 0.7825 | |
| 285 | G | A | 0.2197 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9509 | |
| 291 | L | A | 1.6067 | |
| 292 | V | A | 0.6034 | |
| 293 | S | A | -0.1601 | |
| 294 | S | A | -0.9645 | |
| 295 | D | A | -1.8429 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1057 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6464 | |
| 301 | R | A | -1.8714 | |
| 302 | P | A | -0.9922 | |
| 303 | F | A | -0.1893 | |
| 304 | W | A | -0.5623 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0804 | |
| 307 | R | A | -2.8287 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3725 | |
| 310 | G | A | -1.2205 | |
| 311 | N | A | -1.2551 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7629 | |
| 319 | N | A | -0.8332 | |
| 320 | E | A | -1.0209 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3883 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1306 | |
| 333 | N | A | 0.5684 | |
| 334 | F | A | 1.8057 | |
| 335 | T | A | 0.9466 | |
| 336 | I | A | 0.4787 | |
| 337 | S | A | -1.0644 | |
| 338 | Q | A | -1.9520 | |
| 339 | Q | A | -1.9527 | |
| 340 | L | A | -0.2239 | |
| 341 | S | A | -0.3491 | |
| 342 | T | A | -0.4492 | |
| 343 | P | A | -0.8158 | |
| 344 | A | A | -0.7938 | |
| 345 | N | A | -1.2879 | |
| 346 | N | A | -0.8666 | |
| 347 | V | A | 1.1169 | |
| 348 | Y | A | 1.1235 | |
| 349 | D | A | -0.3746 | |
| 350 | P | A | -0.7317 | |
| 351 | S | A | -0.6292 | |
| 352 | N | A | -0.7192 | |
| 353 | F | A | -1.2251 | |
| 354 | K | A | -2.2057 | |
| 355 | N | A | -1.7995 | |
| 356 | Y | A | 0.0606 | |
| 357 | L | A | 0.7739 | |
| 358 | R | A | 1.0467 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3870 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0838 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0453 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6861 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3034 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3135 | |
| 376 | L | A | -1.7139 | |
| 377 | D | A | -1.9979 | |
| 378 | P | A | -1.0417 | |
| 379 | G | A | -1.0143 | |
| 380 | V | A | -0.9325 | |
| 381 | L | A | -0.5339 | |
| 382 | A | A | -0.6565 | |
| 383 | H | A | -0.8012 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4021 | |
| 386 | T | A | -0.5446 | |
| 387 | M | A | -0.3477 | |
| 388 | N | A | -0.8560 | |
| 389 | P | A | -1.2253 | |
| 390 | T | A | -1.3969 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3808 | |
| 393 | E | A | -2.7042 | |
| 394 | N | A | -2.4185 | |
| 395 | W | A | -1.2881 | |
| 396 | N | A | -1.2029 | |
| 397 | L | A | -0.1771 | |
| 398 | G | A | 0.5667 | |
| 399 | F | A | 2.4207 | |
| 400 | V | A | 1.8242 | |
| 401 | P | A | 0.0568 | |
| 402 | P | A | -1.7425 | |
| 403 | K | A | -3.3974 | |
| 404 | E | A | -3.7984 | |
| 405 | R | A | -3.7970 | |
| 406 | E | A | -3.7329 | |
| 407 | D | A | -2.8483 | |
| 408 | P | A | -1.7533 | |
| 409 | Y | A | -0.9870 | |
| 410 | K | A | -2.1083 | |
| 411 | G | A | -0.6368 | |
| 412 | L | A | 0.6794 | |
| 413 | I | A | 1.5908 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3862 | |
| 416 | E | A | -1.6665 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9441 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0620 | |
| 421 | E | A | -2.7951 | |
| 422 | R | A | -2.5962 | |
| 423 | F | A | -1.2940 | |
| 424 | S | A | -1.4791 | |
| 425 | Q | A | -1.7959 | |
| 426 | D | A | -2.9698 | |
| 427 | L | A | -2.1559 | |
| 428 | D | A | -3.0081 | |
| 429 | Q | A | -2.7420 | |
| 430 | F | A | -1.5895 | |
| 431 | A | A | -1.1198 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2424 | |
| 435 | K | A | -1.0725 | |
| 436 | F | A | -0.0916 | |
| 437 | L | A | 0.7963 | |
| 438 | Y | A | 0.6363 | |
| 439 | Q | A | -0.3874 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine