| Chain sequence(s) |
A: VKKLIKKLILLLLRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 0.8274 | |
| 2 | K | A | -1.3692 | |
| 3 | K | A | -1.6146 | |
| 4 | L | A | 0.6040 | |
| 5 | I | A | 0.5641 | |
| 6 | K | A | -0.9186 | |
| 7 | K | A | -0.3013 | |
| 8 | L | A | 1.3057 | |
| 9 | I | A | 2.1079 | |
| 10 | L | A | 1.6447 | |
| 11 | L | A | 1.8509 | |
| 12 | L | A | 2.5141 | |
| 13 | L | A | 2.0696 | |
| 14 | R | A | 0.0327 | |
| 15 | T | A | 0.4563 |