Project name: query_structure

Status: done

Started: 2026-03-16 23:18:16
Settings
Chain sequence(s) A: GCGGLMAGCDGKSTFCCSGYNCSPTWKWCVYARP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-2.7509
Maximal score value
2.2391
Average score
-0.174
Total score value
-5.9152

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2636
2 C A 0.8323
3 G A 0.8101
4 G A 1.3422
5 L A 2.2391
6 M A 1.8219
7 A A 0.4546
8 G A -0.5416
9 C A 0.0000
10 D A -2.7509
11 G A -2.0588
12 K A -2.3333
13 S A -1.0241
14 T A -0.5974
15 F A 1.3518
16 C A 0.0000
17 C A 0.7240
18 S A 0.1081
19 G A -0.3499
20 Y A 0.5741
21 N A -0.5817
22 C A 0.0000
23 S A -0.8438
24 P A -1.4187
25 T A -0.3801
26 W A 0.1658
27 K A -1.8504
28 W A -0.4771
29 C A 0.0000
30 V A 1.2522
31 Y A 1.0975
32 A A -0.6290
33 R A -1.8369
34 P A -1.2788
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Laboratory of Theory of Biopolymers 2018