| Chain sequence(s) |
H: EVQLVESGGKLLKPGGSLKLSCAASGFTFSSFAMSWFRQSPEKRLEWVAEISSGGSYTYYPDTVTGRFTISRDNAKNTLYLEMSSLRSEDTAMYYCARGLWGYYALDYWGQGTSVTVSS
L: QIVLIQSPAIMSASPGEKVTMTCSASSSVSYMYWYQQKPGSSPRLLIYDTSNLASGVPVRFSGSGSGTSYSLTISRMEAEDAATYYCQQWSGYPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:49)
[INFO] Main: Simulation completed successfully. (00:01:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9889 | |
| 2 | V | H | -0.9258 | |
| 3 | Q | H | -0.7738 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0050 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4995 | |
| 8 | G | H | -1.0225 | |
| 9 | G | H | -1.0645 | |
| 11 | K | H | -1.3123 | |
| 12 | L | H | 0.0528 | |
| 13 | L | H | -0.7577 | |
| 14 | K | H | -1.8562 | |
| 15 | P | H | -1.7296 | |
| 16 | G | H | -1.3812 | |
| 17 | G | H | -1.0242 | |
| 18 | S | H | -1.0072 | |
| 19 | L | H | 0.0000 | |
| 20 | K | H | -1.5263 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2291 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0659 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7071 | |
| 27 | G | H | -1.1751 | |
| 28 | F | H | -0.4865 | |
| 29 | T | H | -0.2504 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.8167 | |
| 36 | S | H | -0.0631 | |
| 37 | F | H | 0.0000 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | S | H | 0.0000 | |
| 46 | P | H | -2.0038 | |
| 47 | E | H | -3.0956 | |
| 48 | K | H | -3.1611 | |
| 49 | R | H | -2.5639 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6268 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.3352 | |
| 58 | S | H | -0.1762 | |
| 59 | G | H | -0.5974 | |
| 62 | G | H | -0.2947 | |
| 63 | S | H | 0.1543 | |
| 64 | Y | H | 1.2627 | |
| 65 | T | H | 1.0449 | |
| 66 | Y | H | 1.5303 | |
| 67 | Y | H | 0.3448 | |
| 68 | P | H | 0.0000 | |
| 69 | D | H | -1.9076 | |
| 70 | T | H | -1.1817 | |
| 71 | V | H | 0.0000 | |
| 72 | T | H | -0.7024 | |
| 74 | G | H | -0.8618 | |
| 75 | R | H | -0.8586 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.4130 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2810 | |
| 80 | R | H | -0.9469 | |
| 81 | D | H | -1.3803 | |
| 82 | N | H | -1.5636 | |
| 83 | A | H | -1.2997 | |
| 84 | K | H | -2.2373 | |
| 85 | N | H | -1.7611 | |
| 86 | T | H | -0.9384 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3870 | |
| 89 | L | H | 0.0000 | |
| 90 | E | H | -1.2044 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.9925 | |
| 93 | S | H | -1.0946 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2067 | |
| 96 | S | H | -1.9242 | |
| 97 | E | H | -2.3137 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8895 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.1905 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | L | H | 1.2016 | |
| 109 | W | H | 1.4674 | |
| 110 | G | H | 0.7425 | |
| 112 | Y | H | 1.4135 | |
| 113 | Y | H | 1.1402 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.0165 | |
| 117 | Y | H | 0.4384 | |
| 118 | W | H | 0.0636 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9860 | |
| 121 | G | H | -0.3337 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.5696 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.6455 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7995 | |
| 128 | S | H | -0.7330 | |
| 1 | Q | L | -0.7240 | |
| 2 | I | L | 0.7274 | |
| 3 | V | L | 1.9013 | |
| 4 | L | L | 0.0000 | |
| 5 | I | L | 2.0859 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | 0.3943 | |
| 8 | P | L | 0.5616 | |
| 9 | A | L | 0.8098 | |
| 10 | I | L | 1.5630 | |
| 11 | M | L | 0.6242 | |
| 12 | S | L | -0.3398 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -1.8100 | |
| 15 | P | L | -2.1488 | |
| 16 | G | L | -2.5541 | |
| 17 | E | L | -3.3637 | |
| 18 | K | L | -3.2834 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6117 | |
| 21 | M | L | 0.0000 | |
| 22 | T | L | 0.0477 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | 0.5381 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | 0.4412 | |
| 27 | S | L | -0.1863 | |
| 28 | S | L | -0.4505 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | -0.1153 | |
| 38 | Y | L | 0.5025 | |
| 39 | M | L | 0.0000 | |
| 40 | Y | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.9591 | |
| 45 | K | L | -1.4092 | |
| 46 | P | L | -0.8269 | |
| 47 | G | L | -0.9400 | |
| 48 | S | L | -1.0032 | |
| 49 | S | L | -0.8310 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.9966 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.3797 | |
| 56 | D | L | 0.0000 | |
| 57 | T | L | -0.1378 | |
| 65 | S | L | -0.4411 | |
| 66 | N | L | -0.5950 | |
| 67 | L | L | 0.3347 | |
| 68 | A | L | -0.1062 | |
| 69 | S | L | -0.4624 | |
| 70 | G | L | -0.2787 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | 0.6237 | |
| 74 | V | L | 1.6259 | |
| 75 | R | L | -0.2249 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.0202 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.5718 | |
| 80 | G | L | -0.6116 | |
| 83 | S | L | -0.5470 | |
| 84 | G | L | -0.5654 | |
| 85 | T | L | -0.5155 | |
| 86 | S | L | -0.4153 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.3572 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7664 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.9138 | |
| 93 | R | L | -3.4938 | |
| 94 | M | L | 0.0000 | |
| 95 | E | L | -2.5700 | |
| 96 | A | L | -1.5051 | |
| 97 | E | L | -2.1622 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.1412 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.6979 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | 0.5444 | |
| 108 | S | L | 0.2301 | |
| 109 | G | L | 0.0718 | |
| 114 | Y | L | 0.5681 | |
| 115 | P | L | 0.0326 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | 0.2446 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.5466 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.4214 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.3998 | |
| 126 | I | L | -0.5677 | |
| 127 | K | L | -1.5543 |