| Chain sequence(s) |
A: MARESEFRLTKAQREEVSKLSRSVKAKTTRLLKNYGQDFTAYISPKSPDDFKSLNEFNAFKKRAENFTDRSNRDFQFVQNQYGVVISKSELDEILRDTKKAQETAEKILDKFNDVEVISGGKSTGFTVGENKELLAKPDKGFGRIEDFDFESVRTQEGLDRFAARAKNRSKEAYYEESLRRLQDNFIRSVEGTFNSDADDVVEKLRNLPADDFYELFSIYDEISFENFDSENALGMASESILERVRMYVNAYFDGKSDMSLKGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | AA2A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.0 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:03:33)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:36)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:45)
[INFO] Main: Simulation completed successfully. (00:06:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.3565 | |
| 2 | A | A | -0.8356 | mutated: AA2A |
| 3 | R | A | -2.7637 | |
| 4 | E | A | -3.0971 | |
| 5 | S | A | -2.6448 | |
| 6 | E | A | -3.2462 | |
| 7 | F | A | -2.1083 | |
| 8 | R | A | -3.0757 | |
| 9 | L | A | 0.0000 | |
| 10 | T | A | -1.8058 | |
| 11 | K | A | -2.7440 | |
| 12 | A | A | -1.8965 | |
| 13 | Q | A | -2.2631 | |
| 14 | R | A | -3.1060 | |
| 15 | E | A | -3.4383 | |
| 16 | E | A | -3.0957 | |
| 17 | V | A | 0.0000 | |
| 18 | S | A | -2.6324 | |
| 19 | K | A | -3.2437 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | 0.0000 | |
| 22 | R | A | -3.2828 | |
| 23 | S | A | -2.3207 | |
| 24 | V | A | 0.0000 | |
| 25 | K | A | -2.8315 | |
| 26 | A | A | -1.9362 | |
| 27 | K | A | -1.6899 | |
| 28 | T | A | 0.0000 | |
| 29 | T | A | -2.1296 | |
| 30 | R | A | -3.0087 | |
| 31 | L | A | 0.0000 | |
| 32 | L | A | -1.7899 | |
| 33 | K | A | -2.7220 | |
| 34 | N | A | -1.8617 | |
| 35 | Y | A | -1.1692 | |
| 36 | G | A | -1.5102 | |
| 37 | Q | A | -1.5468 | |
| 38 | D | A | -1.9604 | |
| 39 | F | A | -0.5132 | |
| 40 | T | A | -0.3924 | |
| 41 | A | A | 0.2009 | |
| 42 | Y | A | 0.5245 | |
| 43 | I | A | 0.0000 | |
| 44 | S | A | -0.5284 | |
| 45 | P | A | -1.7047 | |
| 46 | K | A | -2.1818 | |
| 47 | S | A | -1.8450 | |
| 48 | P | A | -2.9798 | |
| 49 | D | A | -3.4725 | |
| 50 | D | A | -3.6217 | |
| 51 | F | A | 0.0000 | |
| 52 | K | A | -3.1132 | |
| 53 | S | A | -1.7245 | |
| 54 | L | A | -0.4505 | |
| 55 | N | A | -1.6849 | |
| 56 | E | A | -2.0421 | |
| 57 | F | A | 0.0000 | |
| 58 | N | A | -1.9814 | |
| 59 | A | A | -1.9520 | |
| 60 | F | A | 0.0000 | |
| 61 | K | A | -3.0701 | |
| 62 | K | A | -3.7337 | |
| 63 | R | A | -3.5750 | |
| 64 | A | A | 0.0000 | |
| 65 | E | A | -3.9709 | |
| 66 | N | A | -3.6050 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | 0.0000 | |
| 69 | D | A | -3.2104 | |
| 70 | R | A | -3.0403 | |
| 71 | S | A | -2.1163 | |
| 72 | N | A | -2.6103 | |
| 73 | R | A | -2.7578 | |
| 74 | D | A | -2.5476 | |
| 75 | F | A | -1.7517 | |
| 76 | Q | A | -1.7663 | |
| 77 | F | A | -0.6452 | |
| 78 | V | A | 0.0019 | |
| 79 | Q | A | -0.6970 | |
| 80 | N | A | 0.0000 | |
| 81 | Q | A | -1.5104 | |
| 82 | Y | A | -0.6778 | |
| 83 | G | A | -0.8646 | |
| 84 | V | A | 0.0000 | |
| 85 | V | A | -0.3291 | |
| 86 | I | A | 0.0000 | |
| 87 | S | A | 0.0000 | |
| 88 | K | A | -1.9799 | |
| 89 | S | A | -2.4438 | |
| 90 | E | A | -2.8844 | |
| 91 | L | A | -1.7156 | |
| 92 | D | A | -2.1224 | |
| 93 | E | A | -3.3719 | |
| 94 | I | A | 0.0000 | |
| 95 | L | A | -2.1550 | |
| 96 | R | A | -3.2781 | |
| 97 | D | A | -3.2447 | |
| 98 | T | A | 0.0000 | |
| 99 | K | A | -3.2995 | |
| 100 | K | A | -3.1622 | |
| 101 | A | A | 0.0000 | |
| 102 | Q | A | -3.3829 | |
| 103 | E | A | -3.4750 | |
| 104 | T | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | E | A | -3.6291 | |
| 107 | K | A | -3.5166 | |
| 108 | I | A | -2.6204 | |
| 109 | L | A | 0.0000 | |
| 110 | D | A | -3.5497 | |
| 111 | K | A | -3.3417 | |
| 112 | F | A | 0.0000 | |
| 113 | N | A | -2.6833 | |
| 114 | D | A | -2.8535 | |
| 115 | V | A | -1.8554 | |
| 116 | E | A | -1.9821 | |
| 117 | V | A | 0.0000 | |
| 118 | I | A | -1.0068 | |
| 119 | S | A | -1.3446 | |
| 120 | G | A | -1.1639 | |
| 121 | G | A | -1.2527 | |
| 122 | K | A | -2.0861 | |
| 123 | S | A | -1.3058 | |
| 124 | T | A | -0.8756 | |
| 125 | G | A | -0.7256 | |
| 126 | F | A | -0.1054 | |
| 127 | T | A | -1.3587 | |
| 128 | V | A | 0.0000 | |
| 129 | G | A | -2.0850 | |
| 130 | E | A | -1.6841 | |
| 131 | N | A | -0.8593 | |
| 132 | K | A | -1.2998 | |
| 133 | E | A | -1.6129 | |
| 134 | L | A | 0.7002 | |
| 135 | L | A | 0.6849 | |
| 136 | A | A | -0.4150 | |
| 137 | K | A | -1.3170 | |
| 138 | P | A | -1.6189 | |
| 139 | D | A | 0.0000 | |
| 140 | K | A | -1.2641 | |
| 141 | G | A | -1.1201 | |
| 142 | F | A | 0.0000 | |
| 143 | G | A | -1.7200 | |
| 144 | R | A | -2.9282 | |
| 145 | I | A | -2.4101 | |
| 146 | E | A | -3.3904 | |
| 147 | D | A | -3.2758 | |
| 148 | F | A | -2.2350 | |
| 149 | D | A | -2.6141 | |
| 150 | F | A | 0.0000 | |
| 151 | E | A | -2.3208 | |
| 152 | S | A | -1.7171 | |
| 153 | V | A | -1.9048 | |
| 154 | R | A | -2.4072 | |
| 155 | T | A | -2.0597 | |
| 156 | Q | A | -2.7813 | |
| 157 | E | A | -3.6179 | |
| 158 | G | A | -2.7795 | |
| 159 | L | A | 0.0000 | |
| 160 | D | A | -3.5827 | |
| 161 | R | A | -3.4815 | |
| 162 | F | A | -2.3061 | |
| 163 | A | A | -2.5267 | |
| 164 | A | A | -2.3072 | |
| 165 | R | A | -2.6377 | |
| 166 | A | A | 0.0000 | |
| 167 | K | A | -3.2916 | |
| 168 | N | A | -2.3975 | |
| 169 | R | A | -2.4275 | |
| 170 | S | A | -2.8935 | |
| 171 | K | A | -2.5472 | |
| 172 | E | A | -2.5206 | |
| 173 | A | A | -1.9623 | |
| 174 | Y | A | -1.8484 | |
| 175 | Y | A | 0.0000 | |
| 176 | E | A | -3.7063 | |
| 177 | E | A | -3.5926 | |
| 178 | S | A | -2.6659 | |
| 179 | L | A | 0.0000 | |
| 180 | R | A | -4.1717 | |
| 181 | R | A | -4.0158 | |
| 182 | L | A | 0.0000 | |
| 183 | Q | A | 0.0000 | |
| 184 | D | A | -3.8479 | |
| 185 | N | A | -2.7968 | |
| 186 | F | A | 0.0000 | |
| 187 | I | A | 0.0000 | |
| 188 | R | A | -3.2362 | |
| 189 | S | A | -2.2643 | |
| 190 | V | A | 0.0000 | |
| 191 | E | A | -3.2519 | |
| 192 | G | A | -2.1629 | |
| 193 | T | A | -1.7029 | |
| 194 | F | A | -1.8415 | |
| 195 | N | A | -2.9699 | |
| 196 | S | A | -2.6393 | |
| 197 | D | A | -3.2722 | |
| 198 | A | A | 0.0000 | |
| 199 | D | A | -3.7429 | |
| 200 | D | A | -2.7030 | |
| 201 | V | A | 0.0000 | |
| 202 | V | A | 0.0000 | |
| 203 | E | A | -3.7246 | |
| 204 | K | A | -2.7517 | |
| 205 | L | A | 0.0000 | |
| 206 | R | A | -3.7001 | |
| 207 | N | A | -2.6651 | |
| 208 | L | A | 0.0000 | |
| 209 | P | A | -1.2625 | |
| 210 | A | A | -2.5000 | |
| 211 | D | A | -1.6562 | |
| 212 | D | A | 0.0000 | |
| 213 | F | A | 0.0000 | |
| 214 | Y | A | 0.0000 | |
| 215 | E | A | 0.0000 | |
| 216 | L | A | 0.0000 | |
| 217 | F | A | 0.0000 | |
| 218 | S | A | -0.4906 | |
| 219 | I | A | 0.0000 | |
| 220 | Y | A | -0.9118 | |
| 221 | D | A | -1.3590 | |
| 222 | E | A | -1.1816 | |
| 223 | I | A | 0.0000 | |
| 224 | S | A | 0.0000 | |
| 225 | F | A | -1.3183 | |
| 226 | E | A | -2.4624 | |
| 227 | N | A | -1.6396 | |
| 228 | F | A | 0.0000 | |
| 229 | D | A | -3.0982 | |
| 230 | S | A | -2.5632 | |
| 231 | E | A | -2.7251 | |
| 232 | N | A | -2.0757 | |
| 233 | A | A | -0.9438 | |
| 234 | L | A | 0.5870 | |
| 235 | G | A | 0.1751 | |
| 236 | M | A | 0.5376 | |
| 237 | A | A | -0.0171 | |
| 238 | S | A | 0.0000 | |
| 239 | E | A | -1.9380 | |
| 240 | S | A | -1.3808 | |
| 241 | I | A | -1.1088 | |
| 242 | L | A | 0.0000 | |
| 243 | E | A | -2.2149 | |
| 244 | R | A | -1.7697 | |
| 245 | V | A | 0.0000 | |
| 246 | R | A | -1.0565 | |
| 247 | M | A | -0.3503 | |
| 248 | Y | A | 0.0000 | |
| 249 | V | A | 0.0000 | |
| 250 | N | A | -0.7815 | |
| 251 | A | A | -1.2111 | |
| 252 | Y | A | -0.7939 | |
| 253 | F | A | -0.2263 | |
| 254 | D | A | -1.9580 | |
| 255 | G | A | -2.1834 | |
| 256 | K | A | -2.7078 | |
| 257 | S | A | -2.1813 | |
| 258 | D | A | -2.4016 | |
| 259 | M | A | 0.0000 | |
| 260 | S | A | -1.2950 | |
| 261 | L | A | -1.2226 | |
| 262 | K | A | -1.7426 | |
| 263 | G | A | -0.5316 | |
| 264 | F | A | 1.0873 |