Project name: query_structure

Status: done

Started: 2026-03-16 22:49:29
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Chain sequence(s) A: GSMTEETHPDDDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLIE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:25)
Show buried residues

Minimal score value
-3.6413
Maximal score value
1.3743
Average score
-1.1334
Total score value
-142.8067

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.1235
2 S A -0.5202
3 M A 0.1183
4 T A -0.9151
5 E A -2.5585
6 E A -2.9611
7 T A -2.3153
8 H A -1.8805
9 P A -2.1480
10 D A -3.1993
11 D A -2.2415
12 D A -2.4891
13 S A -1.0655
14 Y A -0.1436
15 I A 1.1491
16 V A 0.5933
17 R A -0.3922
18 V A 0.0000
19 K A -1.7793
20 A A 0.0000
21 V A 0.0000
22 V A 0.0000
23 M A -0.2386
24 T A 0.0000
25 R A -2.0627
26 D A -2.5333
27 D A -3.0840
28 S A -1.8540
29 S A -1.2498
30 G A -0.8895
31 G A -0.6654
32 W A -0.2175
33 F A 0.0411
34 P A -0.7228
35 Q A -1.5169
36 E A -1.1655
37 G A -1.3401
38 G A -0.9074
39 G A -1.0215
40 I A -1.2010
41 S A 0.0000
42 R A -2.4074
43 V A 0.0000
44 G A 0.0000
45 V A 0.0000
46 C A 0.0000
47 K A -0.3370
48 V A -0.1960
49 M A -1.1018
50 H A -1.7339
51 P A -1.5782
52 E A -2.7663
53 G A -2.4875
54 N A -2.7601
55 G A -2.2261
56 R A -3.0866
57 S A -2.0409
58 G A 0.0000
59 F A 0.0000
60 L A 0.0000
61 I A 0.0000
62 H A 0.0000
63 G A 0.0000
64 E A 0.0000
65 R A -2.2407
66 Q A -3.2362
67 K A -3.5065
68 D A -3.2608
69 K A -2.1454
70 L A -0.2536
71 V A 0.6598
72 V A -0.3168
73 L A 0.0000
74 E A -1.1285
75 C A 0.0000
76 Y A 0.1626
77 V A 0.0000
78 R A -2.7213
79 K A -2.6176
80 D A -1.1298
81 L A 0.3872
82 V A 1.3743
83 Y A 0.4700
84 T A -0.2871
85 K A -1.1655
86 A A -0.9571
87 N A -1.5665
88 P A -1.2636
89 T A -1.0343
90 F A -0.6528
91 H A 0.0000
92 H A 0.0000
93 W A 0.0000
94 K A -1.9148
95 V A -1.3350
96 D A -2.7880
97 N A -3.2160
98 R A -3.6413
99 K A -2.7804
100 F A -1.4817
101 G A 0.0000
102 L A 0.0000
103 T A -0.3443
104 F A 0.0000
105 Q A -0.9556
106 S A -0.9564
107 P A -0.9869
108 A A -0.9085
109 D A 0.0000
110 A A -1.5642
111 R A -2.4513
112 A A -1.8682
113 F A 0.0000
114 D A 0.0000
115 R A -3.1658
116 G A -1.9997
117 V A 0.0000
118 R A -3.4043
119 K A -3.0960
120 A A 0.0000
121 I A -1.5875
122 E A -3.2057
123 D A -3.1776
124 L A 0.0000
125 I A -0.4042
126 E A -1.9204
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Laboratory of Theory of Biopolymers 2018