| Chain sequence(s) |
A: GSMTEETHPDDDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLIE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.1235 | |
| 2 | S | A | -0.5202 | |
| 3 | M | A | 0.1183 | |
| 4 | T | A | -0.9151 | |
| 5 | E | A | -2.5585 | |
| 6 | E | A | -2.9611 | |
| 7 | T | A | -2.3153 | |
| 8 | H | A | -1.8805 | |
| 9 | P | A | -2.1480 | |
| 10 | D | A | -3.1993 | |
| 11 | D | A | -2.2415 | |
| 12 | D | A | -2.4891 | |
| 13 | S | A | -1.0655 | |
| 14 | Y | A | -0.1436 | |
| 15 | I | A | 1.1491 | |
| 16 | V | A | 0.5933 | |
| 17 | R | A | -0.3922 | |
| 18 | V | A | 0.0000 | |
| 19 | K | A | -1.7793 | |
| 20 | A | A | 0.0000 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | 0.0000 | |
| 23 | M | A | -0.2386 | |
| 24 | T | A | 0.0000 | |
| 25 | R | A | -2.0627 | |
| 26 | D | A | -2.5333 | |
| 27 | D | A | -3.0840 | |
| 28 | S | A | -1.8540 | |
| 29 | S | A | -1.2498 | |
| 30 | G | A | -0.8895 | |
| 31 | G | A | -0.6654 | |
| 32 | W | A | -0.2175 | |
| 33 | F | A | 0.0411 | |
| 34 | P | A | -0.7228 | |
| 35 | Q | A | -1.5169 | |
| 36 | E | A | -1.1655 | |
| 37 | G | A | -1.3401 | |
| 38 | G | A | -0.9074 | |
| 39 | G | A | -1.0215 | |
| 40 | I | A | -1.2010 | |
| 41 | S | A | 0.0000 | |
| 42 | R | A | -2.4074 | |
| 43 | V | A | 0.0000 | |
| 44 | G | A | 0.0000 | |
| 45 | V | A | 0.0000 | |
| 46 | C | A | 0.0000 | |
| 47 | K | A | -0.3370 | |
| 48 | V | A | -0.1960 | |
| 49 | M | A | -1.1018 | |
| 50 | H | A | -1.7339 | |
| 51 | P | A | -1.5782 | |
| 52 | E | A | -2.7663 | |
| 53 | G | A | -2.4875 | |
| 54 | N | A | -2.7601 | |
| 55 | G | A | -2.2261 | |
| 56 | R | A | -3.0866 | |
| 57 | S | A | -2.0409 | |
| 58 | G | A | 0.0000 | |
| 59 | F | A | 0.0000 | |
| 60 | L | A | 0.0000 | |
| 61 | I | A | 0.0000 | |
| 62 | H | A | 0.0000 | |
| 63 | G | A | 0.0000 | |
| 64 | E | A | 0.0000 | |
| 65 | R | A | -2.2407 | |
| 66 | Q | A | -3.2362 | |
| 67 | K | A | -3.5065 | |
| 68 | D | A | -3.2608 | |
| 69 | K | A | -2.1454 | |
| 70 | L | A | -0.2536 | |
| 71 | V | A | 0.6598 | |
| 72 | V | A | -0.3168 | |
| 73 | L | A | 0.0000 | |
| 74 | E | A | -1.1285 | |
| 75 | C | A | 0.0000 | |
| 76 | Y | A | 0.1626 | |
| 77 | V | A | 0.0000 | |
| 78 | R | A | -2.7213 | |
| 79 | K | A | -2.6176 | |
| 80 | D | A | -1.1298 | |
| 81 | L | A | 0.3872 | |
| 82 | V | A | 1.3743 | |
| 83 | Y | A | 0.4700 | |
| 84 | T | A | -0.2871 | |
| 85 | K | A | -1.1655 | |
| 86 | A | A | -0.9571 | |
| 87 | N | A | -1.5665 | |
| 88 | P | A | -1.2636 | |
| 89 | T | A | -1.0343 | |
| 90 | F | A | -0.6528 | |
| 91 | H | A | 0.0000 | |
| 92 | H | A | 0.0000 | |
| 93 | W | A | 0.0000 | |
| 94 | K | A | -1.9148 | |
| 95 | V | A | -1.3350 | |
| 96 | D | A | -2.7880 | |
| 97 | N | A | -3.2160 | |
| 98 | R | A | -3.6413 | |
| 99 | K | A | -2.7804 | |
| 100 | F | A | -1.4817 | |
| 101 | G | A | 0.0000 | |
| 102 | L | A | 0.0000 | |
| 103 | T | A | -0.3443 | |
| 104 | F | A | 0.0000 | |
| 105 | Q | A | -0.9556 | |
| 106 | S | A | -0.9564 | |
| 107 | P | A | -0.9869 | |
| 108 | A | A | -0.9085 | |
| 109 | D | A | 0.0000 | |
| 110 | A | A | -1.5642 | |
| 111 | R | A | -2.4513 | |
| 112 | A | A | -1.8682 | |
| 113 | F | A | 0.0000 | |
| 114 | D | A | 0.0000 | |
| 115 | R | A | -3.1658 | |
| 116 | G | A | -1.9997 | |
| 117 | V | A | 0.0000 | |
| 118 | R | A | -3.4043 | |
| 119 | K | A | -3.0960 | |
| 120 | A | A | 0.0000 | |
| 121 | I | A | -1.5875 | |
| 122 | E | A | -3.2057 | |
| 123 | D | A | -3.1776 | |
| 124 | L | A | 0.0000 | |
| 125 | I | A | -0.4042 | |
| 126 | E | A | -1.9204 |