| Chain sequence(s) |
B: LRALADEMMDGVKAAMKLMRKAAEEAGNEKALKLVEKKEKELKEKMKKLK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:56)
[INFO] Main: Simulation completed successfully. (00:02:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 0.7771 | |
| 2 | R | B | -1.4550 | |
| 3 | A | B | -0.8521 | |
| 4 | L | B | 0.1816 | |
| 5 | A | B | -1.3568 | |
| 6 | D | B | -2.9360 | |
| 7 | E | B | -2.8461 | |
| 8 | M | B | -1.6586 | |
| 9 | M | B | 0.0000 | |
| 10 | D | B | -3.1069 | |
| 11 | G | B | -2.2089 | |
| 12 | V | B | -1.4634 | |
| 13 | K | B | -2.1263 | |
| 14 | A | B | -1.1549 | |
| 15 | A | B | -0.6797 | |
| 16 | M | B | 0.0000 | |
| 17 | K | B | -1.7536 | |
| 18 | L | B | 0.0413 | |
| 19 | M | B | -0.6625 | |
| 20 | R | B | -2.2536 | |
| 21 | K | B | -2.4012 | |
| 22 | A | B | -1.7656 | |
| 23 | A | B | 0.0000 | |
| 24 | E | B | -3.6813 | |
| 25 | E | B | -3.3224 | |
| 26 | A | B | -2.4073 | |
| 27 | G | B | -2.8820 | |
| 28 | N | B | -3.3513 | |
| 29 | E | B | -3.6747 | |
| 30 | K | B | -3.2665 | |
| 31 | A | B | -2.4563 | |
| 32 | L | B | -3.2993 | |
| 33 | K | B | -3.4793 | |
| 34 | L | B | -2.0761 | |
| 35 | V | B | 0.0000 | |
| 36 | E | B | -4.1847 | |
| 37 | K | B | -4.1541 | |
| 38 | K | B | -3.6133 | |
| 39 | E | B | -4.0114 | |
| 40 | K | B | -4.5051 | |
| 41 | E | B | -4.6483 | |
| 42 | L | B | -3.4711 | |
| 43 | K | B | -3.6751 | |
| 44 | E | B | -3.8798 | |
| 45 | K | B | -3.5961 | |
| 46 | M | B | 0.0000 | |
| 47 | K | B | -3.6738 | |
| 48 | K | B | -3.0528 | |
| 49 | L | B | -1.4813 | |
| 50 | K | B | -2.7478 |