| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPLHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPDGHPLPDAPPPSPLYTPPPPTSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPKDNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9412 | |
| 2 | L | A | 1.9636 | |
| 3 | P | A | 0.8301 | |
| 4 | P | A | 0.3736 | |
| 5 | T | A | 0.1197 | |
| 6 | T | A | 0.1304 | |
| 7 | P | A | 0.1768 | |
| 8 | V | A | 1.2104 | |
| 9 | A | A | 0.0857 | |
| 10 | K | A | -1.0243 | |
| 11 | V | A | -0.1609 | |
| 12 | Q | A | -1.4075 | |
| 13 | S | A | -1.5619 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4465 | |
| 16 | E | A | -2.4516 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4549 | |
| 20 | P | A | 0.1269 | |
| 21 | T | A | 0.1849 | |
| 22 | S | A | -0.0894 | |
| 23 | L | A | 0.1440 | |
| 24 | F | A | -0.0037 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2954 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9025 | |
| 31 | R | A | -2.6911 | |
| 32 | L | A | -0.8101 | |
| 33 | L | A | 1.1481 | |
| 34 | T | A | 1.3568 | |
| 35 | V | A | 1.8064 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2429 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6229 | |
| 40 | K | A | -1.6439 | |
| 41 | D | A | -0.9407 | |
| 42 | I | A | 0.8243 | |
| 43 | V | A | 1.0169 | |
| 44 | K | A | -1.1811 | |
| 45 | N | A | -1.9308 | |
| 46 | G | A | -1.2347 | |
| 47 | K | A | -0.9801 | |
| 48 | V | A | 1.4403 | |
| 49 | V | A | 2.0231 | |
| 50 | V | A | 1.2249 | |
| 51 | P | A | 0.4159 | |
| 52 | K | A | -0.6584 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1431 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4207 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2787 | |
| 70 | K | A | -1.7991 | |
| 71 | F | A | -0.6525 | |
| 72 | A | A | -0.5801 | |
| 73 | L | A | -0.8638 | |
| 74 | P | A | -1.2667 | |
| 75 | Q | A | -2.5032 | |
| 76 | K | A | -3.1060 | |
| 77 | D | A | -2.9877 | |
| 78 | F | A | -1.6534 | |
| 79 | Y | A | -1.8833 | |
| 80 | D | A | -2.6796 | |
| 81 | P | A | -2.3007 | |
| 82 | E | A | -3.0468 | |
| 83 | K | A | -3.3946 | |
| 84 | E | A | -2.4592 | |
| 85 | R | A | -1.2903 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6433 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9754 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3656 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7010 | |
| 99 | G | A | -0.5416 | |
| 100 | P | A | -0.4050 | |
| 101 | L | A | 0.0423 | |
| 102 | G | A | -0.1942 | |
| 103 | K | A | -0.5913 | |
| 104 | G | A | -0.4728 | |
| 105 | S | A | -0.5141 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1289 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4109 | |
| 110 | L | A | 0.3077 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1186 | |
| 113 | K | A | -0.4613 | |
| 114 | L | A | -1.1981 | |
| 115 | G | A | -1.0487 | |
| 116 | D | A | -1.3480 | |
| 117 | T | A | -1.0022 | |
| 118 | E | A | -1.7233 | |
| 119 | N | A | -2.1572 | |
| 120 | P | A | -1.8881 | |
| 121 | T | A | -1.5668 | |
| 122 | E | A | -2.2961 | |
| 123 | P | A | -0.8301 | |
| 124 | L | A | -0.9691 | |
| 125 | H | A | -1.6456 | |
| 126 | E | A | -2.3257 | |
| 127 | G | A | -2.0763 | |
| 128 | A | A | -1.5158 | |
| 129 | D | A | -2.4096 | |
| 130 | D | A | -1.9869 | |
| 131 | R | A | -1.0843 | |
| 132 | V | A | 0.2651 | |
| 133 | A | A | 0.4426 | |
| 134 | F | A | 0.2798 | |
| 135 | S | A | -0.0895 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5499 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2059 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5703 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1865 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1904 | |
| 157 | D | A | 0.3645 | |
| 158 | L | A | 0.8260 | |
| 159 | A | A | 0.1901 | |
| 160 | E | A | -1.4456 | |
| 161 | P | A | -0.2006 | |
| 162 | C | A | 0.1899 | |
| 163 | P | A | -0.1734 | |
| 164 | G | A | -0.0844 | |
| 165 | L | A | 0.5752 | |
| 166 | P | A | -0.1240 | |
| 167 | P | A | -0.3439 | |
| 168 | G | A | -0.4247 | |
| 169 | A | A | -0.0237 | |
| 170 | C | A | 0.6618 | |
| 171 | P | A | 0.5379 | |
| 172 | P | A | 0.8670 | |
| 173 | I | A | 2.0373 | |
| 174 | Q | A | 0.8706 | |
| 175 | L | A | 1.5017 | |
| 176 | V | A | 0.8616 | |
| 177 | N | A | -0.3095 | |
| 178 | S | A | 0.0187 | |
| 179 | V | A | 0.4107 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3800 | |
| 182 | D | A | 0.0837 | |
| 183 | G | A | -0.1546 | |
| 184 | D | A | -0.5096 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0498 | |
| 190 | F | A | 0.0327 | |
| 191 | G | A | -0.1041 | |
| 192 | N | A | -0.2254 | |
| 193 | M | A | -0.0683 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3669 | |
| 197 | E | A | -2.5861 | |
| 198 | L | A | -1.2089 | |
| 199 | Q | A | -2.5524 | |
| 200 | Q | A | -3.3003 | |
| 201 | D | A | -3.5652 | |
| 202 | R | A | -3.3307 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2038 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3257 | |
| 211 | S | A | -1.8590 | |
| 212 | T | A | -1.3813 | |
| 213 | R | A | -1.9621 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1293 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3541 | |
| 220 | L | A | 0.5776 | |
| 221 | K | A | -1.1687 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8358 | |
| 224 | N | A | -1.5110 | |
| 225 | E | A | -1.2459 | |
| 226 | A | A | -0.6027 | |
| 227 | Y | A | -0.3720 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6894 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0685 | |
| 234 | F | A | 0.2542 | |
| 235 | G | A | -0.8253 | |
| 236 | R | A | -2.4707 | |
| 237 | R | A | -2.5871 | |
| 238 | E | A | -1.5479 | |
| 239 | Q | A | 0.0660 | |
| 240 | V | A | 1.4984 | |
| 241 | Y | A | 1.0560 | |
| 242 | A | A | 0.1803 | |
| 243 | R | A | -0.9602 | |
| 244 | H | A | -0.9203 | |
| 245 | F | A | 0.1022 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8130 | |
| 249 | S | A | -1.3835 | |
| 250 | G | A | -1.2048 | |
| 251 | P | A | -1.1263 | |
| 252 | D | A | -1.4583 | |
| 253 | G | A | -1.2844 | |
| 254 | H | A | -1.4560 | |
| 255 | P | A | -1.3603 | |
| 256 | L | A | -0.3723 | |
| 257 | P | A | -0.8330 | |
| 258 | D | A | -1.8799 | |
| 259 | A | A | -0.8831 | |
| 260 | P | A | -0.9247 | |
| 261 | P | A | -0.6298 | |
| 262 | P | A | -0.3181 | |
| 263 | S | A | -0.1858 | |
| 264 | P | A | 0.3986 | |
| 265 | L | A | 1.5007 | |
| 266 | Y | A | 0.6094 | |
| 267 | T | A | 0.0592 | |
| 268 | P | A | -0.2566 | |
| 269 | P | A | 0.0734 | |
| 270 | P | A | -0.3103 | |
| 271 | P | A | -0.0543 | |
| 272 | T | A | 0.0359 | |
| 273 | S | A | 0.3665 | |
| 274 | P | A | 0.2648 | |
| 275 | Y | A | 1.3438 | |
| 276 | A | A | 1.0032 | |
| 277 | V | A | 1.3967 | |
| 278 | R | A | 0.0702 | |
| 279 | P | A | -0.5537 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5678 | |
| 282 | D | A | -0.7948 | |
| 283 | Y | A | 0.9075 | |
| 284 | F | A | 0.7353 | |
| 285 | G | A | 0.2601 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8856 | |
| 291 | L | A | 1.6284 | |
| 292 | V | A | 0.6435 | |
| 293 | S | A | -0.1609 | |
| 294 | S | A | -0.9623 | |
| 295 | D | A | -1.8428 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1122 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6461 | |
| 301 | R | A | -1.8761 | |
| 302 | P | A | -0.9876 | |
| 303 | F | A | -0.1979 | |
| 304 | W | A | -0.5674 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0821 | |
| 307 | R | A | -2.8390 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2698 | |
| 310 | G | A | -1.2306 | |
| 311 | N | A | -1.2797 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8639 | |
| 319 | N | A | -0.9611 | |
| 320 | E | A | -1.0496 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3358 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0993 | |
| 333 | N | A | 0.5112 | |
| 334 | F | A | 1.6911 | |
| 335 | T | A | 0.8468 | |
| 336 | I | A | 0.4341 | |
| 337 | S | A | -0.9619 | |
| 338 | Q | A | -1.7472 | |
| 339 | Q | A | -1.3764 | |
| 340 | L | A | 0.6446 | |
| 341 | C | A | 0.2524 | |
| 342 | T | A | -0.3563 | |
| 343 | P | A | -0.9680 | |
| 344 | K | A | -2.3524 | |
| 345 | D | A | -2.4820 | |
| 346 | N | A | -1.6018 | |
| 347 | V | A | 0.4754 | |
| 348 | Y | A | 0.9195 | |
| 349 | D | A | -0.2935 | |
| 350 | P | A | -0.4061 | |
| 351 | S | A | -0.3250 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8169 | |
| 354 | K | A | -1.7880 | |
| 355 | N | A | -1.7682 | |
| 356 | Y | A | -0.0908 | |
| 357 | L | A | 0.6274 | |
| 358 | R | A | 0.9397 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3651 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0920 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0620 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6912 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3018 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3112 | |
| 376 | L | A | -1.7119 | |
| 377 | D | A | -1.9895 | |
| 378 | P | A | -1.0369 | |
| 379 | G | A | -1.0143 | |
| 380 | V | A | -0.9328 | |
| 381 | L | A | -0.5325 | |
| 382 | A | A | -0.6553 | |
| 383 | H | A | -0.8071 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4097 | |
| 386 | T | A | -0.5499 | |
| 387 | M | A | -0.2992 | |
| 388 | N | A | -0.8639 | |
| 389 | P | A | -1.2565 | |
| 390 | T | A | -1.4750 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4554 | |
| 393 | E | A | -2.8001 | |
| 394 | N | A | -2.4632 | |
| 395 | W | A | -1.3873 | |
| 396 | N | A | -1.0731 | |
| 397 | L | A | -0.1705 | |
| 398 | G | A | 0.5396 | |
| 399 | F | A | 2.4283 | |
| 400 | V | A | 1.8490 | |
| 401 | P | A | 0.0566 | |
| 402 | P | A | -1.8877 | |
| 403 | K | A | -3.3560 | |
| 404 | E | A | -3.8286 | |
| 405 | R | A | -4.0332 | |
| 406 | E | A | -3.8411 | |
| 407 | D | A | -2.8957 | |
| 408 | P | A | -1.7774 | |
| 409 | Y | A | -0.9885 | |
| 410 | K | A | -2.1173 | |
| 411 | G | A | -0.6393 | |
| 412 | L | A | 0.6677 | |
| 413 | I | A | 1.5856 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3822 | |
| 416 | E | A | -1.6673 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9443 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0639 | |
| 421 | E | A | -2.7951 | |
| 422 | R | A | -2.6490 | |
| 423 | F | A | -1.2730 | |
| 424 | S | A | -1.4323 | |
| 425 | Q | A | -1.7898 | |
| 426 | D | A | -2.8566 | |
| 427 | L | A | -1.9589 | |
| 428 | D | A | -2.7666 | |
| 429 | Q | A | -2.6093 | |
| 430 | F | A | -1.4202 | |
| 431 | A | A | -0.8904 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5565 | |
| 435 | K | A | -0.6952 | |
| 436 | F | A | 0.1544 | |
| 437 | L | A | 1.0331 | |
| 438 | Y | A | 0.8339 | |
| 439 | Q | A | -0.2734 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine