| Chain sequence(s) |
A: APTSSSTKKTQLQLEHLLLDLQMILNGINNYKNPELTRMLTKKFYMPKKATELKHLQCLEEELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFSDSIISTLT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:23)
[INFO] Main: Simulation completed successfully. (00:02:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.1241 | |
| 2 | P | A | -0.5052 | |
| 3 | T | A | -0.5450 | |
| 4 | S | A | -0.9647 | |
| 5 | S | A | -1.2628 | |
| 6 | S | A | -1.3704 | |
| 7 | T | A | -1.2458 | |
| 8 | K | A | -2.1222 | |
| 9 | K | A | -2.4683 | |
| 10 | T | A | -1.6178 | |
| 11 | Q | A | -1.4355 | |
| 12 | L | A | -1.1197 | |
| 13 | Q | A | -1.1398 | |
| 14 | L | A | 0.0000 | |
| 15 | E | A | -1.1033 | |
| 16 | H | A | -0.9421 | |
| 17 | L | A | 0.0000 | |
| 18 | L | A | -0.1012 | |
| 19 | L | A | 0.8348 | |
| 20 | D | A | -0.1777 | |
| 21 | L | A | 0.0000 | |
| 22 | Q | A | -0.4720 | |
| 23 | M | A | -0.3974 | |
| 24 | I | A | 0.0000 | |
| 25 | L | A | -1.1702 | |
| 26 | N | A | -1.9537 | |
| 27 | G | A | -1.6964 | |
| 28 | I | A | 0.0000 | |
| 29 | N | A | -1.8168 | |
| 30 | N | A | -1.5482 | |
| 31 | Y | A | -0.1978 | |
| 32 | K | A | -1.8129 | |
| 33 | N | A | 0.0000 | |
| 34 | P | A | -1.2115 | |
| 35 | E | A | -1.4346 | |
| 36 | L | A | -0.9269 | |
| 37 | T | A | -1.0189 | |
| 38 | R | A | -1.9307 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | -0.7662 | |
| 41 | T | A | -1.0985 | |
| 42 | K | A | -1.7954 | |
| 43 | K | A | -1.8461 | |
| 44 | F | A | 0.0000 | |
| 45 | Y | A | -0.0228 | |
| 46 | M | A | 0.0000 | |
| 47 | P | A | 0.0000 | |
| 48 | K | A | -2.8753 | |
| 49 | K | A | -2.8197 | |
| 50 | A | A | -1.9850 | |
| 51 | T | A | -1.3770 | |
| 52 | E | A | -2.0681 | |
| 53 | L | A | -1.2804 | |
| 54 | K | A | -1.6919 | |
| 55 | H | A | -1.5729 | |
| 56 | L | A | 0.0000 | |
| 57 | Q | A | -0.7764 | |
| 58 | C | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | E | A | -0.9838 | |
| 61 | E | A | -1.2455 | |
| 62 | E | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.6586 | |
| 65 | P | A | -1.7781 | |
| 66 | L | A | 0.0000 | |
| 67 | E | A | -2.4455 | |
| 68 | E | A | -2.0498 | |
| 69 | V | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | N | A | -1.5966 | |
| 72 | L | A | -0.6856 | |
| 73 | A | A | 0.0000 | |
| 74 | Q | A | -2.2198 | |
| 75 | S | A | -2.2231 | |
| 76 | K | A | -2.8789 | |
| 77 | N | A | -2.5410 | |
| 78 | F | A | 0.0000 | |
| 79 | H | A | -1.5612 | |
| 80 | L | A | -1.7872 | |
| 81 | R | A | -3.4795 | |
| 82 | P | A | 0.0000 | |
| 83 | R | A | -3.9094 | |
| 84 | D | A | -3.5223 | |
| 85 | L | A | 0.0000 | |
| 86 | I | A | 0.0000 | |
| 87 | S | A | -1.6213 | |
| 88 | N | A | -1.3889 | |
| 89 | I | A | 0.0000 | |
| 90 | N | A | -0.4788 | |
| 91 | V | A | 1.0383 | |
| 92 | I | A | -0.0031 | |
| 93 | V | A | 0.0000 | |
| 94 | L | A | 0.0999 | |
| 95 | E | A | -1.1400 | |
| 96 | L | A | 0.0000 | |
| 97 | K | A | -1.5664 | |
| 98 | G | A | -1.5154 | |
| 99 | S | A | -1.5569 | |
| 100 | E | A | -2.2052 | |
| 101 | T | A | -0.9799 | |
| 102 | T | A | -0.3438 | |
| 103 | F | A | -0.0294 | |
| 104 | M | A | 0.7682 | |
| 105 | C | A | -0.3776 | |
| 106 | E | A | -1.2376 | |
| 107 | Y | A | -1.1628 | |
| 108 | A | A | -2.0876 | |
| 109 | D | A | -2.7429 | |
| 110 | E | A | -2.7787 | |
| 111 | T | A | -1.6170 | |
| 112 | A | A | -1.3863 | |
| 113 | T | A | -0.9161 | |
| 114 | I | A | 0.0000 | |
| 115 | V | A | -1.0126 | |
| 116 | E | A | -1.9928 | |
| 117 | F | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | N | A | -1.6370 | |
| 120 | R | A | -1.7045 | |
| 121 | W | A | 0.0000 | |
| 122 | I | A | -0.9278 | |
| 123 | T | A | -1.0272 | |
| 124 | F | A | 0.0000 | |
| 125 | S | A | 0.0000 | |
| 126 | D | A | -1.9583 | |
| 127 | S | A | -1.0601 | |
| 128 | I | A | 0.0000 | |
| 129 | I | A | -0.4564 | |
| 130 | S | A | -0.4692 | |
| 131 | T | A | -0.0706 | |
| 132 | L | A | 0.4167 | |
| 133 | T | A | 0.0556 |