| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGRTFSYNPMGWFRQAPGKGRELVAAISRTGGSTYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAAGVRAEDGRVRTLPSEYTFWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.5458 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.5678 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.1211 | |
| 6 | E | A | 0.1571 | |
| 7 | S | A | -0.5225 | |
| 8 | G | A | -1.1997 | |
| 9 | G | A | -0.8411 | |
| 10 | G | A | -0.1038 | |
| 11 | L | A | 0.9361 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3594 | |
| 14 | P | A | -1.5597 | |
| 15 | G | A | -1.3558 | |
| 16 | G | A | -1.0199 | |
| 17 | S | A | -1.5349 | |
| 18 | L | A | -1.1504 | |
| 19 | R | A | -2.3599 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4314 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1840 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.4691 | |
| 26 | G | A | -2.2305 | |
| 27 | R | A | -2.4430 | |
| 28 | T | A | -1.2212 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.8607 | |
| 31 | Y | A | -0.6567 | |
| 32 | N | A | 0.0000 | |
| 33 | P | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.6591 | |
| 40 | A | A | -1.6349 | |
| 41 | P | A | -1.2102 | |
| 42 | G | A | -1.6851 | |
| 43 | K | A | -2.6713 | |
| 44 | G | A | -2.1973 | |
| 45 | R | A | -2.0571 | |
| 46 | E | A | -1.1809 | |
| 47 | L | A | -0.0006 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | R | A | -1.8653 | |
| 54 | T | A | -1.5300 | |
| 55 | G | A | -1.2215 | |
| 56 | G | A | -1.2920 | |
| 57 | S | A | -0.9609 | |
| 58 | T | A | -0.1004 | |
| 59 | Y | A | 0.1290 | |
| 60 | Y | A | -0.6670 | |
| 61 | P | A | -1.3172 | |
| 62 | D | A | -2.5568 | |
| 63 | S | A | -1.8575 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | -2.7294 | |
| 66 | G | A | -1.9768 | |
| 67 | R | A | -1.9478 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -1.0456 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.4946 | |
| 72 | R | A | -1.0670 | |
| 73 | D | A | -1.5402 | |
| 74 | N | A | -1.6810 | |
| 75 | A | A | -1.4585 | |
| 76 | K | A | -2.4379 | |
| 77 | R | A | -2.1835 | |
| 78 | M | A | -1.0393 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6155 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.7791 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -2.1463 | |
| 85 | S | A | -1.4710 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.3674 | |
| 88 | A | A | -1.7281 | |
| 89 | E | A | -2.2554 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8762 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4263 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.2104 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | G | A | 0.1787 | |
| 101 | V | A | 0.5599 | |
| 102 | R | A | -1.6930 | |
| 103 | A | A | -2.2103 | |
| 104 | E | A | -3.4382 | |
| 105 | D | A | -3.6747 | |
| 106 | G | A | -2.6926 | |
| 107 | R | A | -3.1655 | |
| 108 | V | A | -0.9440 | |
| 109 | R | A | -0.1099 | |
| 110 | T | A | 0.6469 | |
| 111 | L | A | 1.1541 | |
| 112 | P | A | 0.0304 | |
| 113 | S | A | -0.1710 | |
| 114 | E | A | -0.2096 | |
| 115 | Y | A | 0.0000 | |
| 116 | T | A | 0.1012 | |
| 117 | F | A | -0.2332 | |
| 118 | W | A | 0.1208 | |
| 119 | G | A | -0.1719 | |
| 120 | Q | A | -0.8867 | |
| 121 | G | A | -0.5477 | |
| 122 | T | A | -0.7097 | |
| 123 | Q | A | -0.9966 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.3342 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -0.7577 | |
| 128 | S | A | -0.6886 |