| Chain sequence(s) |
A: GVKPIRLFFGQQRRDVYPSALRRLLRFIAPDLVITHMEAHVNEATGRGKGCAWVIVPSVLEAKRLLRLSGRIFLDINSNGEEVYLFAPPNCREWLSEYADYVVSSTTRASHLPYLPMVVGVPKKECIYVRELLAPYIYDPNRGDCPPYADAVSEFKGLLEDHASLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:05)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.0800 | |
| 2 | V | A | 0.7046 | |
| 3 | K | A | -1.0061 | |
| 4 | P | A | -0.6266 | |
| 5 | I | A | 0.0000 | |
| 6 | R | A | -0.5321 | |
| 7 | L | A | 0.0000 | |
| 8 | F | A | 1.0145 | |
| 9 | F | A | 0.0000 | |
| 10 | G | A | 0.4022 | |
| 11 | Q | A | 0.0512 | |
| 12 | Q | A | -0.5573 | |
| 13 | R | A | -1.0198 | |
| 14 | R | A | -1.7920 | |
| 15 | D | A | -0.8956 | |
| 16 | V | A | 0.0689 | |
| 17 | Y | A | 0.5877 | |
| 18 | P | A | -0.6556 | |
| 19 | S | A | -0.9290 | |
| 20 | A | A | -1.6005 | |
| 21 | L | A | 0.0000 | |
| 22 | R | A | -2.7430 | |
| 23 | R | A | -3.0213 | |
| 24 | L | A | 0.0000 | |
| 25 | L | A | 0.0000 | |
| 26 | R | A | -2.0149 | |
| 27 | F | A | 0.2238 | |
| 28 | I | A | 0.2894 | |
| 29 | A | A | -0.5489 | |
| 30 | P | A | -1.1197 | |
| 31 | D | A | -1.4670 | |
| 32 | L | A | 0.0000 | |
| 33 | V | A | 1.3562 | |
| 34 | I | A | 0.5558 | |
| 35 | T | A | 0.2334 | |
| 36 | H | A | -0.8115 | |
| 37 | M | A | -0.7130 | |
| 38 | E | A | -0.4316 | |
| 39 | A | A | -0.4022 | |
| 40 | H | A | -0.9901 | |
| 41 | V | A | -1.2752 | |
| 42 | N | A | -2.1344 | |
| 43 | E | A | -2.4741 | |
| 44 | A | A | -1.3022 | |
| 45 | T | A | -1.4860 | |
| 46 | G | A | -1.8909 | |
| 47 | R | A | -2.5253 | |
| 48 | G | A | 0.0000 | |
| 49 | K | A | -2.0957 | |
| 50 | G | A | -1.4771 | |
| 51 | C | A | -0.3883 | |
| 52 | A | A | 0.0000 | |
| 53 | W | A | -0.0334 | |
| 54 | V | A | 0.0000 | |
| 55 | I | A | 0.1672 | |
| 56 | V | A | 0.0000 | |
| 57 | P | A | 0.4561 | |
| 58 | S | A | 0.8138 | |
| 59 | V | A | 0.9642 | |
| 60 | L | A | 1.5834 | |
| 61 | E | A | 0.7197 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -0.1265 | |
| 64 | R | A | -0.7494 | |
| 65 | L | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | R | A | -1.6423 | |
| 68 | L | A | 0.0000 | |
| 69 | S | A | 0.0000 | |
| 70 | G | A | 0.0000 | |
| 71 | R | A | -0.6534 | |
| 72 | I | A | 0.0000 | |
| 73 | F | A | 0.0000 | |
| 74 | L | A | 0.0000 | |
| 75 | D | A | 0.0000 | |
| 76 | I | A | -0.0080 | |
| 77 | N | A | -0.7339 | |
| 78 | S | A | -1.1021 | |
| 79 | N | A | -1.7925 | |
| 80 | G | A | -1.3647 | |
| 81 | E | A | -1.2752 | |
| 82 | E | A | -0.6766 | |
| 83 | V | A | 0.0000 | |
| 84 | Y | A | 0.0000 | |
| 85 | L | A | -0.2658 | |
| 86 | F | A | -0.3945 | |
| 87 | A | A | 0.0000 | |
| 88 | P | A | -1.0007 | |
| 89 | P | A | -1.8451 | |
| 90 | N | A | -2.7265 | |
| 91 | C | A | 0.0000 | |
| 92 | R | A | -2.6450 | |
| 93 | E | A | -3.5597 | |
| 94 | W | A | -1.7822 | |
| 95 | L | A | 0.0000 | |
| 96 | S | A | -1.5372 | |
| 97 | E | A | -2.3080 | |
| 98 | Y | A | -0.8576 | |
| 99 | A | A | 0.0000 | |
| 100 | D | A | -1.3109 | |
| 101 | Y | A | 0.0978 | |
| 102 | V | A | 0.0000 | |
| 103 | V | A | 0.1598 | |
| 104 | S | A | -0.0997 | |
| 105 | S | A | -0.1638 | |
| 106 | T | A | 0.1094 | |
| 107 | T | A | -0.1339 | |
| 108 | R | A | 0.0000 | |
| 109 | A | A | -0.0827 | |
| 110 | S | A | -0.3683 | |
| 111 | H | A | -1.0280 | |
| 112 | L | A | 0.0000 | |
| 113 | P | A | 0.0000 | |
| 114 | Y | A | 1.0200 | |
| 115 | L | A | 0.8660 | |
| 116 | P | A | 0.0000 | |
| 117 | M | A | 0.0000 | |
| 118 | V | A | 1.5411 | |
| 119 | V | A | 0.0000 | |
| 120 | G | A | 0.5105 | |
| 121 | V | A | -0.1608 | |
| 122 | P | A | 0.0000 | |
| 123 | K | A | -2.1877 | |
| 124 | K | A | -2.1953 | |
| 125 | E | A | 0.0000 | |
| 126 | C | A | 0.5314 | |
| 127 | I | A | 1.7441 | |
| 128 | Y | A | 1.8277 | |
| 129 | V | A | 0.7987 | |
| 130 | R | A | -0.2280 | |
| 131 | E | A | -0.7145 | |
| 132 | L | A | 0.2521 | |
| 133 | L | A | 0.0000 | |
| 134 | A | A | -0.0734 | |
| 135 | P | A | -0.1263 | |
| 136 | Y | A | -0.0102 | |
| 137 | I | A | 0.6036 | |
| 138 | Y | A | -0.5243 | |
| 139 | D | A | -1.7750 | |
| 140 | P | A | -2.4450 | |
| 141 | N | A | -3.1484 | |
| 142 | R | A | -3.8244 | |
| 143 | G | A | -3.5638 | |
| 144 | D | A | -3.4694 | |
| 145 | C | A | -1.7092 | |
| 146 | P | A | -0.7330 | |
| 147 | P | A | -0.1665 | |
| 148 | Y | A | 0.9669 | |
| 149 | A | A | -0.1675 | |
| 150 | D | A | -1.5371 | |
| 151 | A | A | 0.0000 | |
| 152 | V | A | 0.1343 | |
| 153 | S | A | -1.1425 | |
| 154 | E | A | -2.2853 | |
| 155 | F | A | -1.3229 | |
| 156 | K | A | -1.7943 | |
| 157 | G | A | -0.7783 | |
| 158 | L | A | 0.0000 | |
| 159 | L | A | 0.4382 | |
| 160 | E | A | 0.0000 | |
| 161 | D | A | -2.2675 | |
| 162 | H | A | -1.5985 | |
| 163 | A | A | -0.4917 | |
| 164 | S | A | 0.1160 | |
| 165 | L | A | 1.6419 | |
| 166 | P | A | 1.3158 | |
| 167 | V | A | 2.2114 |