Project name: query_structure

Status: done

Started: 2026-03-17 00:52:46
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Chain sequence(s) A: QVQLVESGGGLVQPGGSLRLSSAASGYFYSSNYSLGWFRQAPGKGLEGVAQINIAPGRIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYSASTAGNMYYGLRGPADFDYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:01)
Show buried residues

Minimal score value
-2.9833
Maximal score value
1.8605
Average score
-0.468
Total score value
-59.4401

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4410
2 V A -0.4738
3 Q A -0.9913
4 L A 0.0000
5 V A 1.1288
6 E A 0.0294
7 S A -0.6761
8 G A -1.1487
9 G A -0.8597
10 G A -0.0543
11 L A 1.0056
12 V A -0.0940
13 Q A -1.4509
14 P A -1.8607
15 G A -1.6002
16 G A -1.0905
17 S A -1.3437
18 L A -0.9582
19 R A -2.1912
20 L A 0.0000
21 S A -0.4556
22 S A 0.0000
23 A A 0.0682
24 A A 0.1851
25 S A -0.2215
26 G A -0.4658
27 Y A 0.4961
28 F A 1.0669
29 Y A 0.0000
30 S A 0.1775
31 S A -0.1989
32 N A -0.5824
33 Y A -0.0364
34 S A 0.0000
35 L A 0.0000
36 G A 0.0000
37 W A 0.0000
38 F A 0.0000
39 R A 0.0000
40 Q A -1.0233
41 A A -1.4236
42 P A -1.3500
43 G A -1.5118
44 K A -2.2261
45 G A -1.2595
46 L A -0.1987
47 E A -0.4727
48 G A -0.1583
49 V A 0.0000
50 A A 0.0000
51 Q A 0.0000
52 I A 0.6256
53 N A 0.0000
54 I A 0.5146
55 A A 0.1951
56 P A -0.1151
57 G A -0.4791
58 R A -0.6607
59 I A 1.0348
60 Y A 0.6630
61 Y A -0.1502
62 A A 0.0000
63 D A -2.3913
64 S A -1.7602
65 V A 0.0000
66 K A -2.5375
67 G A -1.7612
68 R A -1.5397
69 F A 0.0000
70 T A -0.6225
71 I A 0.0000
72 S A -0.2734
73 R A -0.8999
74 D A -1.7108
75 N A -1.3577
76 S A -1.3806
77 K A -2.1016
78 N A -1.1120
79 T A 0.0000
80 L A 0.0000
81 Y A 0.0000
82 L A 0.0000
83 Q A -1.3169
84 M A 0.0000
85 N A -1.5613
86 S A -1.4753
87 L A 0.0000
88 R A -2.9833
89 A A -2.0637
90 E A -2.4937
91 D A 0.0000
92 T A -1.0156
93 A A 0.0000
94 V A -0.4583
95 Y A 0.0000
96 Y A 0.0293
97 S A 0.0000
98 A A 0.0000
99 S A 0.0000
100 T A 0.0000
101 A A -1.0533
102 G A -1.1331
103 N A -0.9442
104 M A 0.5850
105 Y A 1.7872
106 Y A 1.8605
107 G A 1.4747
108 L A 1.7461
109 R A 0.5662
110 G A -0.2243
111 P A -0.4569
112 A A -0.8497
113 D A -1.2548
114 F A 0.0000
115 D A -1.8121
116 Y A -0.6746
117 W A -0.0863
118 G A -0.0590
119 Q A -0.8699
120 G A -0.5492
121 T A 0.0000
122 Q A -1.0943
123 V A 0.0000
124 T A -0.3710
125 V A 0.0000
126 S A -0.7303
127 S A -0.4763
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Laboratory of Theory of Biopolymers 2018