| Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSSAASGYFYSSNYSLGWFRQAPGKGLEGVAQINIAPGRIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYSASTAGNMYYGLRGPADFDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.4410 | |
| 2 | V | A | -0.4738 | |
| 3 | Q | A | -0.9913 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.1288 | |
| 6 | E | A | 0.0294 | |
| 7 | S | A | -0.6761 | |
| 8 | G | A | -1.1487 | |
| 9 | G | A | -0.8597 | |
| 10 | G | A | -0.0543 | |
| 11 | L | A | 1.0056 | |
| 12 | V | A | -0.0940 | |
| 13 | Q | A | -1.4509 | |
| 14 | P | A | -1.8607 | |
| 15 | G | A | -1.6002 | |
| 16 | G | A | -1.0905 | |
| 17 | S | A | -1.3437 | |
| 18 | L | A | -0.9582 | |
| 19 | R | A | -2.1912 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4556 | |
| 22 | S | A | 0.0000 | |
| 23 | A | A | 0.0682 | |
| 24 | A | A | 0.1851 | |
| 25 | S | A | -0.2215 | |
| 26 | G | A | -0.4658 | |
| 27 | Y | A | 0.4961 | |
| 28 | F | A | 1.0669 | |
| 29 | Y | A | 0.0000 | |
| 30 | S | A | 0.1775 | |
| 31 | S | A | -0.1989 | |
| 32 | N | A | -0.5824 | |
| 33 | Y | A | -0.0364 | |
| 34 | S | A | 0.0000 | |
| 35 | L | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -1.0233 | |
| 41 | A | A | -1.4236 | |
| 42 | P | A | -1.3500 | |
| 43 | G | A | -1.5118 | |
| 44 | K | A | -2.2261 | |
| 45 | G | A | -1.2595 | |
| 46 | L | A | -0.1987 | |
| 47 | E | A | -0.4727 | |
| 48 | G | A | -0.1583 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | Q | A | 0.0000 | |
| 52 | I | A | 0.6256 | |
| 53 | N | A | 0.0000 | |
| 54 | I | A | 0.5146 | |
| 55 | A | A | 0.1951 | |
| 56 | P | A | -0.1151 | |
| 57 | G | A | -0.4791 | |
| 58 | R | A | -0.6607 | |
| 59 | I | A | 1.0348 | |
| 60 | Y | A | 0.6630 | |
| 61 | Y | A | -0.1502 | |
| 62 | A | A | 0.0000 | |
| 63 | D | A | -2.3913 | |
| 64 | S | A | -1.7602 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.5375 | |
| 67 | G | A | -1.7612 | |
| 68 | R | A | -1.5397 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.6225 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.2734 | |
| 73 | R | A | -0.8999 | |
| 74 | D | A | -1.7108 | |
| 75 | N | A | -1.3577 | |
| 76 | S | A | -1.3806 | |
| 77 | K | A | -2.1016 | |
| 78 | N | A | -1.1120 | |
| 79 | T | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | Y | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.3169 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.5613 | |
| 86 | S | A | -1.4753 | |
| 87 | L | A | 0.0000 | |
| 88 | R | A | -2.9833 | |
| 89 | A | A | -2.0637 | |
| 90 | E | A | -2.4937 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -1.0156 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | -0.4583 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.0293 | |
| 97 | S | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | T | A | 0.0000 | |
| 101 | A | A | -1.0533 | |
| 102 | G | A | -1.1331 | |
| 103 | N | A | -0.9442 | |
| 104 | M | A | 0.5850 | |
| 105 | Y | A | 1.7872 | |
| 106 | Y | A | 1.8605 | |
| 107 | G | A | 1.4747 | |
| 108 | L | A | 1.7461 | |
| 109 | R | A | 0.5662 | |
| 110 | G | A | -0.2243 | |
| 111 | P | A | -0.4569 | |
| 112 | A | A | -0.8497 | |
| 113 | D | A | -1.2548 | |
| 114 | F | A | 0.0000 | |
| 115 | D | A | -1.8121 | |
| 116 | Y | A | -0.6746 | |
| 117 | W | A | -0.0863 | |
| 118 | G | A | -0.0590 | |
| 119 | Q | A | -0.8699 | |
| 120 | G | A | -0.5492 | |
| 121 | T | A | 0.0000 | |
| 122 | Q | A | -1.0943 | |
| 123 | V | A | 0.0000 | |
| 124 | T | A | -0.3710 | |
| 125 | V | A | 0.0000 | |
| 126 | S | A | -0.7303 | |
| 127 | S | A | -0.4763 |