| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIIENGEVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLWNKLGDTENPTEYQHETADVRVSFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPSAPPPSPLYVPPPASSPYAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9414 | |
| 2 | L | A | 1.9641 | |
| 3 | P | A | 0.6607 | |
| 4 | P | A | 0.3557 | |
| 5 | T | A | 0.1147 | |
| 6 | T | A | 0.1231 | |
| 7 | P | A | 0.1452 | |
| 8 | V | A | 1.2367 | |
| 9 | A | A | 0.0774 | |
| 10 | K | A | -1.0448 | |
| 11 | V | A | -0.1945 | |
| 12 | Q | A | -1.4297 | |
| 13 | S | A | -1.5606 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4021 | |
| 16 | E | A | -2.4321 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4631 | |
| 20 | P | A | 0.1290 | |
| 21 | T | A | 0.1785 | |
| 22 | S | A | -0.0984 | |
| 23 | L | A | 0.1092 | |
| 24 | F | A | -0.0413 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3224 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9220 | |
| 31 | R | A | -2.7059 | |
| 32 | L | A | -0.8174 | |
| 33 | L | A | 1.1481 | |
| 34 | T | A | 1.3682 | |
| 35 | V | A | 1.8282 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2167 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6291 | |
| 40 | E | A | -1.6451 | |
| 41 | D | A | -0.8406 | |
| 42 | I | A | 0.7697 | |
| 43 | I | A | 1.0325 | |
| 44 | E | A | -1.2856 | |
| 45 | N | A | -1.9938 | |
| 46 | G | A | -1.3131 | |
| 47 | E | A | -1.1139 | |
| 48 | V | A | 1.2808 | |
| 49 | V | A | 1.7989 | |
| 50 | V | A | 1.1342 | |
| 51 | P | A | 0.4143 | |
| 52 | K | A | -0.6604 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1468 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3966 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2628 | |
| 70 | K | A | -1.7851 | |
| 71 | F | A | -0.6368 | |
| 72 | A | A | -0.5766 | |
| 73 | L | A | -0.8637 | |
| 74 | P | A | -1.2066 | |
| 75 | Q | A | -2.5071 | |
| 76 | K | A | -3.1117 | |
| 77 | D | A | -2.9919 | |
| 78 | F | A | -1.6587 | |
| 79 | Y | A | -1.8930 | |
| 80 | D | A | -2.6910 | |
| 81 | P | A | -2.3051 | |
| 82 | E | A | -3.0520 | |
| 83 | K | A | -3.3928 | |
| 84 | E | A | -2.4585 | |
| 85 | R | A | -1.2944 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6739 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9711 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3796 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7078 | |
| 99 | G | A | -0.5399 | |
| 100 | P | A | -0.4106 | |
| 101 | L | A | 0.0302 | |
| 102 | G | A | -0.2205 | |
| 103 | K | A | -0.5889 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3585 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1330 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3307 | |
| 110 | L | A | 0.3628 | |
| 111 | W | A | 0.0000 | |
| 112 | N | A | -1.0379 | |
| 113 | K | A | -0.5588 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4414 | |
| 117 | T | A | -1.0631 | |
| 118 | E | A | -1.7349 | |
| 119 | N | A | -2.1332 | |
| 120 | P | A | -1.9266 | |
| 121 | T | A | -1.5732 | |
| 122 | E | A | -2.2365 | |
| 123 | Y | A | -0.8979 | |
| 124 | Q | A | -1.7391 | |
| 125 | H | A | -1.7789 | |
| 126 | E | A | -2.3472 | |
| 127 | T | A | -1.6097 | |
| 128 | A | A | -1.1894 | |
| 129 | D | A | -2.0193 | |
| 130 | V | A | -1.3206 | |
| 131 | R | A | -0.8277 | |
| 132 | V | A | 0.2716 | |
| 133 | S | A | 0.1971 | |
| 134 | F | A | 0.1676 | |
| 135 | S | A | -0.0837 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5629 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1911 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1620 | |
| 157 | D | A | 0.3333 | |
| 158 | L | A | 0.8013 | |
| 159 | A | A | 0.1751 | |
| 160 | E | A | -1.4538 | |
| 161 | P | A | -0.2060 | |
| 162 | C | A | 0.1903 | |
| 163 | P | A | -0.1666 | |
| 164 | G | A | -0.0721 | |
| 165 | L | A | 0.6067 | |
| 166 | P | A | -0.1131 | |
| 167 | P | A | -0.3395 | |
| 168 | G | A | -0.4483 | |
| 169 | A | A | -0.0237 | |
| 170 | C | A | 0.6534 | |
| 171 | P | A | 0.5247 | |
| 172 | P | A | 0.7540 | |
| 173 | I | A | 1.9970 | |
| 174 | Q | A | 0.8418 | |
| 175 | L | A | 1.4788 | |
| 176 | V | A | 0.8516 | |
| 177 | N | A | -0.3036 | |
| 178 | S | A | 0.0230 | |
| 179 | V | A | 0.4270 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3810 | |
| 182 | D | A | 0.0768 | |
| 183 | G | A | -0.1587 | |
| 184 | D | A | -0.5344 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4545 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0898 | |
| 190 | F | A | 0.0298 | |
| 191 | G | A | -0.1546 | |
| 192 | N | A | -0.3006 | |
| 193 | M | A | -0.1246 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3880 | |
| 197 | E | A | -2.6044 | |
| 198 | L | A | -1.2305 | |
| 199 | Q | A | -2.5626 | |
| 200 | Q | A | -3.3157 | |
| 201 | D | A | -3.5803 | |
| 202 | R | A | -3.3198 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1954 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3461 | |
| 211 | S | A | -1.8866 | |
| 212 | T | A | -1.4068 | |
| 213 | R | A | -2.0457 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1971 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3513 | |
| 220 | L | A | 0.6188 | |
| 221 | K | A | -1.0847 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8063 | |
| 224 | N | A | -1.4847 | |
| 225 | E | A | -1.2297 | |
| 226 | A | A | -0.6093 | |
| 227 | Y | A | -0.3631 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6506 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0744 | |
| 234 | F | A | 0.2618 | |
| 235 | G | A | -0.8047 | |
| 236 | R | A | -2.5761 | |
| 237 | R | A | -2.8099 | |
| 238 | E | A | -2.0969 | |
| 239 | Q | A | -0.1714 | |
| 240 | V | A | 1.4453 | |
| 241 | Y | A | 1.1408 | |
| 242 | A | A | 0.2877 | |
| 243 | R | A | -0.7600 | |
| 244 | H | A | -0.7067 | |
| 245 | F | A | 0.1400 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6066 | |
| 249 | A | A | -1.2443 | |
| 250 | G | A | -1.0550 | |
| 251 | P | A | -1.1797 | |
| 252 | D | A | -1.3856 | |
| 253 | G | A | -1.2943 | |
| 254 | H | A | -1.4717 | |
| 255 | P | A | -1.0479 | |
| 256 | L | A | 0.1284 | |
| 257 | P | A | -0.0967 | |
| 258 | S | A | -0.1269 | |
| 259 | A | A | 0.1203 | |
| 260 | P | A | -0.3631 | |
| 261 | P | A | -0.0328 | |
| 262 | P | A | 0.0767 | |
| 263 | S | A | 0.5417 | |
| 264 | P | A | 0.7019 | |
| 265 | L | A | 1.9079 | |
| 266 | Y | A | 1.8355 | |
| 267 | V | A | 1.9888 | |
| 268 | P | A | 1.1471 | |
| 269 | P | A | 0.6932 | |
| 270 | P | A | -0.0187 | |
| 271 | A | A | 0.1618 | |
| 272 | S | A | -0.1787 | |
| 273 | S | A | 0.2940 | |
| 274 | P | A | 0.4122 | |
| 275 | Y | A | 1.3156 | |
| 276 | A | A | 1.1540 | |
| 277 | V | A | 1.8945 | |
| 278 | P | A | 0.9437 | |
| 279 | P | A | -0.2035 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5081 | |
| 282 | D | A | -0.9585 | |
| 283 | Y | A | 0.8557 | |
| 284 | F | A | 0.6923 | |
| 285 | G | A | 0.2999 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9694 | |
| 291 | L | A | 1.6189 | |
| 292 | V | A | 0.6277 | |
| 293 | S | A | -0.1618 | |
| 294 | S | A | -0.9642 | |
| 295 | D | A | -1.8426 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0861 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6375 | |
| 301 | R | A | -1.8325 | |
| 302 | P | A | -0.9667 | |
| 303 | F | A | -0.1891 | |
| 304 | W | A | -0.5692 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0889 | |
| 307 | R | A | -2.8381 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2731 | |
| 310 | G | A | -1.2312 | |
| 311 | N | A | -1.2790 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8508 | |
| 319 | N | A | -0.9480 | |
| 320 | E | A | -1.0428 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3440 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0648 | |
| 333 | N | A | 0.5747 | |
| 334 | F | A | 1.7741 | |
| 335 | T | A | 0.8747 | |
| 336 | I | A | 0.4117 | |
| 337 | S | A | -0.9757 | |
| 338 | Q | A | -1.6870 | |
| 339 | Q | A | -0.9749 | |
| 340 | L | A | 0.6198 | |
| 341 | S | A | 0.4304 | |
| 342 | T | A | 0.2398 | |
| 343 | P | A | 0.0968 | |
| 344 | L | A | 0.9768 | |
| 345 | P | A | 0.3284 | |
| 346 | N | A | -0.0324 | |
| 347 | V | A | 1.6537 | |
| 348 | Y | A | 1.4937 | |
| 349 | D | A | -0.0243 | |
| 350 | P | A | -0.7152 | |
| 351 | S | A | -0.5345 | |
| 352 | N | A | -0.1516 | |
| 353 | F | A | -0.8848 | |
| 354 | K | A | -1.9553 | |
| 355 | N | A | -1.8046 | |
| 356 | Y | A | -0.1406 | |
| 357 | L | A | 0.6462 | |
| 358 | R | A | 0.9789 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3825 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0949 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.1084 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7048 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3017 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3081 | |
| 376 | L | A | -1.7055 | |
| 377 | D | A | -1.9788 | |
| 378 | P | A | -1.0319 | |
| 379 | G | A | -1.0117 | |
| 380 | V | A | -0.9308 | |
| 381 | L | A | -0.5268 | |
| 382 | A | A | -0.6526 | |
| 383 | H | A | -0.8117 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4079 | |
| 386 | T | A | -0.5535 | |
| 387 | M | A | -0.3001 | |
| 388 | N | A | -0.8630 | |
| 389 | P | A | -1.2502 | |
| 390 | T | A | -1.4719 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4657 | |
| 393 | E | A | -2.8047 | |
| 394 | N | A | -2.4570 | |
| 395 | W | A | -1.4132 | |
| 396 | N | A | -1.1398 | |
| 397 | L | A | -0.2138 | |
| 398 | G | A | 0.4988 | |
| 399 | F | A | 2.4118 | |
| 400 | V | A | 1.8137 | |
| 401 | P | A | 0.0440 | |
| 402 | P | A | -1.8755 | |
| 403 | K | A | -3.3501 | |
| 404 | E | A | -3.8308 | |
| 405 | R | A | -4.0301 | |
| 406 | E | A | -3.8456 | |
| 407 | D | A | -2.8952 | |
| 408 | P | A | -1.7763 | |
| 409 | Y | A | -0.9844 | |
| 410 | K | A | -2.1234 | |
| 411 | G | A | -0.6403 | |
| 412 | L | A | 0.6722 | |
| 413 | I | A | 1.5867 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3901 | |
| 416 | E | A | -1.6869 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9590 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0731 | |
| 421 | E | A | -2.8198 | |
| 422 | R | A | -2.7110 | |
| 423 | F | A | -1.3223 | |
| 424 | S | A | -1.4936 | |
| 425 | Q | A | -1.8642 | |
| 426 | D | A | -2.8999 | |
| 427 | L | A | -1.9887 | |
| 428 | D | A | -2.7772 | |
| 429 | Q | A | -2.6197 | |
| 430 | F | A | -1.4305 | |
| 431 | A | A | -0.8998 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5808 | |
| 435 | K | A | -0.7139 | |
| 436 | F | A | 0.1373 | |
| 437 | L | A | 1.0275 | |
| 438 | Y | A | 0.8238 | |
| 439 | Q | A | -0.2772 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine