| Chain sequence(s) |
A: MSHHHHHHSGKVEEIKKILEELKKLKEVVEEAEEILKEVEEKGVDVVYAFGKIYRKFKDFAKTAKEKEVKELVKEILEILNKINNSWFFYEYYYGNKELVYKKVKDAVEEIKKKVEEEIKKYEEELKKAENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:17)
[INFO] Main: Simulation completed successfully. (00:09:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2357 | |
| 2 | S | A | -0.9499 | |
| 3 | H | A | -2.1662 | |
| 4 | H | A | -2.5701 | |
| 5 | H | A | -2.8223 | |
| 6 | H | A | -3.1990 | |
| 7 | H | A | -3.0960 | |
| 8 | H | A | -3.2194 | |
| 9 | S | A | -2.5218 | |
| 10 | G | A | -2.7679 | |
| 11 | K | A | -3.2217 | |
| 12 | V | A | -1.8341 | |
| 13 | E | A | -3.3166 | |
| 14 | E | A | -3.5496 | |
| 15 | I | A | -1.8353 | |
| 16 | K | A | -3.1449 | |
| 17 | K | A | -3.6631 | |
| 18 | I | A | -2.5606 | |
| 19 | L | A | -1.6810 | |
| 20 | E | A | -3.3110 | |
| 21 | E | A | 0.0000 | |
| 22 | L | A | -2.2504 | |
| 23 | K | A | -3.5757 | |
| 24 | K | A | -3.5517 | |
| 25 | L | A | 0.0000 | |
| 26 | K | A | -3.9299 | |
| 27 | E | A | -4.1693 | |
| 28 | V | A | -2.8806 | |
| 29 | V | A | -2.6812 | |
| 30 | E | A | -3.8609 | |
| 31 | E | A | -3.4647 | |
| 32 | A | A | 0.0000 | |
| 33 | E | A | -3.6113 | |
| 34 | E | A | -3.7618 | |
| 35 | I | A | -1.9238 | |
| 36 | L | A | -1.9423 | |
| 37 | K | A | -3.7140 | |
| 38 | E | A | -3.3336 | |
| 39 | V | A | -2.0739 | |
| 40 | E | A | -3.6643 | |
| 41 | E | A | -4.0510 | |
| 42 | K | A | -3.6133 | |
| 43 | G | A | -2.2705 | |
| 44 | V | A | -1.0733 | |
| 45 | D | A | -0.1382 | |
| 46 | V | A | 0.9487 | |
| 47 | V | A | 0.0000 | |
| 48 | Y | A | 0.5454 | |
| 49 | A | A | 0.0000 | |
| 50 | F | A | 0.0000 | |
| 51 | G | A | -0.3498 | |
| 52 | K | A | -1.5877 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | -1.4899 | |
| 55 | R | A | -2.8963 | |
| 56 | K | A | -2.0930 | |
| 57 | F | A | 0.0000 | |
| 58 | K | A | -2.9364 | |
| 59 | D | A | -2.4513 | |
| 60 | F | A | 0.0000 | |
| 61 | A | A | -2.6107 | |
| 62 | K | A | -2.6080 | |
| 63 | T | A | -1.7696 | |
| 64 | A | A | 0.0000 | |
| 65 | K | A | -3.1648 | |
| 66 | E | A | -3.4528 | |
| 67 | K | A | -3.8538 | |
| 68 | E | A | -3.7913 | |
| 69 | V | A | 0.0000 | |
| 70 | K | A | -4.0739 | |
| 71 | E | A | -4.0837 | |
| 72 | L | A | -2.4674 | |
| 73 | V | A | 0.0000 | |
| 74 | K | A | -3.7626 | |
| 75 | E | A | -3.1923 | |
| 76 | I | A | -1.5715 | |
| 77 | L | A | -2.1641 | |
| 78 | E | A | -2.5332 | |
| 79 | I | A | -0.6559 | |
| 80 | L | A | -0.7285 | |
| 81 | N | A | -1.3539 | |
| 82 | K | A | -1.8722 | |
| 83 | I | A | -0.2803 | |
| 84 | N | A | 0.0000 | |
| 85 | N | A | -0.7964 | |
| 86 | S | A | 0.0253 | |
| 87 | W | A | 1.2637 | |
| 88 | F | A | 2.5852 | |
| 89 | F | A | 3.1841 | |
| 90 | Y | A | 2.1361 | |
| 91 | E | A | 1.3337 | |
| 92 | Y | A | 2.1863 | |
| 93 | Y | A | 1.5007 | |
| 94 | Y | A | 0.7170 | |
| 95 | G | A | -0.2396 | |
| 96 | N | A | -0.4914 | |
| 97 | K | A | -1.1933 | |
| 98 | E | A | -1.6766 | |
| 99 | L | A | -0.4731 | |
| 100 | V | A | -0.4468 | |
| 101 | Y | A | -0.4055 | |
| 102 | K | A | -2.1234 | |
| 103 | K | A | -2.1333 | |
| 104 | V | A | -0.3812 | |
| 105 | K | A | -2.0431 | |
| 106 | D | A | -3.2235 | |
| 107 | A | A | -1.7581 | |
| 108 | V | A | -1.4663 | |
| 109 | E | A | -3.1516 | |
| 110 | E | A | -3.0869 | |
| 111 | I | A | -1.4657 | |
| 112 | K | A | -3.3530 | |
| 113 | K | A | -4.0830 | |
| 114 | K | A | -3.6429 | |
| 115 | V | A | -2.0021 | |
| 116 | E | A | -3.2846 | |
| 117 | E | A | -4.3188 | |
| 118 | E | A | -3.6658 | |
| 119 | I | A | -1.6935 | |
| 120 | K | A | -3.7544 | |
| 121 | K | A | -3.6475 | |
| 122 | Y | A | -2.2517 | |
| 123 | E | A | -3.5597 | |
| 124 | E | A | -4.3097 | |
| 125 | E | A | -3.6608 | |
| 126 | L | A | -2.4396 | |
| 127 | K | A | -3.9847 | |
| 128 | K | A | -4.0812 | |
| 129 | A | A | -2.8664 | |
| 130 | E | A | -3.3163 | |
| 131 | N | A | -3.1527 | |
| 132 | S | A | -1.8747 |