| Chain sequence(s) |
A: QVQLVESGGALVQPGGSLRLSCAASGRGADTLSLRWYRQAPGKEREWVCGISWLMTTYSYEDSVKGRFTCSRDDARNTVYLQLNSLKPEDTAVYYCASRPRFLEEQLQVSSYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.0109 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.1623 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.8110 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.6038 | |
| 8 | G | A | -1.1417 | |
| 9 | G | A | -0.6828 | |
| 10 | A | A | 0.1507 | |
| 11 | L | A | 1.1757 | |
| 12 | V | A | 0.0427 | |
| 13 | Q | A | -1.3131 | |
| 14 | P | A | -1.5816 | |
| 15 | G | A | -1.3995 | |
| 16 | G | A | -0.9448 | |
| 17 | S | A | -1.2957 | |
| 18 | L | A | -1.0237 | |
| 19 | R | A | -2.2231 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4381 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1970 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.6398 | |
| 26 | G | A | -2.3486 | |
| 27 | R | A | -2.8733 | |
| 28 | G | A | -2.1463 | |
| 29 | A | A | 0.0000 | |
| 30 | D | A | -3.0835 | |
| 31 | T | A | -1.5465 | |
| 32 | L | A | 0.0000 | |
| 33 | S | A | -0.5791 | |
| 34 | L | A | 0.0000 | |
| 35 | R | A | -1.0695 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.5792 | |
| 38 | R | A | -1.1723 | |
| 39 | Q | A | -1.9928 | |
| 40 | A | A | -2.0272 | |
| 41 | P | A | -1.5954 | |
| 42 | G | A | -1.9443 | |
| 43 | K | A | -3.3629 | |
| 44 | E | A | -3.4784 | |
| 45 | R | A | -2.5561 | |
| 46 | E | A | -1.9156 | |
| 47 | W | A | -0.4973 | |
| 48 | V | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | G | A | -0.1070 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 1.1412 | |
| 53 | W | A | 1.7752 | |
| 54 | L | A | 2.4132 | |
| 55 | M | A | 1.8976 | |
| 56 | T | A | 1.1344 | |
| 57 | T | A | 0.8807 | |
| 58 | Y | A | 0.7267 | |
| 59 | S | A | -0.1857 | |
| 60 | Y | A | -0.8642 | |
| 61 | E | A | -1.5431 | |
| 62 | D | A | -2.6271 | |
| 63 | S | A | -1.9060 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.7178 | |
| 66 | G | A | -1.7631 | |
| 67 | R | A | -1.3385 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.8473 | |
| 70 | C | A | 0.0000 | |
| 71 | S | A | -0.3449 | |
| 72 | R | A | -0.9153 | |
| 73 | D | A | -1.9368 | |
| 74 | D | A | -3.0391 | |
| 75 | A | A | -2.1542 | |
| 76 | R | A | -2.8798 | |
| 77 | N | A | -2.4274 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.7589 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.4973 | |
| 83 | L | A | 0.0000 | |
| 84 | N | A | -1.3770 | |
| 85 | S | A | -1.2083 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.3046 | |
| 88 | P | A | -1.8856 | |
| 89 | E | A | -2.3630 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8908 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4399 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.3133 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | S | A | 0.0000 | |
| 99 | R | A | -0.7669 | |
| 100 | P | A | -0.8562 | |
| 101 | R | A | -1.3063 | |
| 102 | F | A | 0.6080 | |
| 103 | L | A | -0.6637 | |
| 104 | E | A | -2.6017 | |
| 105 | E | A | -2.8267 | |
| 106 | Q | A | -2.2940 | |
| 107 | L | A | -0.4786 | |
| 108 | Q | A | -1.2247 | |
| 109 | V | A | -0.4427 | |
| 110 | S | A | -0.0990 | |
| 111 | S | A | -0.1500 | |
| 112 | Y | A | 0.1737 | |
| 113 | W | A | 0.3337 | |
| 114 | G | A | 0.0129 | |
| 115 | Q | A | -0.8945 | |
| 116 | G | A | 0.0000 | |
| 117 | T | A | -0.6900 | |
| 118 | Q | A | -1.0614 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | -0.1784 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.6626 | |
| 123 | S | A | -0.9007 |