Project name: query_structure

Status: done

Started: 2026-03-17 00:36:29
Settings
Chain sequence(s) A: QVQLVESGGALVQPGGSLRLSCAASGRGADTLSLRWYRQAPGKEREWVCGISWLMTTYSYEDSVKGRFTCSRDDARNTVYLQLNSLKPEDTAVYYCASRPRFLEEQLQVSSYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:46)
Show buried residues

Minimal score value
-3.4784
Maximal score value
2.4132
Average score
-0.7958
Total score value
-97.8829

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -2.0109
2 V A 0.0000
3 Q A -1.1623
4 L A 0.0000
5 V A 0.8110
6 E A 0.0000
7 S A -0.6038
8 G A -1.1417
9 G A -0.6828
10 A A 0.1507
11 L A 1.1757
12 V A 0.0427
13 Q A -1.3131
14 P A -1.5816
15 G A -1.3995
16 G A -0.9448
17 S A -1.2957
18 L A -1.0237
19 R A -2.2231
20 L A 0.0000
21 S A -0.4381
22 C A 0.0000
23 A A -0.1970
24 A A 0.0000
25 S A -1.6398
26 G A -2.3486
27 R A -2.8733
28 G A -2.1463
29 A A 0.0000
30 D A -3.0835
31 T A -1.5465
32 L A 0.0000
33 S A -0.5791
34 L A 0.0000
35 R A -1.0695
36 W A 0.0000
37 Y A -0.5792
38 R A -1.1723
39 Q A -1.9928
40 A A -2.0272
41 P A -1.5954
42 G A -1.9443
43 K A -3.3629
44 E A -3.4784
45 R A -2.5561
46 E A -1.9156
47 W A -0.4973
48 V A 0.0000
49 C A 0.0000
50 G A -0.1070
51 I A 0.0000
52 S A 1.1412
53 W A 1.7752
54 L A 2.4132
55 M A 1.8976
56 T A 1.1344
57 T A 0.8807
58 Y A 0.7267
59 S A -0.1857
60 Y A -0.8642
61 E A -1.5431
62 D A -2.6271
63 S A -1.9060
64 V A 0.0000
65 K A -2.7178
66 G A -1.7631
67 R A -1.3385
68 F A 0.0000
69 T A -0.8473
70 C A 0.0000
71 S A -0.3449
72 R A -0.9153
73 D A -1.9368
74 D A -3.0391
75 A A -2.1542
76 R A -2.8798
77 N A -2.4274
78 T A 0.0000
79 V A 0.0000
80 Y A -0.7589
81 L A 0.0000
82 Q A -1.4973
83 L A 0.0000
84 N A -1.3770
85 S A -1.2083
86 L A 0.0000
87 K A -2.3046
88 P A -1.8856
89 E A -2.3630
90 D A 0.0000
91 T A -0.8908
92 A A 0.0000
93 V A -0.4399
94 Y A 0.0000
95 Y A -0.3133
96 C A 0.0000
97 A A 0.0000
98 S A 0.0000
99 R A -0.7669
100 P A -0.8562
101 R A -1.3063
102 F A 0.6080
103 L A -0.6637
104 E A -2.6017
105 E A -2.8267
106 Q A -2.2940
107 L A -0.4786
108 Q A -1.2247
109 V A -0.4427
110 S A -0.0990
111 S A -0.1500
112 Y A 0.1737
113 W A 0.3337
114 G A 0.0129
115 Q A -0.8945
116 G A 0.0000
117 T A -0.6900
118 Q A -1.0614
119 V A 0.0000
120 T A -0.1784
121 V A 0.0000
122 S A -0.6626
123 S A -0.9007
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Laboratory of Theory of Biopolymers 2018