Project name: 16.P1B9.pdb

Status: done

Started: 2026-03-19 12:36:09
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Chain sequence(s) H: EVQLVESGGGLVQAGGSLRLSCAASKNIFSINAMNWYRQAPGKERELVAVITGGGTTNYADSVKGRFTISKDNAKNTGYLQMDSLKPEDTAVYYCQAYMRGYGRHFWGQGIQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-2.7919
Maximal score value
1.27
Average score
-0.7215
Total score value
-84.4167

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.3115
2 V H 0.0000
3 Q H -1.5187
4 L H 0.0000
5 V H 1.2700
6 E H 0.0000
7 S H -0.2358
8 G H -1.0139
9 G H -0.5441
11 G H 0.1226
12 L H 1.1649
13 V H 0.0980
14 Q H -1.2161
15 A H -1.3722
16 G H -1.3293
17 G H -0.8852
18 S H -1.1393
19 L H -0.7520
20 R H -1.7641
21 L H 0.0000
22 S H -0.2132
23 C H 0.0000
24 A H -0.2967
25 A H 0.0000
26 S H -1.3716
27 K H -2.1099
28 N H -1.2090
29 I H -0.2219
30 F H 0.8719
35 S H -0.2449
36 I H 0.0000
37 N H -0.9756
38 A H -0.6579
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 Y H 0.4034
43 R H 0.0000
44 Q H -1.1949
45 A H -1.2599
46 P H -1.0232
47 G H -1.4475
48 K H -2.2047
49 E H -2.7188
50 R H -1.7309
51 E H -1.0516
52 L H 0.1868
53 V H 0.0000
54 A H 0.0000
55 V H -0.0230
56 I H 0.0000
57 T H -0.7217
58 G H -0.7435
59 G H -0.8932
63 G H -0.7437
64 T H -0.6717
65 T H -0.7536
66 N H -1.4468
67 Y H -1.2612
68 A H -1.4189
69 D H -2.6163
70 S H -1.7216
71 V H 0.0000
72 K H -2.7919
74 G H -1.7811
75 R H -1.6745
76 F H 0.0000
77 T H -0.9358
78 I H 0.0000
79 S H -0.4724
80 K H -1.2783
81 D H -1.8544
82 N H -2.0172
83 A H -1.6736
84 K H -2.4627
85 N H -1.9796
86 T H 0.0000
87 G H 0.0000
88 Y H -0.3939
89 L H 0.0000
90 Q H -1.0426
91 M H 0.0000
92 D H -1.4287
93 S H -1.2537
94 L H 0.0000
95 K H -2.0912
96 P H -1.6126
97 E H -1.8570
98 D H 0.0000
99 T H -0.6469
100 A H 0.0000
101 V H -0.0659
102 Y H 0.0000
103 Y H 0.3168
104 C H 0.0000
105 Q H 0.0000
106 A H 0.0000
107 Y H -1.0282
108 M H -1.1541
109 R H -2.0918
110 G H -1.0246
113 Y H 0.0979
114 G H -1.2931
115 R H -1.6907
116 H H -1.4344
117 F H 0.0000
118 W H 0.3056
119 G H 0.0023
120 Q H -0.7015
121 G H -0.1460
122 I H -0.2219
123 Q H -0.4446
124 V H 0.0000
125 T H -0.0977
126 V H 0.0000
127 S H -0.7236
128 S H -0.8611
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Laboratory of Theory of Biopolymers 2018