| Chain sequence(s) |
A: EVQLLESGGGLVQPGGSLRLSCAVSGFTFNSFAMSWVRQAPGKGLEWVSAISGSGGGTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYFCAKDKILWFGEPVFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:31)
[INFO] Main: Simulation completed successfully. (00:07:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1048 | |
| 2 | V | A | -1.1993 | |
| 3 | Q | A | -1.1376 | |
| 4 | L | A | 0.0000 | |
| 5 | L | A | 0.8997 | |
| 6 | E | A | 0.0914 | |
| 7 | S | A | -0.3344 | |
| 8 | G | A | -0.9131 | |
| 9 | G | A | -0.3832 | |
| 10 | G | A | -0.3078 | |
| 11 | L | A | -0.1705 | |
| 12 | V | A | -0.6104 | |
| 13 | Q | A | -1.6356 | |
| 14 | P | A | -1.8640 | |
| 15 | G | A | -1.5436 | |
| 16 | G | A | -1.1297 | |
| 17 | S | A | -1.3149 | |
| 18 | L | A | -1.1635 | |
| 19 | R | A | -2.1132 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4662 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1789 | |
| 24 | V | A | 0.0000 | |
| 25 | S | A | -0.8122 | |
| 26 | G | A | -1.1862 | |
| 27 | F | A | -0.4996 | |
| 28 | T | A | -0.4750 | |
| 29 | F | A | 0.0000 | |
| 30 | N | A | -1.5900 | |
| 31 | S | A | -0.5454 | |
| 32 | F | A | 0.3009 | |
| 33 | A | A | 0.0856 | |
| 34 | M | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.5832 | |
| 40 | A | A | -1.1454 | |
| 41 | P | A | -0.9871 | |
| 42 | G | A | -1.4420 | |
| 43 | K | A | -2.1570 | |
| 44 | G | A | -1.0354 | |
| 45 | L | A | 0.3247 | |
| 46 | E | A | -0.4342 | |
| 47 | W | A | 0.0795 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | -0.3099 | |
| 53 | G | A | -0.7365 | |
| 54 | S | A | -0.9491 | |
| 55 | G | A | -0.9529 | |
| 56 | G | A | -0.7211 | |
| 57 | G | A | -0.1653 | |
| 58 | T | A | 0.4374 | |
| 59 | Y | A | 0.9376 | |
| 60 | Y | A | -0.1677 | |
| 61 | A | A | -1.0456 | |
| 62 | D | A | -2.2435 | |
| 63 | S | A | -1.7979 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.4245 | |
| 66 | G | A | -1.7688 | |
| 67 | R | A | -1.5462 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.6952 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5199 | |
| 72 | R | A | -1.2408 | |
| 73 | D | A | -1.9426 | |
| 74 | N | A | -2.2024 | |
| 75 | S | A | -1.8268 | |
| 76 | K | A | -2.4212 | |
| 77 | N | A | -1.9959 | |
| 78 | T | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6525 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2441 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.5611 | |
| 85 | S | A | -1.4407 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.8451 | |
| 88 | A | A | -1.9764 | |
| 89 | E | A | -2.4154 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8172 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.4381 | |
| 94 | Y | A | 0.0000 | |
| 95 | F | A | 0.3422 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | K | A | 0.0000 | |
| 99 | D | A | 0.1935 | |
| 100 | K | A | 0.0797 | |
| 101 | I | A | 1.7830 | |
| 102 | L | A | 1.5835 | |
| 103 | W | A | 2.1440 | |
| 104 | F | A | 2.1191 | |
| 105 | G | A | 0.4894 | |
| 106 | E | A | -0.7004 | |
| 107 | P | A | -0.1317 | |
| 108 | V | A | 0.0392 | |
| 109 | F | A | 0.1147 | |
| 110 | D | A | -0.9528 | |
| 111 | Y | A | -0.1048 | |
| 112 | W | A | 0.1958 | |
| 113 | G | A | -0.0533 | |
| 114 | Q | A | -0.8925 | |
| 115 | G | A | -0.1965 | |
| 116 | T | A | 0.0864 | |
| 117 | L | A | 0.3276 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | -0.4660 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -1.0046 | |
| 122 | S | A | -0.6868 | |
| 123 | A | A | -0.4941 | |
| 124 | S | A | -0.6358 | |
| 125 | T | A | -0.7416 | |
| 126 | K | A | -1.2852 | |
| 127 | G | A | -1.5352 | |
| 128 | P | A | 0.0000 | |
| 129 | S | A | -0.2708 | |
| 130 | V | A | 0.0000 | |
| 131 | F | A | 0.5299 | |
| 132 | P | A | -0.1661 | |
| 133 | L | A | 0.4228 | |
| 134 | A | A | -0.7394 | |
| 135 | P | A | -0.8094 | |
| 136 | S | A | -0.9725 | |
| 137 | S | A | -1.3636 | |
| 138 | K | A | -2.0080 | |
| 139 | S | A | -1.4017 | |
| 140 | T | A | -1.1349 | |
| 141 | S | A | -1.0386 | |
| 142 | G | A | -0.9066 | |
| 143 | G | A | -0.9335 | |
| 144 | T | A | -0.6318 | |
| 145 | A | A | 0.0000 | |
| 146 | A | A | 0.1236 | |
| 147 | L | A | 0.0000 | |
| 148 | G | A | 0.0000 | |
| 149 | C | A | 0.0000 | |
| 150 | L | A | 0.6249 | |
| 151 | V | A | 0.0000 | |
| 152 | K | A | -0.3448 | |
| 153 | D | A | -0.3406 | |
| 154 | Y | A | 0.0000 | |
| 155 | F | A | 0.0000 | |
| 156 | P | A | 0.0000 | |
| 157 | E | A | -0.6538 | |
| 158 | P | A | -0.9729 | |
| 159 | V | A | -0.9005 | |
| 160 | T | A | -0.7793 | |
| 161 | V | A | -0.2103 | |
| 162 | S | A | -0.4071 | |
| 163 | W | A | 0.0000 | |
| 164 | N | A | -0.7725 | |
| 165 | S | A | -0.5984 | |
| 166 | G | A | -0.4647 | |
| 167 | A | A | -0.2145 | |
| 168 | L | A | 0.0087 | |
| 169 | T | A | -0.2746 | |
| 170 | S | A | -0.3222 | |
| 171 | G | A | -0.3746 | |
| 172 | V | A | -0.0315 | |
| 173 | H | A | -0.4732 | |
| 174 | T | A | 0.3161 | |
| 175 | F | A | 1.3535 | |
| 176 | P | A | 0.7510 | |
| 177 | A | A | 1.2264 | |
| 178 | V | A | 2.3770 | |
| 179 | L | A | 2.0252 | |
| 180 | Q | A | 0.4434 | |
| 181 | S | A | -0.0651 | |
| 182 | S | A | -0.2961 | |
| 183 | G | A | 0.1379 | |
| 184 | L | A | 0.1645 | |
| 185 | Y | A | 0.6614 | |
| 186 | S | A | 0.0000 | |
| 187 | L | A | 0.0000 | |
| 188 | S | A | 0.7560 | |
| 189 | S | A | 0.0000 | |
| 190 | V | A | 0.4383 | |
| 191 | V | A | 0.0000 | |
| 192 | T | A | -0.2190 | |
| 193 | V | A | 0.0000 | |
| 194 | P | A | -0.5158 | |
| 195 | S | A | -0.5603 | |
| 196 | S | A | -0.5764 | |
| 197 | S | A | -0.6028 | |
| 198 | L | A | -0.7058 | |
| 199 | G | A | -1.3111 | |
| 200 | T | A | -0.8487 | |
| 201 | Q | A | -1.5078 | |
| 202 | T | A | -1.3410 | |
| 203 | Y | A | 0.0000 | |
| 204 | I | A | -1.3929 | |
| 205 | C | A | 0.0000 | |
| 206 | N | A | -1.4372 | |
| 207 | V | A | 0.0000 | |
| 208 | N | A | -2.2064 | |
| 209 | H | A | 0.0000 | |
| 210 | K | A | -2.8343 | |
| 211 | P | A | -1.6873 | |
| 212 | S | A | -1.8568 | |
| 213 | N | A | -2.6759 | |
| 214 | T | A | -2.1912 | |
| 215 | K | A | -2.7473 | |
| 216 | V | A | -1.5799 | |
| 217 | D | A | -2.2065 | |
| 218 | K | A | -2.1070 | |
| 219 | R | A | -2.5965 | |
| 220 | V | A | 0.0000 | |
| 221 | E | A | -2.9647 | |
| 222 | P | A | -1.9880 | |
| 223 | K | A | -2.4230 | |
| 224 | S | A | -1.8763 | |
| 225 | C | A | -1.4420 | |
| 226 | D | A | -2.7547 | |
| 227 | K | A | -2.5968 | |
| 228 | T | A | -1.8049 | |
| 229 | H | A | -1.6480 | |
| 230 | T | A | -0.7603 | |
| 231 | C | A | -0.1236 | |
| 232 | P | A | -0.1010 | |
| 233 | P | A | 0.2943 | |
| 234 | C | A | 0.6405 | |
| 235 | P | A | -0.4039 | |
| 236 | A | A | -0.5219 | |
| 237 | P | A | -0.7065 | |
| 238 | E | A | -1.2996 | |
| 239 | L | A | 0.0729 | |
| 240 | L | A | 0.9831 | |
| 241 | G | A | 0.0634 | |
| 242 | G | A | -0.3581 | |
| 243 | P | A | 0.0000 | |
| 244 | S | A | -0.0025 | |
| 245 | V | A | 0.0000 | |
| 246 | F | A | 1.0916 | |
| 247 | L | A | 0.8491 | |
| 248 | F | A | 1.0823 | |
| 249 | P | A | -0.1820 | |
| 250 | P | A | 0.0000 | |
| 251 | K | A | -2.0064 | |
| 252 | P | A | -1.2719 | |
| 253 | K | A | -1.1640 | |
| 254 | D | A | 0.0000 | |
| 255 | T | A | 0.0000 | |
| 256 | L | A | 0.0000 | |
| 257 | M | A | 0.2640 | |
| 258 | I | A | 1.3350 | |
| 259 | S | A | -0.0480 | |
| 260 | R | A | -1.4255 | |
| 261 | T | A | -0.8937 | |
| 262 | P | A | 0.0000 | |
| 263 | E | A | -1.1774 | |
| 264 | V | A | 0.0000 | |
| 265 | T | A | 0.0181 | |
| 266 | C | A | 0.0000 | |
| 267 | V | A | 0.0000 | |
| 268 | V | A | 0.0000 | |
| 269 | V | A | -0.5231 | |
| 270 | D | A | -0.9402 | |
| 271 | V | A | 0.0000 | |
| 272 | S | A | -1.9558 | |
| 273 | H | A | -2.4936 | |
| 274 | E | A | -2.9341 | |
| 275 | D | A | -2.5272 | |
| 276 | P | A | -2.5155 | |
| 277 | E | A | -2.9130 | |
| 278 | V | A | -1.9211 | |
| 279 | K | A | -2.2385 | |
| 280 | F | A | -1.3501 | |
| 281 | N | A | -1.3302 | |
| 282 | W | A | 0.0000 | |
| 283 | Y | A | -0.9234 | |
| 284 | V | A | -0.9511 | |
| 285 | D | A | -2.0957 | |
| 286 | G | A | -1.0069 | |
| 287 | V | A | 0.2308 | |
| 288 | E | A | -1.4072 | |
| 289 | V | A | -0.8682 | |
| 290 | H | A | -2.0143 | |
| 291 | N | A | -2.1652 | |
| 292 | A | A | -1.8700 | |
| 293 | K | A | -2.4218 | |
| 294 | T | A | -1.8681 | |
| 295 | K | A | -2.2657 | |
| 296 | P | A | -2.1953 | |
| 297 | R | A | -3.1080 | |
| 298 | E | A | -3.5627 | |
| 299 | E | A | -3.1742 | |
| 300 | Q | A | -1.4533 | |
| 301 | Y | A | 0.5256 | |
| 302 | N | A | -0.0224 | |
| 303 | S | A | -0.8268 | |
| 304 | T | A | 0.0000 | |
| 305 | Y | A | -2.3157 | |
| 306 | R | A | -2.3859 | |
| 307 | V | A | 0.0000 | |
| 308 | V | A | -0.9009 | |
| 309 | S | A | 0.0000 | |
| 310 | V | A | 0.0000 | |
| 311 | L | A | 0.0000 | |
| 312 | T | A | -0.6674 | |
| 313 | V | A | -0.1000 | |
| 314 | L | A | 0.4694 | |
| 315 | H | A | -0.3324 | |
| 316 | Q | A | -1.3203 | |
| 317 | D | A | -1.5103 | |
| 318 | W | A | 0.0000 | |
| 319 | L | A | -1.0721 | |
| 320 | N | A | -2.1842 | |
| 321 | G | A | -2.1298 | |
| 322 | K | A | -2.2162 | |
| 323 | E | A | -2.1619 | |
| 324 | Y | A | 0.0000 | |
| 325 | K | A | -1.6760 | |
| 326 | C | A | 0.0000 | |
| 327 | K | A | -1.5826 | |
| 328 | V | A | 0.0000 | |
| 329 | S | A | -1.4699 | |
| 330 | N | A | 0.0000 | |
| 331 | K | A | -2.5486 | |
| 332 | A | A | -1.5046 | |
| 333 | L | A | -0.6375 | |
| 334 | P | A | -0.4957 | |
| 335 | A | A | -0.4213 | |
| 336 | P | A | -0.8812 | |
| 337 | I | A | -0.6243 | |
| 338 | E | A | -1.9709 | |
| 339 | K | A | -1.2182 | |
| 340 | T | A | -1.0070 | |
| 341 | I | A | -0.2401 | |
| 342 | S | A | -1.2266 | |
| 343 | K | A | -1.3915 | |
| 344 | A | A | -1.1959 | |
| 345 | K | A | -2.3757 | |
| 346 | G | A | -2.0766 | |
| 347 | Q | A | -2.2942 | |
| 348 | P | A | -2.0724 | |
| 349 | R | A | -2.7262 | |
| 350 | E | A | -2.9091 | |
| 351 | P | A | 0.0000 | |
| 352 | Q | A | -1.4965 | |
| 353 | V | A | 0.0000 | |
| 354 | Y | A | 0.6103 | |
| 355 | T | A | 0.4434 | |
| 356 | L | A | 0.8351 | |
| 357 | P | A | -0.0481 | |
| 358 | P | A | -0.9851 | |
| 359 | S | A | -1.7069 | |
| 360 | R | A | -3.0920 | |
| 361 | E | A | -3.2008 | |
| 362 | E | A | -2.8701 | |
| 363 | M | A | -2.5684 | |
| 364 | T | A | -2.3077 | |
| 365 | K | A | -3.5690 | |
| 366 | N | A | -3.3030 | |
| 367 | Q | A | -3.2977 | |
| 368 | V | A | 0.0000 | |
| 369 | S | A | -0.8754 | |
| 370 | L | A | 0.0000 | |
| 371 | T | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | L | A | 0.4663 | |
| 374 | V | A | 0.0000 | |
| 375 | K | A | -0.7424 | |
| 376 | G | A | -1.4053 | |
| 377 | F | A | 0.0000 | |
| 378 | Y | A | -1.1191 | |
| 379 | P | A | 0.0000 | |
| 380 | S | A | 0.1684 | |
| 381 | D | A | -0.8732 | |
| 382 | I | A | -0.4715 | |
| 383 | A | A | 0.0000 | |
| 384 | V | A | 0.0000 | |
| 385 | E | A | -1.1254 | |
| 386 | W | A | 0.0000 | |
| 387 | E | A | -1.7882 | |
| 388 | S | A | 0.0000 | |
| 389 | N | A | -1.7898 | |
| 390 | G | A | -1.7511 | |
| 391 | Q | A | -2.3299 | |
| 392 | P | A | -2.0393 | |
| 393 | E | A | -2.0593 | |
| 394 | N | A | -2.5319 | |
| 395 | N | A | -2.4387 | |
| 396 | Y | A | -2.1629 | |
| 397 | K | A | -2.4581 | |
| 398 | T | A | -1.0765 | |
| 399 | T | A | -0.3434 | |
| 400 | P | A | 0.1205 | |
| 401 | P | A | 0.7936 | |
| 402 | V | A | 1.7495 | |
| 403 | L | A | 1.3751 | |
| 404 | D | A | -0.5112 | |
| 405 | S | A | -1.1089 | |
| 406 | D | A | -2.0692 | |
| 407 | G | A | -0.9441 | |
| 408 | S | A | 0.0000 | |
| 409 | F | A | 0.3947 | |
| 410 | F | A | 0.7200 | |
| 411 | L | A | 0.0000 | |
| 412 | Y | A | 0.2511 | |
| 413 | S | A | 0.0000 | |
| 414 | K | A | -1.6459 | |
| 415 | L | A | 0.0000 | |
| 416 | T | A | -1.7079 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -3.1530 | |
| 419 | K | A | -3.2525 | |
| 420 | S | A | -2.4696 | |
| 421 | R | A | -2.1532 | |
| 422 | W | A | 0.0000 | |
| 423 | Q | A | -2.4443 | |
| 424 | Q | A | -2.0725 | |
| 425 | G | A | -1.0831 | |
| 426 | N | A | -0.7340 | |
| 427 | V | A | 0.5546 | |
| 428 | F | A | 0.0000 | |
| 429 | S | A | -1.0450 | |
| 430 | C | A | 0.0000 | |
| 431 | S | A | 0.0000 | |
| 432 | V | A | 0.0000 | |
| 433 | M | A | 0.0000 | |
| 434 | H | A | 0.0000 | |
| 435 | E | A | -1.0767 | |
| 436 | A | A | -1.5879 | |
| 437 | L | A | -1.5301 | |
| 438 | H | A | -1.7533 | |
| 439 | N | A | -1.6860 | |
| 440 | H | A | -1.1798 | |
| 441 | Y | A | -0.5956 | |
| 442 | T | A | -0.9707 | |
| 443 | Q | A | -1.3628 | |
| 444 | K | A | -1.4129 | |
| 445 | S | A | -0.3929 | |
| 446 | L | A | 0.0000 | |
| 447 | S | A | 0.0888 | |
| 448 | L | A | -0.2753 | |
| 449 | S | A | -0.5713 | |
| 450 | P | A | -1.0407 | |
| 451 | G | A | -1.3943 | |
| 452 | K | A | -2.0213 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine