| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHDGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPAAPPPSPLYVPPPPWSPHAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEENVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9391 | |
| 2 | L | A | 1.9638 | |
| 3 | P | A | 0.6475 | |
| 4 | P | A | 0.3435 | |
| 5 | T | A | 0.1105 | |
| 6 | T | A | 0.1289 | |
| 7 | P | A | 0.1592 | |
| 8 | V | A | 1.2289 | |
| 9 | A | A | 0.0757 | |
| 10 | K | A | -1.0362 | |
| 11 | V | A | -0.1983 | |
| 12 | Q | A | -1.4290 | |
| 13 | S | A | -1.5643 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4079 | |
| 16 | E | A | -2.4342 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4616 | |
| 20 | P | A | 0.1290 | |
| 21 | T | A | 0.1594 | |
| 22 | S | A | -0.0982 | |
| 23 | L | A | 0.0877 | |
| 24 | F | A | -0.0372 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2907 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9031 | |
| 31 | R | A | -2.6875 | |
| 32 | L | A | -0.8047 | |
| 33 | L | A | 1.1533 | |
| 34 | T | A | 1.3657 | |
| 35 | V | A | 1.8218 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2600 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6458 | |
| 40 | K | A | -1.6897 | |
| 41 | D | A | -0.7412 | |
| 42 | I | A | 1.2569 | |
| 43 | V | A | 2.2190 | |
| 44 | V | A | 1.6714 | |
| 45 | N | A | -0.5313 | |
| 46 | G | A | -0.3622 | |
| 47 | K | A | -0.1353 | |
| 48 | V | A | 2.0179 | |
| 49 | L | A | 2.5260 | |
| 50 | V | A | 1.4306 | |
| 51 | P | A | 0.3153 | |
| 52 | K | A | -0.6988 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1376 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4095 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2713 | |
| 70 | K | A | -1.7903 | |
| 71 | F | A | -0.6375 | |
| 72 | A | A | -0.5750 | |
| 73 | L | A | -0.8613 | |
| 74 | P | A | -1.2025 | |
| 75 | Q | A | -2.5035 | |
| 76 | K | A | -3.1089 | |
| 77 | D | A | -2.9924 | |
| 78 | F | A | -1.6673 | |
| 79 | Y | A | -1.8927 | |
| 80 | D | A | -2.7006 | |
| 81 | P | A | -2.3093 | |
| 82 | E | A | -3.0514 | |
| 83 | K | A | -3.4034 | |
| 84 | E | A | -2.4715 | |
| 85 | R | A | -1.2976 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6596 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9635 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3620 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7017 | |
| 99 | G | A | -0.5393 | |
| 100 | P | A | -0.4174 | |
| 101 | L | A | 0.0183 | |
| 102 | G | A | -0.2800 | |
| 103 | K | A | -0.7621 | |
| 104 | G | A | -0.5211 | |
| 105 | T | A | -0.4837 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1379 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4234 | |
| 110 | L | A | 0.4014 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0173 | |
| 113 | K | A | -0.5320 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4538 | |
| 117 | T | A | -1.0565 | |
| 118 | E | A | -1.8425 | |
| 119 | N | A | -2.2314 | |
| 120 | P | A | -1.9052 | |
| 121 | T | A | -1.6098 | |
| 122 | E | A | -2.2493 | |
| 123 | P | A | -1.5777 | |
| 124 | V | A | -1.0561 | |
| 125 | H | A | -1.9693 | |
| 126 | D | A | -2.6988 | |
| 127 | G | A | -2.0316 | |
| 128 | A | A | -1.4344 | |
| 129 | D | A | -2.1429 | |
| 130 | V | A | -1.3403 | |
| 131 | R | A | -0.7508 | |
| 132 | V | A | 0.4287 | |
| 133 | A | A | 0.4505 | |
| 134 | F | A | 0.2807 | |
| 135 | S | A | -0.0746 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7311 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5746 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2134 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1119 | |
| 157 | D | A | 0.2741 | |
| 158 | I | A | 0.8305 | |
| 159 | A | A | 0.1148 | |
| 160 | E | A | -1.4763 | |
| 161 | P | A | -0.2190 | |
| 162 | C | A | 0.1883 | |
| 163 | P | A | -0.1721 | |
| 164 | G | A | -0.0807 | |
| 165 | L | A | 0.5849 | |
| 166 | P | A | -0.1174 | |
| 167 | P | A | -0.3402 | |
| 168 | G | A | -0.4202 | |
| 169 | A | A | -0.0191 | |
| 170 | C | A | 0.7437 | |
| 171 | P | A | 0.5450 | |
| 172 | P | A | 0.8067 | |
| 173 | I | A | 2.0353 | |
| 174 | Q | A | 0.8239 | |
| 175 | L | A | 1.4324 | |
| 176 | V | A | 0.8256 | |
| 177 | N | A | -0.3071 | |
| 178 | S | A | 0.0255 | |
| 179 | V | A | 0.4328 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3817 | |
| 182 | D | A | 0.0748 | |
| 183 | G | A | -0.1633 | |
| 184 | D | A | -0.5473 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1643 | |
| 190 | F | A | 0.0660 | |
| 191 | G | A | -0.0997 | |
| 192 | N | A | -0.2709 | |
| 193 | M | A | -0.1435 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3952 | |
| 197 | E | A | -2.6224 | |
| 198 | L | A | -1.2307 | |
| 199 | Q | A | -2.5505 | |
| 200 | Q | A | -3.3108 | |
| 201 | D | A | -3.5796 | |
| 202 | R | A | -3.3333 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2069 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3486 | |
| 211 | S | A | -1.8683 | |
| 212 | T | A | -1.4402 | |
| 213 | R | A | -2.1233 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1652 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3398 | |
| 220 | L | A | 0.6037 | |
| 221 | K | A | -1.1078 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8082 | |
| 224 | N | A | -1.4887 | |
| 225 | E | A | -1.2254 | |
| 226 | A | A | -0.6042 | |
| 227 | Y | A | -0.3608 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6614 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0732 | |
| 234 | F | A | 0.2566 | |
| 235 | G | A | -0.8207 | |
| 236 | R | A | -2.6065 | |
| 237 | R | A | -2.8646 | |
| 238 | E | A | -2.1252 | |
| 239 | Q | A | -0.0354 | |
| 240 | V | A | 1.6081 | |
| 241 | Y | A | 1.3446 | |
| 242 | A | A | 0.2508 | |
| 243 | R | A | -1.1025 | |
| 244 | H | A | -0.9736 | |
| 245 | F | A | 0.0132 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.2319 | |
| 248 | R | A | -0.8171 | |
| 249 | A | A | -1.3829 | |
| 250 | G | A | -1.2670 | |
| 251 | P | A | -1.2134 | |
| 252 | D | A | -1.3526 | |
| 253 | G | A | -1.2678 | |
| 254 | H | A | -1.4353 | |
| 255 | P | A | -0.7911 | |
| 256 | L | A | 0.4128 | |
| 257 | P | A | 0.0467 | |
| 258 | A | A | 0.1701 | |
| 259 | A | A | 0.3013 | |
| 260 | P | A | -0.2172 | |
| 261 | P | A | 0.0400 | |
| 262 | P | A | 0.0747 | |
| 263 | S | A | 0.5980 | |
| 264 | P | A | 0.6965 | |
| 265 | L | A | 1.8997 | |
| 266 | Y | A | 1.7508 | |
| 267 | V | A | 1.9603 | |
| 268 | P | A | 0.9090 | |
| 269 | P | A | 0.4230 | |
| 270 | P | A | 0.0766 | |
| 271 | P | A | 0.2683 | |
| 272 | W | A | 0.7766 | |
| 273 | S | A | 0.1841 | |
| 274 | P | A | -0.3255 | |
| 275 | H | A | -0.4714 | |
| 276 | A | A | 0.4001 | |
| 277 | V | A | 1.2771 | |
| 278 | P | A | 0.4366 | |
| 279 | P | A | -0.5664 | |
| 280 | S | A | -0.6534 | |
| 281 | T | A | -0.4333 | |
| 282 | D | A | -0.7840 | |
| 283 | Y | A | 0.9041 | |
| 284 | F | A | 0.6956 | |
| 285 | G | A | 0.2196 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8391 | |
| 291 | L | A | 1.6190 | |
| 292 | V | A | 0.5809 | |
| 293 | S | A | -0.1612 | |
| 294 | S | A | -0.9621 | |
| 295 | D | A | -1.8431 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1038 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6342 | |
| 301 | R | A | -1.8329 | |
| 302 | P | A | -0.9412 | |
| 303 | F | A | -0.1918 | |
| 304 | W | A | -0.5681 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0837 | |
| 307 | R | A | -2.8322 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2570 | |
| 310 | G | A | -1.2221 | |
| 311 | N | A | -1.2781 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8448 | |
| 319 | N | A | -0.8578 | |
| 320 | E | A | -1.0388 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3743 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1223 | |
| 333 | N | A | 0.5424 | |
| 334 | F | A | 1.7338 | |
| 335 | T | A | 0.8594 | |
| 336 | I | A | 0.4107 | |
| 337 | S | A | -1.0597 | |
| 338 | Q | A | -1.9128 | |
| 339 | Q | A | -1.6305 | |
| 340 | L | A | 0.2277 | |
| 341 | S | A | -0.2678 | |
| 342 | T | A | -0.8369 | |
| 343 | P | A | -1.2819 | |
| 344 | E | A | -2.4997 | |
| 345 | E | A | -2.6621 | |
| 346 | N | A | -1.5399 | |
| 347 | V | A | 0.5511 | |
| 348 | Y | A | 0.8688 | |
| 349 | D | A | -0.1984 | |
| 350 | P | A | -0.6768 | |
| 351 | S | A | -0.5523 | |
| 352 | N | A | -0.8285 | |
| 353 | F | A | -1.1418 | |
| 354 | K | A | -1.9788 | |
| 355 | N | A | -1.8230 | |
| 356 | Y | A | -0.1280 | |
| 357 | L | A | 0.6327 | |
| 358 | R | A | 0.9561 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3823 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0885 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0584 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6897 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3030 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3180 | |
| 376 | L | A | -1.7152 | |
| 377 | D | A | -1.9993 | |
| 378 | P | A | -1.0430 | |
| 379 | G | A | -1.0182 | |
| 380 | V | A | -0.9376 | |
| 381 | L | A | -0.5372 | |
| 382 | A | A | -0.6585 | |
| 383 | H | A | -0.8151 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4105 | |
| 386 | T | A | -0.5554 | |
| 387 | M | A | -0.3033 | |
| 388 | N | A | -0.8647 | |
| 389 | P | A | -1.2535 | |
| 390 | T | A | -1.4624 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4376 | |
| 393 | E | A | -2.7757 | |
| 394 | N | A | -2.3956 | |
| 395 | W | A | -1.3531 | |
| 396 | N | A | -1.0235 | |
| 397 | L | A | -0.1324 | |
| 398 | G | A | 0.5674 | |
| 399 | F | A | 2.4356 | |
| 400 | V | A | 1.8488 | |
| 401 | P | A | 0.0626 | |
| 402 | P | A | -1.8494 | |
| 403 | K | A | -3.3486 | |
| 404 | E | A | -3.8211 | |
| 405 | R | A | -4.0108 | |
| 406 | E | A | -3.8401 | |
| 407 | D | A | -2.9189 | |
| 408 | P | A | -1.7887 | |
| 409 | Y | A | -1.0011 | |
| 410 | K | A | -2.1266 | |
| 411 | G | A | -0.6459 | |
| 412 | L | A | 0.6653 | |
| 413 | I | A | 1.5821 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3998 | |
| 416 | E | A | -1.6985 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9496 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0556 | |
| 421 | E | A | -2.7893 | |
| 422 | R | A | -2.6506 | |
| 423 | F | A | -1.2880 | |
| 424 | S | A | -1.4713 | |
| 425 | Q | A | -1.8569 | |
| 426 | D | A | -2.8956 | |
| 427 | L | A | -1.9841 | |
| 428 | D | A | -2.7632 | |
| 429 | Q | A | -2.6098 | |
| 430 | F | A | -1.4155 | |
| 431 | A | A | -0.8970 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5989 | |
| 435 | K | A | -0.7183 | |
| 436 | F | A | 0.1406 | |
| 437 | L | A | 1.0227 | |
| 438 | Y | A | 0.8218 | |
| 439 | Q | A | -0.2788 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine