| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEYQHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGVPLPADPPPSPLYTKPPPDSPYAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9452 | |
| 2 | L | A | 1.9702 | |
| 3 | P | A | 0.6489 | |
| 4 | P | A | 0.3565 | |
| 5 | T | A | 0.1124 | |
| 6 | T | A | 0.1334 | |
| 7 | P | A | 0.1714 | |
| 8 | V | A | 1.2101 | |
| 9 | A | A | 0.0309 | |
| 10 | K | A | -1.1423 | |
| 11 | V | A | -0.3931 | |
| 12 | Q | A | -1.5134 | |
| 13 | S | A | -1.6106 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4535 | |
| 16 | E | A | -2.4551 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4541 | |
| 20 | P | A | 0.1029 | |
| 21 | T | A | 0.1159 | |
| 22 | S | A | -0.1699 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1062 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1766 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7535 | |
| 31 | R | A | -2.6123 | |
| 32 | L | A | -0.7520 | |
| 33 | L | A | 1.2324 | |
| 34 | T | A | 1.4716 | |
| 35 | V | A | 2.0248 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1901 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6114 | |
| 40 | K | A | -1.6124 | |
| 41 | D | A | -0.8690 | |
| 42 | I | A | 0.8293 | |
| 43 | V | A | 1.0241 | |
| 44 | K | A | -1.1884 | |
| 45 | N | A | -1.9289 | |
| 46 | G | A | -1.2390 | |
| 47 | K | A | -0.9363 | |
| 48 | V | A | 1.5009 | |
| 49 | V | A | 2.0736 | |
| 50 | V | A | 1.3310 | |
| 51 | P | A | 0.5149 | |
| 52 | K | A | -0.5928 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1594 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4557 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2974 | |
| 70 | K | A | -1.8161 | |
| 71 | F | A | -0.6731 | |
| 72 | A | A | -0.5810 | |
| 73 | L | A | -0.8640 | |
| 74 | P | A | -1.2649 | |
| 75 | Q | A | -2.4717 | |
| 76 | K | A | -3.0887 | |
| 77 | D | A | -2.9802 | |
| 78 | F | A | -1.6284 | |
| 79 | Y | A | -1.8974 | |
| 80 | D | A | -2.7265 | |
| 81 | P | A | -2.3376 | |
| 82 | E | A | -3.0576 | |
| 83 | K | A | -3.4355 | |
| 84 | E | A | -2.4893 | |
| 85 | R | A | -1.2982 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6111 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0127 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3418 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6715 | |
| 99 | G | A | -0.5289 | |
| 100 | P | A | -0.4196 | |
| 101 | L | A | -0.0019 | |
| 102 | G | A | -0.2891 | |
| 103 | K | A | -0.7904 | |
| 104 | G | A | -0.5997 | |
| 105 | S | A | -0.5689 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1156 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3968 | |
| 110 | L | A | 0.3532 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9941 | |
| 113 | K | A | -0.3706 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.7727 | |
| 117 | T | A | -1.4960 | |
| 118 | E | A | -2.6965 | |
| 119 | N | A | -2.6570 | |
| 120 | P | A | -2.1772 | |
| 121 | T | A | -1.7145 | |
| 122 | E | A | -2.2112 | |
| 123 | Y | A | -0.5063 | |
| 124 | Q | A | -1.2481 | |
| 125 | H | A | -0.9465 | |
| 126 | E | A | -1.6513 | |
| 127 | T | A | -1.2283 | |
| 128 | A | A | -1.1791 | |
| 129 | D | A | -1.9608 | |
| 130 | V | A | -1.1623 | |
| 131 | R | A | -0.7698 | |
| 132 | V | A | 0.3704 | |
| 133 | A | A | 0.4236 | |
| 134 | F | A | 0.2664 | |
| 135 | S | A | -0.1008 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7678 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5397 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2649 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0901 | |
| 157 | D | A | 0.3400 | |
| 158 | I | A | 0.8320 | |
| 159 | A | A | 0.1017 | |
| 160 | E | A | -1.4858 | |
| 161 | P | A | -0.2672 | |
| 162 | C | A | 0.1616 | |
| 163 | P | A | -0.1856 | |
| 164 | G | A | -0.0941 | |
| 165 | L | A | 0.5592 | |
| 166 | P | A | -0.1281 | |
| 167 | P | A | -0.3482 | |
| 168 | G | A | -0.4230 | |
| 169 | A | A | 0.2888 | |
| 170 | C | A | 1.0832 | |
| 171 | P | A | 0.5372 | |
| 172 | P | A | 0.6741 | |
| 173 | I | A | 2.0201 | |
| 174 | Q | A | 0.8149 | |
| 175 | L | A | 1.4060 | |
| 176 | V | A | 0.8044 | |
| 177 | N | A | -0.3448 | |
| 178 | S | A | -0.0133 | |
| 179 | V | A | 0.3732 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3618 | |
| 182 | D | A | 0.0642 | |
| 183 | G | A | -0.1606 | |
| 184 | D | A | -0.6002 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4936 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1076 | |
| 190 | F | A | 0.0118 | |
| 191 | G | A | -0.1697 | |
| 192 | N | A | -0.3633 | |
| 193 | M | A | -0.2078 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4135 | |
| 197 | E | A | -2.6054 | |
| 198 | L | A | -1.2154 | |
| 199 | Q | A | -2.5262 | |
| 200 | Q | A | -3.3550 | |
| 201 | D | A | -3.6008 | |
| 202 | R | A | -3.3482 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1794 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3971 | |
| 211 | S | A | -1.9284 | |
| 212 | T | A | -1.5124 | |
| 213 | R | A | -2.2456 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2255 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2809 | |
| 220 | L | A | 0.4831 | |
| 221 | K | A | -1.3476 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9751 | |
| 224 | N | A | -1.5889 | |
| 225 | E | A | -1.3343 | |
| 226 | A | A | -0.6805 | |
| 227 | Y | A | -0.4639 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7122 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1436 | |
| 234 | F | A | 0.0308 | |
| 235 | G | A | -0.8906 | |
| 236 | R | A | -2.6248 | |
| 237 | R | A | -2.8366 | |
| 238 | E | A | -2.1400 | |
| 239 | Q | A | -0.1005 | |
| 240 | V | A | 1.6111 | |
| 241 | Y | A | 1.2929 | |
| 242 | A | A | 0.1855 | |
| 243 | R | A | -1.3223 | |
| 244 | H | A | -1.1991 | |
| 245 | F | A | -0.2029 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5316 | |
| 249 | A | A | -1.0260 | |
| 250 | G | A | -0.9325 | |
| 251 | P | A | -0.6194 | |
| 252 | D | A | -0.2441 | |
| 253 | G | A | 0.1129 | |
| 254 | V | A | 1.4921 | |
| 255 | P | A | 0.6664 | |
| 256 | L | A | 0.8011 | |
| 257 | P | A | -0.0755 | |
| 258 | A | A | -1.1093 | |
| 259 | D | A | -1.9948 | |
| 260 | P | A | -1.5179 | |
| 261 | P | A | -1.1241 | |
| 262 | P | A | -0.8633 | |
| 263 | S | A | -0.5227 | |
| 264 | P | A | 0.2269 | |
| 265 | L | A | 1.3752 | |
| 266 | Y | A | 0.5419 | |
| 267 | T | A | -0.6362 | |
| 268 | K | A | -1.4719 | |
| 269 | P | A | -0.6612 | |
| 270 | P | A | -1.1738 | |
| 271 | P | A | -1.1166 | |
| 272 | D | A | -1.6934 | |
| 273 | S | A | -0.5188 | |
| 274 | P | A | 0.2505 | |
| 275 | Y | A | 1.1718 | |
| 276 | A | A | 0.7100 | |
| 277 | V | A | 2.0011 | |
| 278 | L | A | 1.5511 | |
| 279 | P | A | 0.4050 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.5338 | |
| 282 | D | A | -0.2267 | |
| 283 | Y | A | 1.1319 | |
| 284 | F | A | 0.8392 | |
| 285 | G | A | 0.1399 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9411 | |
| 291 | L | A | 1.6229 | |
| 292 | V | A | 0.5924 | |
| 293 | S | A | -0.1789 | |
| 294 | S | A | -0.9974 | |
| 295 | D | A | -1.8778 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0499 | |
| 298 | L | A | -1.1845 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7190 | |
| 301 | R | A | -2.0311 | |
| 302 | P | A | -1.0317 | |
| 303 | F | A | -0.2098 | |
| 304 | W | A | -0.5229 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0723 | |
| 307 | R | A | -2.9242 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6605 | |
| 310 | G | A | -1.4267 | |
| 311 | N | A | -1.3966 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8475 | |
| 319 | N | A | -0.9714 | |
| 320 | E | A | -1.0421 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3676 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1937 | |
| 333 | N | A | 0.4154 | |
| 334 | F | A | 1.4934 | |
| 335 | T | A | 0.7498 | |
| 336 | I | A | 0.3846 | |
| 337 | S | A | -0.9025 | |
| 338 | Q | A | -1.5062 | |
| 339 | Q | A | -0.8849 | |
| 340 | L | A | 0.7819 | |
| 341 | C | A | 0.4223 | |
| 342 | T | A | 0.1510 | |
| 343 | P | A | -0.2797 | |
| 344 | A | A | 0.1102 | |
| 345 | P | A | 0.1394 | |
| 346 | N | A | -0.2754 | |
| 347 | V | A | 1.5508 | |
| 348 | Y | A | 1.4566 | |
| 349 | D | A | 0.0667 | |
| 350 | P | A | -0.3656 | |
| 351 | S | A | -0.2846 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5901 | |
| 354 | K | A | -1.7427 | |
| 355 | N | A | -1.7256 | |
| 356 | Y | A | -0.0972 | |
| 357 | L | A | 0.5918 | |
| 358 | R | A | 0.9543 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4937 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0102 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9231 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6741 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3011 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3305 | |
| 376 | L | A | -1.7673 | |
| 377 | D | A | -2.0673 | |
| 378 | P | A | -1.0803 | |
| 379 | G | A | -1.0292 | |
| 380 | V | A | -0.9360 | |
| 381 | L | A | -0.5494 | |
| 382 | A | A | -0.6641 | |
| 383 | H | A | -0.8460 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3945 | |
| 386 | T | A | -0.5705 | |
| 387 | M | A | -0.3265 | |
| 388 | N | A | -0.8602 | |
| 389 | P | A | -1.2496 | |
| 390 | T | A | -1.4558 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4466 | |
| 393 | E | A | -2.9733 | |
| 394 | N | A | -2.6035 | |
| 395 | W | A | -1.3887 | |
| 396 | N | A | -1.2314 | |
| 397 | L | A | -0.1680 | |
| 398 | G | A | 0.6801 | |
| 399 | F | A | 2.4402 | |
| 400 | V | A | 2.0582 | |
| 401 | P | A | 0.0842 | |
| 402 | P | A | -1.7719 | |
| 403 | K | A | -3.4233 | |
| 404 | E | A | -3.8442 | |
| 405 | R | A | -3.9018 | |
| 406 | E | A | -3.7494 | |
| 407 | D | A | -2.8459 | |
| 408 | P | A | -1.7476 | |
| 409 | Y | A | -0.9961 | |
| 410 | K | A | -2.0963 | |
| 411 | G | A | -0.6403 | |
| 412 | L | A | 0.6534 | |
| 413 | I | A | 1.5708 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4053 | |
| 416 | E | A | -1.6880 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8624 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9054 | |
| 421 | E | A | -2.5064 | |
| 422 | R | A | -2.0057 | |
| 423 | F | A | -1.0288 | |
| 424 | S | A | -1.3404 | |
| 425 | Q | A | -1.8239 | |
| 426 | D | A | -2.9216 | |
| 427 | L | A | -2.0162 | |
| 428 | D | A | -2.8074 | |
| 429 | Q | A | -2.6284 | |
| 430 | F | A | -1.4421 | |
| 431 | A | A | -0.9032 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6083 | |
| 435 | K | A | -0.7383 | |
| 436 | F | A | 0.1560 | |
| 437 | L | A | 1.0273 | |
| 438 | Y | A | 0.8218 | |
| 439 | Q | A | -0.2689 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine