| Chain sequence(s) |
A: MDKDCEMKRTTLDSPLGKLELSGCEQGLHRIIFLGKGTSAADAVEVPAPAAVLGGPEPLIQATAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISESHLAALVGNPAATAAVNTALDGNPVPILIPCHRVVQGDSDVGPYLGGLAVKEWLLAHEGHRLGKPGLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.6776 | |
| 2 | D | A | -2.5285 | |
| 3 | K | A | -3.3085 | |
| 4 | D | A | -3.1673 | |
| 5 | C | A | -2.7084 | |
| 6 | E | A | -2.8707 | |
| 7 | M | A | -1.9561 | |
| 8 | K | A | -2.3832 | |
| 9 | R | A | -2.4697 | |
| 10 | T | A | -1.0363 | |
| 11 | T | A | -1.0681 | |
| 12 | L | A | 0.0000 | |
| 13 | D | A | -2.4210 | |
| 14 | S | A | 0.0000 | |
| 15 | P | A | -0.8384 | |
| 16 | L | A | 0.0000 | |
| 17 | G | A | -1.3955 | |
| 18 | K | A | -1.7593 | |
| 19 | L | A | 0.0000 | |
| 20 | E | A | -0.9998 | |
| 21 | L | A | 0.0000 | |
| 22 | S | A | -1.2906 | |
| 23 | G | A | 0.0000 | |
| 24 | C | A | 0.0000 | |
| 25 | E | A | -3.1976 | |
| 26 | Q | A | -2.6510 | |
| 27 | G | A | 0.0000 | |
| 28 | L | A | 0.0000 | |
| 29 | H | A | -0.8775 | |
| 30 | R | A | -0.8517 | |
| 31 | I | A | 0.0000 | |
| 32 | I | A | 0.5808 | |
| 33 | F | A | 0.1156 | |
| 34 | L | A | -0.4416 | |
| 35 | G | A | -1.1626 | |
| 36 | K | A | -1.9312 | |
| 37 | G | A | -1.0540 | |
| 38 | T | A | -1.2265 | |
| 39 | S | A | -0.9033 | |
| 40 | A | A | -0.4376 | |
| 41 | A | A | -0.6159 | |
| 42 | D | A | -1.4758 | |
| 43 | A | A | -0.3723 | |
| 44 | V | A | 0.4905 | |
| 45 | E | A | -1.1939 | |
| 46 | V | A | -0.4442 | |
| 47 | P | A | -0.5706 | |
| 48 | A | A | -0.6132 | |
| 49 | P | A | -0.4680 | |
| 50 | A | A | 0.0660 | |
| 51 | A | A | 0.7177 | |
| 52 | V | A | 0.7073 | |
| 53 | L | A | 1.5192 | |
| 54 | G | A | -0.1581 | |
| 55 | G | A | -1.1540 | |
| 56 | P | A | 0.0000 | |
| 57 | E | A | -2.3743 | |
| 58 | P | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | I | A | 0.0578 | |
| 61 | Q | A | -0.1621 | |
| 62 | A | A | 0.0000 | |
| 63 | T | A | 0.0000 | |
| 64 | A | A | 0.2650 | |
| 65 | W | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | N | A | -0.7996 | |
| 68 | A | A | 0.0000 | |
| 69 | Y | A | 0.0000 | |
| 70 | F | A | 0.0000 | |
| 71 | H | A | -1.4211 | |
| 72 | Q | A | -1.8918 | |
| 73 | P | A | -2.0241 | |
| 74 | E | A | -2.7310 | |
| 75 | A | A | -2.2652 | |
| 76 | I | A | 0.0000 | |
| 77 | E | A | -2.7895 | |
| 78 | E | A | -2.5280 | |
| 79 | F | A | -0.6176 | |
| 80 | P | A | -0.1394 | |
| 81 | V | A | 0.8289 | |
| 82 | P | A | 0.0000 | |
| 83 | A | A | -0.4576 | |
| 84 | L | A | -0.2452 | |
| 85 | H | A | -1.0449 | |
| 86 | H | A | -0.8694 | |
| 87 | P | A | -0.8295 | |
| 88 | V | A | -0.9492 | |
| 89 | F | A | 0.0000 | |
| 90 | Q | A | -2.0321 | |
| 91 | Q | A | -2.5601 | |
| 92 | E | A | -2.6573 | |
| 93 | S | A | -1.2755 | |
| 94 | F | A | -0.1755 | |
| 95 | T | A | -0.7338 | |
| 96 | R | A | -1.1882 | |
| 97 | Q | A | -0.7272 | |
| 98 | V | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | W | A | -0.2453 | |
| 101 | K | A | -0.4220 | |
| 102 | L | A | 0.0000 | |
| 103 | L | A | -0.4235 | |
| 104 | K | A | -1.3052 | |
| 105 | V | A | -0.0946 | |
| 106 | V | A | 0.0000 | |
| 107 | K | A | -1.4918 | |
| 108 | F | A | -0.9257 | |
| 109 | G | A | -0.8798 | |
| 110 | E | A | -1.1682 | |
| 111 | V | A | 0.1037 | |
| 112 | I | A | 0.0000 | |
| 113 | S | A | -1.0302 | |
| 114 | E | A | -0.8855 | |
| 115 | S | A | -1.0563 | |
| 116 | H | A | -1.0359 | |
| 117 | L | A | 0.0000 | |
| 118 | A | A | 0.0000 | |
| 119 | A | A | -0.6128 | |
| 120 | L | A | -0.0066 | |
| 121 | V | A | -0.2208 | |
| 122 | G | A | -0.7544 | |
| 123 | N | A | -1.0887 | |
| 124 | P | A | -0.8739 | |
| 125 | A | A | -0.5045 | |
| 126 | A | A | -0.4448 | |
| 127 | T | A | -0.7165 | |
| 128 | A | A | -0.2822 | |
| 129 | A | A | -0.4317 | |
| 130 | V | A | 0.0000 | |
| 131 | N | A | -1.5796 | |
| 132 | T | A | -1.1920 | |
| 133 | A | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | D | A | -2.0678 | |
| 136 | G | A | -1.3297 | |
| 137 | N | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | P | A | 0.0000 | |
| 141 | I | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | I | A | 0.0000 | |
| 144 | P | A | 0.0000 | |
| 145 | C | A | 0.0000 | |
| 146 | H | A | 0.0000 | |
| 147 | R | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | V | A | -0.9849 | |
| 150 | Q | A | -2.1167 | |
| 151 | G | A | -2.1771 | |
| 152 | D | A | -2.5287 | |
| 153 | S | A | -1.9314 | |
| 154 | D | A | -2.0503 | |
| 155 | V | A | -0.9511 | |
| 156 | G | A | -0.8358 | |
| 157 | P | A | -0.4296 | |
| 158 | Y | A | 0.0000 | |
| 159 | L | A | 0.4952 | |
| 160 | G | A | 0.2860 | |
| 161 | G | A | 0.0227 | |
| 162 | L | A | 0.6543 | |
| 163 | A | A | -0.1534 | |
| 164 | V | A | 0.0000 | |
| 165 | K | A | 0.0000 | |
| 166 | E | A | -0.6686 | |
| 167 | W | A | -0.3781 | |
| 168 | L | A | 0.0000 | |
| 169 | L | A | 0.0000 | |
| 170 | A | A | -0.9190 | |
| 171 | H | A | -0.6480 | |
| 172 | E | A | 0.0000 | |
| 173 | G | A | -1.1674 | |
| 174 | H | A | -1.5029 | |
| 175 | R | A | -2.3231 | |
| 176 | L | A | -1.5843 | |
| 177 | G | A | -1.8517 | |
| 178 | K | A | -2.0322 | |
| 179 | P | A | -1.0982 | |
| 180 | G | A | -0.6086 | |
| 181 | L | A | 0.7097 | |
| 182 | G | A | 0.1113 |