| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAYVSYWKVRYYRITYGETGGNSPVQEFTVPSSSSTATISGLKPGVDYTITVYAKMYSYPYWYYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7042 | |
| 2 | S | A | 0.7940 | |
| 3 | S | A | 1.4341 | |
| 4 | V | A | 0.9187 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.2262 | |
| 7 | K | A | -2.4697 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.8605 | |
| 10 | V | A | 0.1042 | |
| 11 | V | A | 1.5400 | |
| 12 | A | A | 0.9011 | |
| 13 | A | A | 0.2958 | |
| 14 | T | A | -0.3427 | |
| 15 | P | A | -1.1327 | |
| 16 | T | A | -1.0014 | |
| 17 | S | A | -0.5339 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7562 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7008 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.5947 | |
| 24 | A | A | -0.0322 | |
| 25 | Y | A | 1.4487 | |
| 26 | V | A | 1.9821 | |
| 27 | S | A | 1.6533 | |
| 28 | Y | A | 1.5952 | |
| 29 | W | A | 0.9321 | |
| 30 | K | A | -1.1378 | |
| 31 | V | A | 0.0000 | |
| 32 | R | A | -2.1600 | |
| 33 | Y | A | -1.0173 | |
| 34 | Y | A | 0.0000 | |
| 35 | R | A | -0.6605 | |
| 36 | I | A | 0.0000 | |
| 37 | T | A | -0.6721 | |
| 38 | Y | A | -0.4267 | |
| 39 | G | A | 0.0000 | |
| 40 | E | A | -1.6490 | |
| 41 | T | A | -1.2839 | |
| 42 | G | A | -1.2581 | |
| 43 | G | A | -1.4299 | |
| 44 | N | A | -1.5628 | |
| 45 | S | A | -0.9359 | |
| 46 | P | A | -0.4342 | |
| 47 | V | A | 0.2425 | |
| 48 | Q | A | -1.2168 | |
| 49 | E | A | -1.8128 | |
| 50 | F | A | -0.7042 | |
| 51 | T | A | -0.2800 | |
| 52 | V | A | -0.1883 | |
| 53 | P | A | -0.6472 | |
| 54 | S | A | -0.8706 | |
| 55 | S | A | -0.3413 | |
| 56 | S | A | -0.3496 | |
| 57 | S | A | -0.4419 | |
| 58 | T | A | -0.1914 | |
| 59 | A | A | 0.0000 | |
| 60 | T | A | 0.2582 | |
| 61 | I | A | 0.0000 | |
| 62 | S | A | -0.6600 | |
| 63 | G | A | -1.0349 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.3798 | |
| 66 | P | A | -1.6694 | |
| 67 | G | A | -1.4601 | |
| 68 | V | A | -1.4326 | |
| 69 | D | A | -2.1092 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.7998 | |
| 72 | I | A | 0.0000 | |
| 73 | T | A | -0.1855 | |
| 74 | V | A | 0.0000 | |
| 75 | Y | A | 0.5487 | |
| 76 | A | A | 0.0000 | |
| 77 | K | A | 0.1186 | |
| 78 | M | A | 0.0000 | |
| 79 | Y | A | 1.2578 | |
| 80 | S | A | 0.0000 | |
| 81 | Y | A | 2.1294 | |
| 82 | P | A | 1.5226 | |
| 83 | Y | A | 2.5871 | |
| 84 | W | A | 2.5981 | |
| 85 | Y | A | 2.7356 | |
| 86 | Y | A | 2.2099 | |
| 87 | S | A | 0.0000 | |
| 88 | P | A | 0.4818 | |
| 89 | I | A | 0.2163 | |
| 90 | S | A | -0.5443 | |
| 91 | I | A | -0.7148 | |
| 92 | N | A | -1.7406 | |
| 93 | Y | A | -1.5131 | |
| 94 | R | A | -2.5554 | |
| 95 | T | A | -1.5252 |