Project name: query_structure

Status: done

Started: 2026-03-16 22:48:45
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAYVSYWKVRYYRITYGETGGNSPVQEFTVPSSSSTATISGLKPGVDYTITVYAKMYSYPYWYYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:47)
Show buried residues

Minimal score value
-2.5554
Maximal score value
2.7356
Average score
-0.2097
Total score value
-19.9255

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7042
2 S A 0.7940
3 S A 1.4341
4 V A 0.9187
5 P A 0.0000
6 T A -1.2262
7 K A -2.4697
8 L A 0.0000
9 E A -1.8605
10 V A 0.1042
11 V A 1.5400
12 A A 0.9011
13 A A 0.2958
14 T A -0.3427
15 P A -1.1327
16 T A -1.0014
17 S A -0.5339
18 L A 0.0000
19 L A 0.7562
20 I A 0.0000
21 S A -0.7008
22 W A 0.0000
23 D A -1.5947
24 A A -0.0322
25 Y A 1.4487
26 V A 1.9821
27 S A 1.6533
28 Y A 1.5952
29 W A 0.9321
30 K A -1.1378
31 V A 0.0000
32 R A -2.1600
33 Y A -1.0173
34 Y A 0.0000
35 R A -0.6605
36 I A 0.0000
37 T A -0.6721
38 Y A -0.4267
39 G A 0.0000
40 E A -1.6490
41 T A -1.2839
42 G A -1.2581
43 G A -1.4299
44 N A -1.5628
45 S A -0.9359
46 P A -0.4342
47 V A 0.2425
48 Q A -1.2168
49 E A -1.8128
50 F A -0.7042
51 T A -0.2800
52 V A -0.1883
53 P A -0.6472
54 S A -0.8706
55 S A -0.3413
56 S A -0.3496
57 S A -0.4419
58 T A -0.1914
59 A A 0.0000
60 T A 0.2582
61 I A 0.0000
62 S A -0.6600
63 G A -1.0349
64 L A 0.0000
65 K A -2.3798
66 P A -1.6694
67 G A -1.4601
68 V A -1.4326
69 D A -2.1092
70 Y A 0.0000
71 T A -0.7998
72 I A 0.0000
73 T A -0.1855
74 V A 0.0000
75 Y A 0.5487
76 A A 0.0000
77 K A 0.1186
78 M A 0.0000
79 Y A 1.2578
80 S A 0.0000
81 Y A 2.1294
82 P A 1.5226
83 Y A 2.5871
84 W A 2.5981
85 Y A 2.7356
86 Y A 2.2099
87 S A 0.0000
88 P A 0.4818
89 I A 0.2163
90 S A -0.5443
91 I A -0.7148
92 N A -1.7406
93 Y A -1.5131
94 R A -2.5554
95 T A -1.5252
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Laboratory of Theory of Biopolymers 2018