Project name: 6XY2

Status: done

Started: 2026-03-30 05:50:06
Settings
Chain sequence(s) H: QVQLQESGPGLVKPSETLSLTCTVSGFSLTSYGLSWIRQPPGKGLEWIGYIWYDGNTNFHSPLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAKTEGHYYGSNYGYYALDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASENIYSNLAWYQQKQGKAPKLLLYAATNLQDGVPSRFSGSGSGTDYTLTISSLQPEDFATYFCQHLWGTPYTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:04)
Show buried residues

Minimal score value
-2.921
Maximal score value
1.1459
Average score
-0.5475
Total score value
-127.0152

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5456
2 V H -1.0219
3 Q H -1.7647
4 L H 0.0000
5 Q H -1.6865
6 E H 0.0000
7 S H -0.6523
8 G H -0.5041
9 P H -0.2119
11 G H 0.0649
12 L H 0.3395
13 V H 0.0000
14 K H -1.7143
15 P H -1.3156
16 S H -1.3960
17 E H -2.0165
18 T H -1.4677
19 L H 0.0000
20 S H -0.9509
21 L H 0.0000
22 T H -0.6088
23 C H 0.0000
24 T H -1.2067
25 V H 0.0000
26 S H -1.3724
27 G H -1.1306
28 F H -0.4922
29 S H -0.0684
30 L H 0.0000
35 T H -0.0610
36 S H 0.0017
37 Y H 0.2700
38 G H 0.0000
39 L H 0.0000
40 S H 0.0000
41 W H 0.0000
42 I H 0.0000
43 R H 0.0000
44 Q H -0.7110
45 P H -0.7878
46 P H -0.8913
47 G H -1.4549
48 K H -2.3346
49 G H -1.5619
50 L H 0.0000
51 E H -0.9736
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H -0.1043
56 I H 0.0000
57 W H -0.2611
58 Y H 0.0152
59 D H -1.5087
63 G H -1.2890
64 N H -1.6109
65 T H -0.7741
66 N H -0.7147
67 F H -0.6557
68 H H -1.0223
69 S H -1.2339
70 P H -0.9435
71 L H 0.0000
72 K H -2.0715
74 S H -1.3011
75 R H -1.3337
76 V H 0.0000
77 T H -0.9893
78 I H 0.0000
79 S H -0.5739
80 V H -0.6749
81 D H -1.2374
82 T H -1.2435
83 S H -1.3686
84 K H -2.2733
85 N H -1.6360
86 Q H -1.4063
87 F H 0.0000
88 S H -0.5874
89 L H 0.0000
90 K H -1.5209
91 L H 0.0000
92 S H -1.1278
93 S H -1.0794
94 V H 0.0000
95 T H -0.5630
96 A H -0.1931
97 A H 0.0607
98 D H 0.0000
99 T H 0.2036
100 A H 0.0000
101 V H 0.4121
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 T H 0.0000
108 E H -0.0702
109 G H 0.1610
110 H H 0.4585
111 Y H 1.1459
111A Y H 0.5782
111B G H -0.1820
111C S H -0.4219
112C N H -0.4910
112B Y H 0.1941
112A G H 0.3077
112 Y H 0.6929
113 Y H 0.5048
114 A H 0.0000
115 L H 0.0000
116 D H -0.3457
117 Y H -0.0509
118 W H -0.4824
119 G H 0.0000
120 Q H -1.8340
121 G H -0.8779
122 T H -0.1506
123 L H 0.6781
124 V H 0.0000
125 T H 0.1740
126 V H 0.0000
127 S H -0.5100
128 S H -0.6428
1 D L -2.3500
2 I L 0.0000
3 Q L -2.3188
4 M L 0.0000
5 T L -1.4209
6 Q L 0.0000
7 S L -0.7047
8 P L -0.5739
9 S L -0.8140
10 S L -0.8503
11 L L -0.6218
12 S L -0.8736
13 A L -0.8952
14 S L -0.7401
15 V L 0.1898
16 G L -0.6935
17 D L -1.7430
18 R L -2.3025
19 V L 0.0000
20 T L -0.6032
21 I L 0.0000
22 T L -0.7863
23 C L 0.0000
24 R L -2.8054
25 A L 0.0000
26 S L -2.1468
27 E L -2.3532
28 N L -1.3037
29 I L 0.0000
36 Y L 0.8459
37 S L 0.2881
38 N L 0.0000
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.7152
44 Q L -1.3820
45 K L -1.9886
46 Q L -2.0347
47 G L -2.1713
48 K L -2.9210
49 A L -1.7253
50 P L 0.0000
51 K L -1.2051
52 L L 0.0000
53 L L 0.0000
54 L L 0.0000
55 Y L 0.3513
56 A L 0.0000
57 A L 0.0000
65 T L -0.1385
66 N L -0.0690
67 L L -0.0438
68 Q L -0.9901
69 D L -1.9688
70 G L -1.2572
71 V L -0.7547
72 P L -0.5184
74 S L -0.3470
75 R L -0.7416
76 F L 0.0000
77 S L -0.2589
78 G L -0.1991
79 S L -0.5906
80 G L -0.7970
83 S L -0.6668
84 G L -0.7966
85 T L -1.6059
86 D L -1.9472
87 Y L 0.0000
88 T L -0.6955
89 L L 0.0000
90 T L -0.5857
91 I L 0.0000
92 S L -1.2989
93 S L -1.2102
94 L L 0.0000
95 Q L -1.0557
96 P L -0.8983
97 E L -1.4885
98 D L 0.0000
99 F L 0.2178
100 A L 0.0000
101 T L -0.8830
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 H L 0.0000
107 L L 0.0000
108 W L 1.0687
109 G L -0.0061
114 T L -0.3066
115 P L 0.0000
116 Y L 0.0000
117 T L 0.0000
118 F L 0.0000
119 G L 0.0000
120 Q L -1.6843
121 G L 0.0000
122 T L 0.0000
123 K L -1.3571
124 L L 0.0000
125 E L -0.9493
126 I L -0.3928
127 K L -1.4305
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Laboratory of Theory of Biopolymers 2018