| Chain sequence(s) |
H: QVQLQESGPGLVKPSETLSLTCTVSGFSLTSYGLSWIRQPPGKGLEWIGYIWYDGNTNFHSPLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAKTEGHYYGSNYGYYALDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASENIYSNLAWYQQKQGKAPKLLLYAATNLQDGVPSRFSGSGSGTDYTLTISSLQPEDFATYFCQHLWGTPYTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5456 | |
| 2 | V | H | -1.0219 | |
| 3 | Q | H | -1.7647 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.6865 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6523 | |
| 8 | G | H | -0.5041 | |
| 9 | P | H | -0.2119 | |
| 11 | G | H | 0.0649 | |
| 12 | L | H | 0.3395 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.7143 | |
| 15 | P | H | -1.3156 | |
| 16 | S | H | -1.3960 | |
| 17 | E | H | -2.0165 | |
| 18 | T | H | -1.4677 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.9509 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.6088 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.2067 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.3724 | |
| 27 | G | H | -1.1306 | |
| 28 | F | H | -0.4922 | |
| 29 | S | H | -0.0684 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -0.0610 | |
| 36 | S | H | 0.0017 | |
| 37 | Y | H | 0.2700 | |
| 38 | G | H | 0.0000 | |
| 39 | L | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7110 | |
| 45 | P | H | -0.7878 | |
| 46 | P | H | -0.8913 | |
| 47 | G | H | -1.4549 | |
| 48 | K | H | -2.3346 | |
| 49 | G | H | -1.5619 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9736 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | -0.1043 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.2611 | |
| 58 | Y | H | 0.0152 | |
| 59 | D | H | -1.5087 | |
| 63 | G | H | -1.2890 | |
| 64 | N | H | -1.6109 | |
| 65 | T | H | -0.7741 | |
| 66 | N | H | -0.7147 | |
| 67 | F | H | -0.6557 | |
| 68 | H | H | -1.0223 | |
| 69 | S | H | -1.2339 | |
| 70 | P | H | -0.9435 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -2.0715 | |
| 74 | S | H | -1.3011 | |
| 75 | R | H | -1.3337 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9893 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5739 | |
| 80 | V | H | -0.6749 | |
| 81 | D | H | -1.2374 | |
| 82 | T | H | -1.2435 | |
| 83 | S | H | -1.3686 | |
| 84 | K | H | -2.2733 | |
| 85 | N | H | -1.6360 | |
| 86 | Q | H | -1.4063 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.5874 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.5209 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.1278 | |
| 93 | S | H | -1.0794 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5630 | |
| 96 | A | H | -0.1931 | |
| 97 | A | H | 0.0607 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2036 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4121 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | T | H | 0.0000 | |
| 108 | E | H | -0.0702 | |
| 109 | G | H | 0.1610 | |
| 110 | H | H | 0.4585 | |
| 111 | Y | H | 1.1459 | |
| 111A | Y | H | 0.5782 | |
| 111B | G | H | -0.1820 | |
| 111C | S | H | -0.4219 | |
| 112C | N | H | -0.4910 | |
| 112B | Y | H | 0.1941 | |
| 112A | G | H | 0.3077 | |
| 112 | Y | H | 0.6929 | |
| 113 | Y | H | 0.5048 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.3457 | |
| 117 | Y | H | -0.0509 | |
| 118 | W | H | -0.4824 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8340 | |
| 121 | G | H | -0.8779 | |
| 122 | T | H | -0.1506 | |
| 123 | L | H | 0.6781 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1740 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5100 | |
| 128 | S | H | -0.6428 | |
| 1 | D | L | -2.3500 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3188 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4209 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7047 | |
| 8 | P | L | -0.5739 | |
| 9 | S | L | -0.8140 | |
| 10 | S | L | -0.8503 | |
| 11 | L | L | -0.6218 | |
| 12 | S | L | -0.8736 | |
| 13 | A | L | -0.8952 | |
| 14 | S | L | -0.7401 | |
| 15 | V | L | 0.1898 | |
| 16 | G | L | -0.6935 | |
| 17 | D | L | -1.7430 | |
| 18 | R | L | -2.3025 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6032 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7863 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8054 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1468 | |
| 27 | E | L | -2.3532 | |
| 28 | N | L | -1.3037 | |
| 29 | I | L | 0.0000 | |
| 36 | Y | L | 0.8459 | |
| 37 | S | L | 0.2881 | |
| 38 | N | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7152 | |
| 44 | Q | L | -1.3820 | |
| 45 | K | L | -1.9886 | |
| 46 | Q | L | -2.0347 | |
| 47 | G | L | -2.1713 | |
| 48 | K | L | -2.9210 | |
| 49 | A | L | -1.7253 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2051 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | L | L | 0.0000 | |
| 55 | Y | L | 0.3513 | |
| 56 | A | L | 0.0000 | |
| 57 | A | L | 0.0000 | |
| 65 | T | L | -0.1385 | |
| 66 | N | L | -0.0690 | |
| 67 | L | L | -0.0438 | |
| 68 | Q | L | -0.9901 | |
| 69 | D | L | -1.9688 | |
| 70 | G | L | -1.2572 | |
| 71 | V | L | -0.7547 | |
| 72 | P | L | -0.5184 | |
| 74 | S | L | -0.3470 | |
| 75 | R | L | -0.7416 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.2589 | |
| 78 | G | L | -0.1991 | |
| 79 | S | L | -0.5906 | |
| 80 | G | L | -0.7970 | |
| 83 | S | L | -0.6668 | |
| 84 | G | L | -0.7966 | |
| 85 | T | L | -1.6059 | |
| 86 | D | L | -1.9472 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.6955 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5857 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2989 | |
| 93 | S | L | -1.2102 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.0557 | |
| 96 | P | L | -0.8983 | |
| 97 | E | L | -1.4885 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 0.2178 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8830 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | H | L | 0.0000 | |
| 107 | L | L | 0.0000 | |
| 108 | W | L | 1.0687 | |
| 109 | G | L | -0.0061 | |
| 114 | T | L | -0.3066 | |
| 115 | P | L | 0.0000 | |
| 116 | Y | L | 0.0000 | |
| 117 | T | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6843 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3571 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.9493 | |
| 126 | I | L | -0.3928 | |
| 127 | K | L | -1.4305 |