| Chain sequence(s) |
A: SLKELEEKKQELVEKINSQIDKVFELDSKFEKLKKEDKEEAKKAQKELEKALEELKKLCAELAKVARA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:54)
[INFO] Main: Simulation completed successfully. (00:02:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.8826 | |
| 2 | L | A | -0.5703 | |
| 3 | K | A | -2.9914 | |
| 4 | E | A | -3.6131 | |
| 5 | L | A | -2.3762 | |
| 6 | E | A | -4.1728 | |
| 7 | E | A | -4.8440 | |
| 8 | K | A | -3.9787 | |
| 9 | K | A | -3.8291 | |
| 10 | Q | A | -4.0742 | |
| 11 | E | A | -4.1092 | |
| 12 | L | A | 0.0000 | |
| 13 | V | A | -2.1745 | |
| 14 | E | A | -3.3586 | |
| 15 | K | A | -2.6052 | |
| 16 | I | A | 0.0000 | |
| 17 | N | A | -2.5145 | |
| 18 | S | A | -2.2070 | |
| 19 | Q | A | 0.0000 | |
| 20 | I | A | -1.2306 | |
| 21 | D | A | -2.2561 | |
| 22 | K | A | -1.9412 | |
| 23 | V | A | 0.0000 | |
| 24 | F | A | -0.0719 | |
| 25 | E | A | -2.0458 | |
| 26 | L | A | -2.4038 | |
| 27 | D | A | -2.2682 | |
| 28 | S | A | -1.9653 | |
| 29 | K | A | -2.7196 | |
| 30 | F | A | -3.6562 | |
| 31 | E | A | -3.5753 | |
| 32 | K | A | -3.9943 | |
| 33 | L | A | -4.6575 | |
| 34 | K | A | -4.7875 | |
| 35 | K | A | -4.2816 | |
| 36 | E | A | -4.6327 | |
| 37 | D | A | -4.6563 | |
| 38 | K | A | -4.9816 | |
| 39 | E | A | -4.7972 | |
| 40 | E | A | -4.4075 | |
| 41 | A | A | 0.0000 | |
| 42 | K | A | -4.8913 | |
| 43 | K | A | -4.6903 | |
| 44 | A | A | 0.0000 | |
| 45 | Q | A | -4.3043 | |
| 46 | K | A | -4.5468 | |
| 47 | E | A | -4.3438 | |
| 48 | L | A | 0.0000 | |
| 49 | E | A | -4.4269 | |
| 50 | K | A | -4.3721 | |
| 51 | A | A | 0.0000 | |
| 52 | L | A | -2.7645 | |
| 53 | E | A | -4.0016 | |
| 54 | E | A | -3.3320 | |
| 55 | L | A | -2.7630 | |
| 56 | K | A | -3.3138 | |
| 57 | K | A | -3.2030 | |
| 58 | L | A | -1.9280 | |
| 59 | C | A | -1.3781 | |
| 60 | A | A | -1.6599 | |
| 61 | E | A | -1.9001 | |
| 62 | L | A | -1.6481 | |
| 63 | A | A | -1.5326 | |
| 64 | K | A | -2.3575 | |
| 65 | V | A | -1.6400 | |
| 66 | A | A | -1.6977 | |
| 67 | R | A | -2.2157 | |
| 68 | A | A | -1.2321 |