Project name: P.sativum333 [mutate: YT24A]

Status: done

Started: 2026-02-26 19:40:01
Settings
Chain sequence(s) A: MGFTEKQEALVNSSWELFKQNPSYSVLFYTIILKKAPAAKGMFSFLKDSAEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVLGDATLGAIHIQKGVVDPHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAMN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues YT24A
Energy difference between WT (input) and mutated protein (by FoldX) 1.29879 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       FoldX:    Building mutant model                                                       (00:02:54)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:03:05)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:53)
Show buried residues

Minimal score value
-3.0979
Maximal score value
1.1013
Average score
-0.9437
Total score value
-137.7743

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8143
2 G A -0.6071
3 F A -1.0996
4 T A -1.7210
5 E A -2.9586
6 K A -2.9742
7 Q A 0.0000
8 E A -1.7854
9 A A -1.1608
10 L A -1.1656
11 V A 0.0000
12 N A -1.1382
13 S A -1.0225
14 S A 0.0000
15 W A 0.0000
16 E A -2.6878
17 L A -1.9162
18 F A 0.0000
19 K A -3.0979
20 Q A -2.7691
21 N A -2.3711
22 P A -1.8328
23 S A -1.0452
24 T A 0.0000 mutated: YT24A
25 S A 0.0000
26 V A -0.1234
27 L A -0.0506
28 F A 0.0000
29 Y A 0.0000
30 T A -0.4585
31 I A -0.8335
32 I A 0.0000
33 L A -1.3320
34 K A -2.2755
35 K A -2.1625
36 A A -1.2006
37 P A -1.1108
38 A A -0.5877
39 A A 0.0000
40 K A -1.5020
41 G A -1.4732
42 M A -0.9903
43 F A 0.0000
44 S A -1.3597
45 F A -1.3345
46 L A 0.0000
47 K A -2.9298
48 D A -2.8966
49 S A -1.6999
50 A A -1.3739
51 E A -2.0675
52 V A -0.8806
53 V A -0.4089
54 D A -1.8422
55 S A -1.3782
56 P A -1.5915
57 K A -2.3209
58 L A 0.0000
59 Q A -2.1158
60 A A -1.6679
61 H A -1.6198
62 A A 0.0000
63 E A -2.3049
64 K A -1.9700
65 V A -0.8036
66 F A 0.0000
67 G A -1.3852
68 M A -0.8910
69 V A 0.0000
70 H A -0.9562
71 D A -1.2888
72 S A 0.0000
73 A A 0.0000
74 I A -1.1034
75 Q A -1.0614
76 L A -1.3177
77 R A -2.5505
78 A A -1.2949
79 S A -1.1748
80 G A -1.7205
81 E A -1.8222
82 V A -0.5199
83 V A 1.1013
84 L A 0.5460
85 G A -0.2096
86 D A -0.6008
87 A A 0.0308
88 T A 0.0865
89 L A 0.3315
90 G A 0.0000
91 A A 0.5662
92 I A 0.9781
93 H A 0.5731
94 I A 0.9658
95 Q A -0.5747
96 K A -0.8855
97 G A -0.2708
98 V A 0.0521
99 V A 0.2781
100 D A -1.1703
101 P A -0.2028
102 H A -0.0521
103 F A 0.0000
104 V A 1.0366
105 V A 0.0446
106 V A 0.2821
107 K A -0.4262
108 E A -0.8580
109 A A 0.0000
110 L A 0.0000
111 L A -1.2864
112 E A -1.9777
113 T A 0.0000
114 I A 0.0000
115 K A -2.8279
116 E A -2.9198
117 A A -2.3834
118 S A 0.0000
119 G A -2.5097
120 E A -3.0665
121 K A -2.8476
122 W A -2.3422
123 S A -2.2050
124 E A -2.7526
125 E A -2.8985
126 L A 0.0000
127 S A -1.5366
128 T A -1.1744
129 A A 0.0000
130 W A 0.0000
131 E A -1.1383
132 V A -0.1476
133 A A 0.0000
134 Y A 0.0000
135 E A -1.5895
136 G A -0.9892
137 L A 0.0000
138 A A 0.0000
139 S A -1.0629
140 A A 0.0000
141 I A 0.0000
142 K A -1.7247
143 K A -2.3732
144 A A -1.0844
145 M A -0.6274
146 N A -1.6387
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Laboratory of Theory of Biopolymers 2018