Project name: query_structure

Status: done

Started: 2026-03-16 22:48:22
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Chain sequence(s) B: SPKKTHWTAEITPNLHGSEVVVAGWVAHLGDYGRVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAEELSREDVVVIKGIVEATTVTRWDTGVEIFPSEIWILNKA
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:07)
Show buried residues

Minimal score value
-3.2162
Maximal score value
1.3293
Average score
-0.8602
Total score value
-91.1759

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 S B -0.4430
3 P B -1.2152
4 K B -2.2161
5 K B -1.6395
6 T B -1.3135
7 H B -0.8531
8 W B -0.7053
9 T B 0.0000
10 A B -0.9553
11 E B -1.5094
12 I B 0.0000
13 T B -1.1623
14 P B -1.2353
15 N B -1.8485
16 L B -1.5075
17 H B -1.9047
18 G B -1.4225
19 S B -1.3800
20 E B -1.9016
21 V B 0.0000
22 V B 0.0000
23 V B 0.0000
24 A B -0.1056
25 G B -0.2810
26 W B -1.0208
27 V B 0.0000
28 A B -1.4646
29 H B -1.7061
30 L B -0.9205
31 G B 0.0000
32 D B -1.3709
33 Y B -0.1137
34 G B -1.3228
35 R B -2.4744
36 V B -1.1964
37 K B -0.8694
38 I B -0.1903
39 V B 0.0000
40 K B -1.0510
41 V B 0.0000
42 S B 0.0000
43 D B -1.3876
44 R B -2.9890
45 E B -3.1178
46 G B -2.0572
47 G B -1.8199
48 A B -1.1375
49 A B -0.9019
50 V B 0.0000
51 P B 0.0000
52 V B 0.0000
53 Y B -0.2035
54 L B 0.0000
55 E B -2.1811
56 R B -3.1987
57 G B -2.4971
58 K B -2.5449
59 T B 0.0000
60 P B -2.0876
61 D B -3.2162
62 H B -2.4299
63 L B 0.0000
64 F B 0.0000
65 K B -2.5819
66 V B -1.3341
67 F B 0.0000
68 A B -1.5753
69 E B -2.1742
70 L B 0.0000
71 S B -2.0601
72 R B -3.0397
73 E B -3.0003
74 D B 0.0000
75 V B -0.0215
76 V B 0.0000
77 V B 0.0000
78 I B 0.0000
79 K B -1.2428
80 G B 0.0000
81 I B -0.4678
82 V B 0.0000
83 E B -1.1973
84 A B -0.8011
85 T B -0.0413
86 T B 0.5688
87 V B 1.3293
88 T B 0.1079
89 R B -1.0741
90 W B 0.3299
91 D B 0.0835
92 T B 0.1618
93 G B 0.0000
94 V B 0.0000
95 E B -0.4792
96 I B 0.0000
97 F B -0.3081
98 P B 0.0000
99 S B -0.7060
100 E B -0.6378
101 I B 0.0000
102 W B 1.0791
103 I B 0.8695
104 L B 0.9219
105 N B -1.0253
106 K B -2.1868
107 A B -1.6027
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Laboratory of Theory of Biopolymers 2018