| Chain sequence(s) |
B: SPKKTHWTAEITPNLHGSEVVVAGWVAHLGDYGRVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAEELSREDVVVIKGIVEATTVTRWDTGVEIFPSEIWILNKA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | S | B | -0.4430 | |
| 3 | P | B | -1.2152 | |
| 4 | K | B | -2.2161 | |
| 5 | K | B | -1.6395 | |
| 6 | T | B | -1.3135 | |
| 7 | H | B | -0.8531 | |
| 8 | W | B | -0.7053 | |
| 9 | T | B | 0.0000 | |
| 10 | A | B | -0.9553 | |
| 11 | E | B | -1.5094 | |
| 12 | I | B | 0.0000 | |
| 13 | T | B | -1.1623 | |
| 14 | P | B | -1.2353 | |
| 15 | N | B | -1.8485 | |
| 16 | L | B | -1.5075 | |
| 17 | H | B | -1.9047 | |
| 18 | G | B | -1.4225 | |
| 19 | S | B | -1.3800 | |
| 20 | E | B | -1.9016 | |
| 21 | V | B | 0.0000 | |
| 22 | V | B | 0.0000 | |
| 23 | V | B | 0.0000 | |
| 24 | A | B | -0.1056 | |
| 25 | G | B | -0.2810 | |
| 26 | W | B | -1.0208 | |
| 27 | V | B | 0.0000 | |
| 28 | A | B | -1.4646 | |
| 29 | H | B | -1.7061 | |
| 30 | L | B | -0.9205 | |
| 31 | G | B | 0.0000 | |
| 32 | D | B | -1.3709 | |
| 33 | Y | B | -0.1137 | |
| 34 | G | B | -1.3228 | |
| 35 | R | B | -2.4744 | |
| 36 | V | B | -1.1964 | |
| 37 | K | B | -0.8694 | |
| 38 | I | B | -0.1903 | |
| 39 | V | B | 0.0000 | |
| 40 | K | B | -1.0510 | |
| 41 | V | B | 0.0000 | |
| 42 | S | B | 0.0000 | |
| 43 | D | B | -1.3876 | |
| 44 | R | B | -2.9890 | |
| 45 | E | B | -3.1178 | |
| 46 | G | B | -2.0572 | |
| 47 | G | B | -1.8199 | |
| 48 | A | B | -1.1375 | |
| 49 | A | B | -0.9019 | |
| 50 | V | B | 0.0000 | |
| 51 | P | B | 0.0000 | |
| 52 | V | B | 0.0000 | |
| 53 | Y | B | -0.2035 | |
| 54 | L | B | 0.0000 | |
| 55 | E | B | -2.1811 | |
| 56 | R | B | -3.1987 | |
| 57 | G | B | -2.4971 | |
| 58 | K | B | -2.5449 | |
| 59 | T | B | 0.0000 | |
| 60 | P | B | -2.0876 | |
| 61 | D | B | -3.2162 | |
| 62 | H | B | -2.4299 | |
| 63 | L | B | 0.0000 | |
| 64 | F | B | 0.0000 | |
| 65 | K | B | -2.5819 | |
| 66 | V | B | -1.3341 | |
| 67 | F | B | 0.0000 | |
| 68 | A | B | -1.5753 | |
| 69 | E | B | -2.1742 | |
| 70 | L | B | 0.0000 | |
| 71 | S | B | -2.0601 | |
| 72 | R | B | -3.0397 | |
| 73 | E | B | -3.0003 | |
| 74 | D | B | 0.0000 | |
| 75 | V | B | -0.0215 | |
| 76 | V | B | 0.0000 | |
| 77 | V | B | 0.0000 | |
| 78 | I | B | 0.0000 | |
| 79 | K | B | -1.2428 | |
| 80 | G | B | 0.0000 | |
| 81 | I | B | -0.4678 | |
| 82 | V | B | 0.0000 | |
| 83 | E | B | -1.1973 | |
| 84 | A | B | -0.8011 | |
| 85 | T | B | -0.0413 | |
| 86 | T | B | 0.5688 | |
| 87 | V | B | 1.3293 | |
| 88 | T | B | 0.1079 | |
| 89 | R | B | -1.0741 | |
| 90 | W | B | 0.3299 | |
| 91 | D | B | 0.0835 | |
| 92 | T | B | 0.1618 | |
| 93 | G | B | 0.0000 | |
| 94 | V | B | 0.0000 | |
| 95 | E | B | -0.4792 | |
| 96 | I | B | 0.0000 | |
| 97 | F | B | -0.3081 | |
| 98 | P | B | 0.0000 | |
| 99 | S | B | -0.7060 | |
| 100 | E | B | -0.6378 | |
| 101 | I | B | 0.0000 | |
| 102 | W | B | 1.0791 | |
| 103 | I | B | 0.8695 | |
| 104 | L | B | 0.9219 | |
| 105 | N | B | -1.0253 | |
| 106 | K | B | -2.1868 | |
| 107 | A | B | -1.6027 |