Project name: 2510-18.pdb

Status: done

Started: 2026-03-12 01:09:07
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Chain sequence(s) H: EVQLVQSGAEVKKPGASVKVSCKASGYTFTSYTIHWVRQAPGQGLEWMGYINPSSGYTNYNQKFKDKATMTRDTSTSTVYMELSSLRSEDTAVYYCARGGLGWAYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQEISGYLSWLQQKPGGAIKRLIYAASTLDSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCLQYASYPLTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:42)
Show buried residues

Minimal score value
-3.505
Maximal score value
1.1037
Average score
-0.5346
Total score value
-119.2157

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9944
2 V H -0.9726
3 Q H -0.9008
4 L H 0.0000
5 V H 0.8557
6 Q H 0.0000
7 S H -0.3620
8 G H -0.3879
9 A H 0.3096
11 E H 0.1791
12 V H 1.0858
13 K H -0.9185
14 K H -2.2332
15 P H -2.2016
16 G H -1.6565
17 A H -1.2923
18 S H -1.3430
19 V H 0.0000
20 K H -1.7631
21 V H 0.0000
22 S H -0.4768
23 C H 0.0000
24 K H -0.6813
25 A H 0.0000
26 S H -0.7423
27 G H -1.1023
28 Y H -0.3819
29 T H -0.0265
30 F H 0.0000
35 T H -0.2499
36 S H -0.0653
37 Y H 0.2603
38 T H 0.0772
39 I H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.4422
45 A H -0.8454
46 P H -1.0026
47 G H -1.2098
48 Q H -1.8489
49 G H -1.3371
50 L H 0.0000
51 E H -0.5833
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 I H 0.0000
57 N H -0.0585
58 P H 0.0000
59 S H -0.2742
62 S H -0.0732
63 G H 0.0383
64 Y H 0.9399
65 T H 0.3814
66 N H -0.1229
67 Y H -1.1324
68 N H -1.8334
69 Q H -2.8230
70 K H -3.0997
71 F H 0.0000
72 K H -3.5050
74 D H -3.2226
75 K H -2.2080
76 A H 0.0000
77 T H -1.0964
78 M H 0.0000
79 T H -0.4277
80 R H -0.7975
81 D H -0.9625
82 T H -0.5947
83 S H -0.4882
84 T H -0.5900
85 S H -0.6913
86 T H 0.0000
87 V H 0.0000
88 Y H -0.6368
89 M H 0.0000
90 E H -1.2270
91 L H 0.0000
92 S H -1.3302
93 S H -1.4424
94 L H 0.0000
95 R H -3.1579
96 S H -2.3736
97 E H -2.4581
98 D H 0.0000
99 T H -0.6553
100 A H 0.0000
101 V H 0.6618
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.1390
107 G H 0.0000
108 G H 0.2175
109 L H 1.1037
114 G H 0.0000
115 W H 0.0000
116 A H 0.2563
117 Y H 0.3051
118 W H 0.1052
119 G H -0.2007
120 Q H -0.8311
121 G H -0.0909
122 T H 0.0000
123 L H 1.0183
124 V H 0.0000
125 T H -0.0843
126 V H 0.0000
127 S H -0.9964
128 S H -1.2251
1 D L -2.0227
2 I L -1.7470
3 Q L -2.2546
4 M L 0.0000
5 T L -1.3964
6 Q L 0.0000
7 S L -0.7400
8 P L -0.5962
9 S L -0.8952
10 S L -1.0166
11 L L -0.5348
12 S L -0.8173
13 A L 0.0000
14 S L -0.1707
15 V L 0.7424
16 G L -0.4345
17 D L -1.4053
18 R L -2.1192
19 V L 0.0000
20 T L -0.5469
21 I L 0.0000
22 T L -0.7847
23 C L 0.0000
24 R L -2.8244
25 A L 0.0000
26 S L -2.2124
27 Q L -2.8690
28 E L -2.6941
29 I L 0.0000
36 S L -0.7813
37 G L -0.1731
38 Y L 0.9300
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L -0.6660
44 Q L -0.8526
45 K L -1.2095
46 P L -0.7760
47 G L -0.9412
48 G L -0.7433
49 A L -0.8027
50 I L -0.5926
51 K L -0.7614
52 R L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.7180
56 A L 0.4996
57 A L 0.0000
65 S L -0.2441
66 T L 0.1132
67 L L 0.3400
68 D L 0.0000
69 S L -0.3233
70 G L -0.5471
71 V L 0.0000
72 P L -0.4144
74 S L -0.4354
75 R L -0.8395
76 F L 0.0000
77 S L -0.3498
78 G L -0.4099
79 S L -0.9188
80 R L -1.6723
83 S L -1.2820
84 G L -1.6502
85 T L -2.0871
86 D L -1.8972
87 F L 0.0000
88 T L -0.8122
89 L L 0.0000
90 T L -0.6375
91 I L 0.0000
92 S L -1.3789
93 S L -1.0252
94 L L 0.0000
95 Q L -0.5564
96 P L -0.8029
97 E L -1.9172
98 D L 0.0000
99 F L -0.7459
100 A L 0.0000
101 T L -1.0380
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.8358
108 A L 0.3011
109 S L 0.1248
114 Y L 0.5174
115 P L -0.3078
116 L L 0.0000
117 T L -0.5829
118 F L 0.0000
119 G L 0.0000
120 Q L -1.7785
121 G L 0.0000
122 T L 0.0000
123 K L -1.8822
124 L L 0.0000
125 E L -1.3467
126 I L 0.6388
127 K L -0.9134
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Laboratory of Theory of Biopolymers 2018