Project name: query_structure

Status: done

Started: 2026-03-16 23:38:59
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Chain sequence(s) A: GSVSSVPTKLEVVAATPTSLLISWDAMSDWYYWVDYYRITYGETGGNSPVQEFTVPGSYSTATISGLKPGVDYTITVYASDDVWGDYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-2.5452
Maximal score value
1.8642
Average score
-0.3178
Total score value
-30.5089

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1942
2 S A 0.3312
3 V A 1.4581
4 S A 0.4950
5 S A 0.1245
6 V A 0.0311
7 P A 0.0000
8 T A -1.1961
9 K A -2.5452
10 L A 0.0000
11 E A -1.4414
12 V A 0.3577
13 V A 1.6670
14 A A 0.9560
15 A A 0.2960
16 T A -0.5329
17 P A -1.1387
18 T A -1.0013
19 S A -0.5345
20 L A 0.0000
21 L A 0.8236
22 I A 0.0000
23 S A -0.4839
24 W A 0.0000
25 D A -2.3586
26 A A -1.1046
27 M A -0.3705
28 S A -0.4342
29 D A -0.6204
30 W A 1.2644
31 Y A 1.8642
32 Y A 1.7237
33 W A 1.5500
34 V A 0.0000
35 D A -0.2332
36 Y A 0.1056
37 Y A 0.0000
38 R A -0.7018
39 I A 0.0000
40 T A 0.0000
41 Y A -0.1459
42 G A 0.0000
43 E A -1.4882
44 T A -1.2154
45 G A -1.2116
46 G A -1.3644
47 N A -1.5138
48 S A -0.8040
49 P A -0.2322
50 V A 0.6065
51 Q A -0.5221
52 E A -1.0774
53 F A -0.4020
54 T A -0.1700
55 V A 0.0000
56 P A 0.1483
57 G A 0.4599
58 S A 0.4906
59 Y A 0.9811
60 S A 0.0789
61 T A 0.1741
62 A A 0.0000
63 T A 0.2439
64 I A 0.0000
65 S A -0.6598
66 G A -1.0343
67 L A 0.0000
68 K A -2.3629
69 P A -1.6603
70 G A -1.4398
71 V A -1.3778
72 D A -2.0236
73 Y A 0.0000
74 T A -0.7594
75 I A 0.0000
76 T A -0.1676
77 V A 0.0000
78 Y A -0.3947
79 A A 0.0000
80 S A 0.0000
81 D A 0.0000
82 D A -0.7158
83 V A 1.3781
84 W A 1.1709
85 G A -0.4917
86 D A -1.4790
87 Y A -0.5361
88 S A -0.4680
89 P A -0.3984
90 I A -0.0298
91 S A -0.5263
92 I A -0.6079
93 N A -1.6559
94 Y A -1.4200
95 R A -2.5239
96 T A -1.5178
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Laboratory of Theory of Biopolymers 2018