| Chain sequence(s) |
A: GSVSSVPTKLEVVAATPTSLLISWDAMSDWYYWVDYYRITYGETGGNSPVQEFTVPGSYSTATISGLKPGVDYTITVYASDDVWGDYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1942 | |
| 2 | S | A | 0.3312 | |
| 3 | V | A | 1.4581 | |
| 4 | S | A | 0.4950 | |
| 5 | S | A | 0.1245 | |
| 6 | V | A | 0.0311 | |
| 7 | P | A | 0.0000 | |
| 8 | T | A | -1.1961 | |
| 9 | K | A | -2.5452 | |
| 10 | L | A | 0.0000 | |
| 11 | E | A | -1.4414 | |
| 12 | V | A | 0.3577 | |
| 13 | V | A | 1.6670 | |
| 14 | A | A | 0.9560 | |
| 15 | A | A | 0.2960 | |
| 16 | T | A | -0.5329 | |
| 17 | P | A | -1.1387 | |
| 18 | T | A | -1.0013 | |
| 19 | S | A | -0.5345 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | 0.8236 | |
| 22 | I | A | 0.0000 | |
| 23 | S | A | -0.4839 | |
| 24 | W | A | 0.0000 | |
| 25 | D | A | -2.3586 | |
| 26 | A | A | -1.1046 | |
| 27 | M | A | -0.3705 | |
| 28 | S | A | -0.4342 | |
| 29 | D | A | -0.6204 | |
| 30 | W | A | 1.2644 | |
| 31 | Y | A | 1.8642 | |
| 32 | Y | A | 1.7237 | |
| 33 | W | A | 1.5500 | |
| 34 | V | A | 0.0000 | |
| 35 | D | A | -0.2332 | |
| 36 | Y | A | 0.1056 | |
| 37 | Y | A | 0.0000 | |
| 38 | R | A | -0.7018 | |
| 39 | I | A | 0.0000 | |
| 40 | T | A | 0.0000 | |
| 41 | Y | A | -0.1459 | |
| 42 | G | A | 0.0000 | |
| 43 | E | A | -1.4882 | |
| 44 | T | A | -1.2154 | |
| 45 | G | A | -1.2116 | |
| 46 | G | A | -1.3644 | |
| 47 | N | A | -1.5138 | |
| 48 | S | A | -0.8040 | |
| 49 | P | A | -0.2322 | |
| 50 | V | A | 0.6065 | |
| 51 | Q | A | -0.5221 | |
| 52 | E | A | -1.0774 | |
| 53 | F | A | -0.4020 | |
| 54 | T | A | -0.1700 | |
| 55 | V | A | 0.0000 | |
| 56 | P | A | 0.1483 | |
| 57 | G | A | 0.4599 | |
| 58 | S | A | 0.4906 | |
| 59 | Y | A | 0.9811 | |
| 60 | S | A | 0.0789 | |
| 61 | T | A | 0.1741 | |
| 62 | A | A | 0.0000 | |
| 63 | T | A | 0.2439 | |
| 64 | I | A | 0.0000 | |
| 65 | S | A | -0.6598 | |
| 66 | G | A | -1.0343 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | -2.3629 | |
| 69 | P | A | -1.6603 | |
| 70 | G | A | -1.4398 | |
| 71 | V | A | -1.3778 | |
| 72 | D | A | -2.0236 | |
| 73 | Y | A | 0.0000 | |
| 74 | T | A | -0.7594 | |
| 75 | I | A | 0.0000 | |
| 76 | T | A | -0.1676 | |
| 77 | V | A | 0.0000 | |
| 78 | Y | A | -0.3947 | |
| 79 | A | A | 0.0000 | |
| 80 | S | A | 0.0000 | |
| 81 | D | A | 0.0000 | |
| 82 | D | A | -0.7158 | |
| 83 | V | A | 1.3781 | |
| 84 | W | A | 1.1709 | |
| 85 | G | A | -0.4917 | |
| 86 | D | A | -1.4790 | |
| 87 | Y | A | -0.5361 | |
| 88 | S | A | -0.4680 | |
| 89 | P | A | -0.3984 | |
| 90 | I | A | -0.0298 | |
| 91 | S | A | -0.5263 | |
| 92 | I | A | -0.6079 | |
| 93 | N | A | -1.6559 | |
| 94 | Y | A | -1.4200 | |
| 95 | R | A | -2.5239 | |
| 96 | T | A | -1.5178 |