| Chain sequence(s) |
A: VGERCCKNGKRGCGRWCRDHSRCC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 0.6175 | |
| 2 | G | A | 0.0000 | |
| 3 | E | A | -2.8298 | |
| 4 | R | A | -3.2115 | |
| 5 | C | A | 0.0000 | |
| 6 | C | A | -1.9137 | |
| 7 | K | A | -3.2677 | |
| 8 | N | A | -3.0244 | |
| 9 | G | A | -2.2615 | |
| 10 | K | A | -2.6688 | |
| 11 | R | A | -3.2463 | |
| 12 | G | A | -2.8176 | |
| 13 | C | A | -1.8188 | |
| 14 | G | A | -2.2043 | |
| 15 | R | A | -3.0357 | |
| 16 | W | A | -2.0029 | |
| 17 | C | A | 0.0000 | |
| 18 | R | A | -3.7375 | |
| 19 | D | A | -3.5276 | |
| 20 | H | A | -2.5975 | |
| 21 | S | A | 0.0000 | |
| 22 | R | A | -2.4431 | |
| 23 | C | A | -1.2829 | |
| 24 | C | A | -0.9104 |