| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYQHETADVRVSFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGHPLPSAPPPSPLYVPPPPTSPYAVLPSYNYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9404 | |
| 2 | L | A | 1.9622 | |
| 3 | P | A | 0.6652 | |
| 4 | P | A | 0.3602 | |
| 5 | T | A | 0.1156 | |
| 6 | T | A | 0.1234 | |
| 7 | P | A | 0.1554 | |
| 8 | V | A | 1.2344 | |
| 9 | A | A | 0.0751 | |
| 10 | K | A | -1.0485 | |
| 11 | V | A | -0.2084 | |
| 12 | Q | A | -1.4401 | |
| 13 | S | A | -1.5780 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4445 | |
| 16 | E | A | -2.4523 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4548 | |
| 20 | P | A | 0.1256 | |
| 21 | T | A | 0.1831 | |
| 22 | S | A | -0.0927 | |
| 23 | L | A | 0.1365 | |
| 24 | F | A | -0.0257 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2247 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7715 | |
| 31 | R | A | -2.6314 | |
| 32 | L | A | -0.7717 | |
| 33 | L | A | 1.1717 | |
| 34 | T | A | 1.3678 | |
| 35 | V | A | 1.8171 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2661 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2030 | |
| 40 | A | A | 0.0254 | |
| 41 | D | A | 0.0634 | |
| 42 | I | A | 1.8631 | |
| 43 | V | A | 2.4831 | |
| 44 | V | A | 1.7066 | |
| 45 | N | A | -0.5372 | |
| 46 | G | A | -0.3464 | |
| 47 | K | A | -0.1385 | |
| 48 | V | A | 2.1841 | |
| 49 | L | A | 2.5441 | |
| 50 | V | A | 1.7005 | |
| 51 | P | A | 0.6592 | |
| 52 | K | A | -0.0809 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1320 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3888 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2608 | |
| 70 | K | A | -1.7828 | |
| 71 | F | A | -0.6344 | |
| 72 | A | A | -0.5776 | |
| 73 | L | A | -0.8643 | |
| 74 | P | A | -1.2639 | |
| 75 | Q | A | -2.5039 | |
| 76 | K | A | -3.1096 | |
| 77 | D | A | -2.9915 | |
| 78 | F | A | -1.6539 | |
| 79 | Y | A | -1.9008 | |
| 80 | D | A | -2.7085 | |
| 81 | P | A | -2.3099 | |
| 82 | E | A | -3.0549 | |
| 83 | K | A | -3.4014 | |
| 84 | E | A | -2.4685 | |
| 85 | R | A | -1.2966 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6843 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9599 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3692 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6990 | |
| 99 | G | A | -0.5259 | |
| 100 | P | A | -0.3756 | |
| 101 | L | A | 0.1024 | |
| 102 | G | A | -0.1835 | |
| 103 | K | A | -0.6034 | |
| 104 | G | A | -0.4483 | |
| 105 | T | A | -0.4503 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0923 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3261 | |
| 110 | L | A | 0.4222 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9901 | |
| 113 | K | A | -0.3547 | |
| 114 | L | A | -1.0477 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4896 | |
| 117 | T | A | -1.1078 | |
| 118 | E | A | -1.8242 | |
| 119 | N | A | -2.1606 | |
| 120 | P | A | -1.9549 | |
| 121 | T | A | -1.5870 | |
| 122 | E | A | -2.2421 | |
| 123 | Y | A | -0.7836 | |
| 124 | Q | A | -1.5639 | |
| 125 | H | A | -1.3818 | |
| 126 | E | A | -1.7897 | |
| 127 | T | A | -1.4345 | |
| 128 | A | A | -1.1402 | |
| 129 | D | A | -1.9473 | |
| 130 | V | A | -1.0923 | |
| 131 | R | A | -0.7804 | |
| 132 | V | A | 0.2939 | |
| 133 | S | A | 0.1984 | |
| 134 | F | A | 0.1599 | |
| 135 | S | A | -0.1419 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5205 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5753 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2189 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1007 | |
| 157 | D | A | 0.2656 | |
| 158 | I | A | 0.8200 | |
| 159 | A | A | 0.1094 | |
| 160 | E | A | -1.4854 | |
| 161 | P | A | -0.2233 | |
| 162 | C | A | 0.1946 | |
| 163 | P | A | -0.1573 | |
| 164 | G | A | -0.0496 | |
| 165 | L | A | 0.6537 | |
| 166 | P | A | -0.0840 | |
| 167 | P | A | -0.3250 | |
| 168 | G | A | -0.4161 | |
| 169 | A | A | -0.0190 | |
| 170 | C | A | 0.7403 | |
| 171 | P | A | 0.5548 | |
| 172 | P | A | 0.7549 | |
| 173 | I | A | 2.0479 | |
| 174 | Q | A | 0.8475 | |
| 175 | L | A | 1.4496 | |
| 176 | V | A | 0.8243 | |
| 177 | N | A | -0.3110 | |
| 178 | S | A | 0.0278 | |
| 179 | V | A | 0.4313 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3748 | |
| 182 | D | A | 0.0771 | |
| 183 | G | A | -0.1602 | |
| 184 | D | A | -0.5501 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1168 | |
| 190 | F | A | 0.0643 | |
| 191 | G | A | -0.1080 | |
| 192 | N | A | -0.2739 | |
| 193 | M | A | -0.1423 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4071 | |
| 197 | E | A | -2.6527 | |
| 198 | L | A | -1.2358 | |
| 199 | Q | A | -2.5552 | |
| 200 | Q | A | -3.3230 | |
| 201 | D | A | -3.5849 | |
| 202 | R | A | -3.3245 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4608 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3750 | |
| 211 | S | A | -1.7055 | |
| 212 | T | A | -1.4599 | |
| 213 | R | A | -2.1345 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1655 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3319 | |
| 220 | L | A | 0.5899 | |
| 221 | K | A | -1.1452 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8243 | |
| 224 | N | A | -1.5071 | |
| 225 | E | A | -1.2455 | |
| 226 | A | A | -0.6129 | |
| 227 | Y | A | -0.3638 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6606 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0776 | |
| 234 | F | A | 0.2551 | |
| 235 | G | A | -0.8168 | |
| 236 | R | A | -2.5788 | |
| 237 | R | A | -2.8193 | |
| 238 | E | A | -2.0490 | |
| 239 | Q | A | -0.1545 | |
| 240 | V | A | 1.4093 | |
| 241 | Y | A | 1.0850 | |
| 242 | A | A | 0.1445 | |
| 243 | R | A | -1.1166 | |
| 244 | H | A | -0.8977 | |
| 245 | F | A | 0.0180 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4536 | |
| 249 | S | A | -1.0415 | |
| 250 | G | A | -0.9085 | |
| 251 | P | A | -1.0217 | |
| 252 | D | A | -1.1948 | |
| 253 | G | A | -1.2152 | |
| 254 | H | A | -1.3544 | |
| 255 | P | A | -0.7652 | |
| 256 | L | A | 0.2666 | |
| 257 | P | A | -0.1138 | |
| 258 | S | A | 0.0593 | |
| 259 | A | A | 0.1845 | |
| 260 | P | A | -0.3597 | |
| 261 | P | A | -0.0368 | |
| 262 | P | A | 0.0750 | |
| 263 | S | A | 0.5274 | |
| 264 | P | A | 0.6970 | |
| 265 | L | A | 1.8785 | |
| 266 | Y | A | 1.7815 | |
| 267 | V | A | 1.9416 | |
| 268 | P | A | 0.9838 | |
| 269 | P | A | 0.7399 | |
| 270 | P | A | -0.1060 | |
| 271 | P | A | -0.0744 | |
| 272 | T | A | 0.0078 | |
| 273 | S | A | 0.2942 | |
| 274 | P | A | 0.5735 | |
| 275 | Y | A | 1.5601 | |
| 276 | A | A | 1.3292 | |
| 277 | V | A | 2.1177 | |
| 278 | L | A | 1.6379 | |
| 279 | P | A | 0.3411 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.2880 | |
| 282 | N | A | -0.1950 | |
| 283 | Y | A | 1.1730 | |
| 284 | F | A | 0.8532 | |
| 285 | G | A | 0.2123 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8991 | |
| 291 | L | A | 1.6242 | |
| 292 | V | A | 0.6590 | |
| 293 | S | A | -0.1468 | |
| 294 | S | A | -0.9514 | |
| 295 | D | A | -1.8418 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1055 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6339 | |
| 301 | R | A | -1.8300 | |
| 302 | P | A | -0.9432 | |
| 303 | F | A | -0.1915 | |
| 304 | W | A | -0.5688 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0892 | |
| 307 | R | A | -2.8378 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2547 | |
| 310 | G | A | -1.2240 | |
| 311 | N | A | -1.2901 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8478 | |
| 319 | N | A | -0.9446 | |
| 320 | E | A | -1.0439 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3217 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0719 | |
| 333 | N | A | 0.5727 | |
| 334 | F | A | 1.7896 | |
| 335 | T | A | 0.9541 | |
| 336 | I | A | 0.5521 | |
| 337 | S | A | -0.9053 | |
| 338 | Q | A | -1.7521 | |
| 339 | Q | A | -1.4813 | |
| 340 | L | A | 0.3979 | |
| 341 | C | A | 0.1108 | |
| 342 | T | A | -0.3758 | |
| 343 | P | A | -0.9333 | |
| 344 | E | A | -2.2602 | |
| 345 | N | A | -2.0415 | |
| 346 | N | A | -1.3973 | |
| 347 | V | A | 0.6284 | |
| 348 | Y | A | 0.9732 | |
| 349 | D | A | -0.3079 | |
| 350 | P | A | -0.4470 | |
| 351 | S | A | -0.3794 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8633 | |
| 354 | K | A | -1.7682 | |
| 355 | N | A | -1.6256 | |
| 356 | Y | A | 0.1678 | |
| 357 | L | A | 0.7670 | |
| 358 | R | A | 1.0152 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3727 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0848 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0463 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6793 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3044 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3112 | |
| 376 | L | A | -1.7026 | |
| 377 | D | A | -1.9724 | |
| 378 | P | A | -1.0302 | |
| 379 | G | A | -1.0104 | |
| 380 | V | A | -0.9300 | |
| 381 | L | A | -0.5282 | |
| 382 | A | A | -0.6531 | |
| 383 | H | A | -0.8126 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4096 | |
| 386 | T | A | -0.5545 | |
| 387 | M | A | -0.3035 | |
| 388 | N | A | -0.8661 | |
| 389 | P | A | -1.2526 | |
| 390 | T | A | -1.4623 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4348 | |
| 393 | E | A | -2.7698 | |
| 394 | N | A | -2.4170 | |
| 395 | W | A | -1.3496 | |
| 396 | N | A | -1.0117 | |
| 397 | L | A | -0.1333 | |
| 398 | G | A | 0.5667 | |
| 399 | F | A | 2.4355 | |
| 400 | V | A | 1.8458 | |
| 401 | P | A | 0.0660 | |
| 402 | P | A | -1.8611 | |
| 403 | K | A | -3.3563 | |
| 404 | E | A | -3.8348 | |
| 405 | R | A | -4.0311 | |
| 406 | E | A | -3.8447 | |
| 407 | D | A | -2.8928 | |
| 408 | P | A | -1.7814 | |
| 409 | Y | A | -0.9812 | |
| 410 | K | A | -2.1203 | |
| 411 | G | A | -0.6300 | |
| 412 | L | A | 0.6738 | |
| 413 | I | A | 1.5881 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3810 | |
| 416 | E | A | -1.6612 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9149 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9980 | |
| 421 | E | A | -2.7038 | |
| 422 | R | A | -2.4612 | |
| 423 | F | A | -1.1944 | |
| 424 | S | A | -1.3963 | |
| 425 | Q | A | -1.7896 | |
| 426 | D | A | -2.8604 | |
| 427 | L | A | -1.9675 | |
| 428 | D | A | -2.7631 | |
| 429 | Q | A | -2.6036 | |
| 430 | F | A | -1.4259 | |
| 431 | A | A | -0.9026 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6016 | |
| 435 | K | A | -0.7296 | |
| 436 | F | A | 0.1297 | |
| 437 | L | A | 1.0179 | |
| 438 | Y | A | 0.8148 | |
| 439 | Q | A | -0.2814 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine