Project name: Mb5-11_LLFFVF

Status: done

Started: 2026-07-06 06:36:37
Settings
Chain sequence(s) A: MQANSGSLEVVEASPTSLQLSWDAFHRYHNGFTHPVRYYRLTYGETGGNSPVQEFTVPGSKSTATFSGLKPGVDYTFTVYAVTWYPRYGYGESGPVSFNYRTELDKPSQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-2.7943
Maximal score value
1.4982
Average score
-0.7359
Total score value
-80.2155

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3696
2 Q A -1.0585
3 A A 0.0000
4 N A -2.0081
5 S A -1.4000
6 G A -1.5859
7 S A -1.1851
8 L A 0.0000
9 E A -1.7216
10 V A -0.2810
11 V A 0.2161
12 E A -1.2966
13 A A -0.8766
14 S A -1.2641
15 P A -1.9502
16 T A -1.2536
17 S A -1.1399
18 L A 0.0000
19 Q A -0.6635
20 L A 0.0000
21 S A -1.0796
22 W A 0.0000
23 D A -2.5736
24 A A -1.5722
25 F A 0.0000
26 H A -1.2097
27 R A 0.0000
28 Y A 0.9463
29 H A 0.2420
30 N A -0.6983
31 G A 0.1370
32 F A 1.4982
33 T A 0.7410
34 H A 0.0364
35 P A -0.4409
36 V A -0.9981
37 R A -1.4503
38 Y A -0.8630
39 Y A 0.0000
40 R A -0.8615
41 L A 0.0000
42 T A 0.0000
43 Y A -0.3974
44 G A -0.7320
45 E A -1.6344
46 T A -1.2796
47 G A -1.2436
48 G A -1.3888
49 N A -1.5353
50 S A -0.9040
51 P A -0.4112
52 V A 0.2827
53 Q A -1.2178
54 E A -1.8065
55 F A -0.6690
56 T A -0.1986
57 V A -0.3885
58 P A -0.9339
59 G A -1.1917
60 S A -1.1205
61 K A -1.4765
62 S A -1.1997
63 T A -0.7252
64 A A 0.0000
65 T A -0.2800
66 F A 0.0000
67 S A -0.7528
68 G A -1.0028
69 L A 0.0000
70 K A -2.5135
71 P A -2.1392
72 G A -1.5275
73 V A -1.3670
74 D A -2.3393
75 Y A 0.0000
76 T A -0.8108
77 F A 0.0000
78 T A 0.0000
79 V A 0.0000
80 Y A -0.3204
81 A A 0.0000
82 V A 0.0000
83 T A 0.0000
84 W A 0.5045
85 Y A 0.0000
86 P A -0.4620
87 R A -1.1061
88 Y A 0.7125
89 G A 0.7246
90 Y A 1.1219
91 G A 0.4570
92 E A -0.5070
93 S A 0.0000
94 G A -0.9040
95 P A -0.5343
96 V A -0.2752
97 S A -0.3613
98 F A -0.5527
99 N A -1.6467
100 Y A -1.6249
101 R A -2.7776
102 T A 0.0000
103 E A -2.5931
104 L A -1.3131
105 D A -2.7434
106 K A -2.7943
107 P A -1.7783
108 S A -1.6335
109 Q A -1.6584
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Laboratory of Theory of Biopolymers 2018