| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGASRPISSYSWAWFRQAPGQGLEAVAAIGGDGSYSVYHPAVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGGGGPSDGKEYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5861 | |
| 2 | V | H | -1.3019 | |
| 3 | Q | H | -1.2494 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.9110 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1865 | |
| 8 | G | H | -0.5054 | |
| 9 | G | H | 0.2047 | |
| 10 | G | H | 0.8771 | |
| 11 | L | H | 1.3862 | |
| 12 | V | H | -0.0590 | |
| 13 | Q | H | -1.3563 | |
| 14 | P | H | -1.6753 | |
| 15 | G | H | -1.4641 | |
| 16 | G | H | -0.9688 | |
| 17 | S | H | -1.1046 | |
| 18 | L | H | -0.6831 | |
| 19 | R | H | -1.6918 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.2961 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2037 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.7465 | |
| 26 | G | H | -1.3633 | |
| 27 | A | H | -1.3407 | |
| 28 | S | H | -1.2574 | |
| 29 | R | H | -1.6658 | |
| 30 | P | H | -1.1405 | |
| 31 | I | H | -1.1467 | |
| 32 | S | H | -1.3572 | |
| 33 | S | H | -0.9691 | |
| 34 | Y | H | 0.0000 | |
| 35 | S | H | -0.6294 | |
| 36 | W | H | 0.0000 | |
| 37 | A | H | 0.0000 | |
| 38 | W | H | 0.0000 | |
| 39 | F | H | 0.0000 | |
| 40 | R | H | 0.0000 | |
| 41 | Q | H | -0.4398 | |
| 42 | A | H | -0.8494 | |
| 43 | P | H | -0.9915 | |
| 44 | G | H | -1.2220 | |
| 45 | Q | H | -1.6516 | |
| 46 | G | H | -0.8286 | |
| 47 | L | H | 0.3831 | |
| 48 | E | H | -0.3668 | |
| 49 | A | H | -0.0761 | |
| 50 | V | H | 0.0000 | |
| 51 | A | H | 0.0000 | |
| 52 | A | H | 0.4233 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | -0.3958 | |
| 55 | G | H | -1.1687 | |
| 56 | D | H | -1.9864 | |
| 57 | G | H | -1.1335 | |
| 58 | S | H | -0.3061 | |
| 59 | Y | H | 0.9972 | |
| 60 | S | H | 1.0325 | |
| 61 | V | H | 1.1023 | |
| 62 | Y | H | -0.0188 | |
| 63 | H | H | -0.5988 | |
| 64 | P | H | -0.8173 | |
| 65 | A | H | -0.8724 | |
| 66 | V | H | 0.0000 | |
| 67 | K | H | -1.8510 | |
| 68 | G | H | -1.4277 | |
| 69 | R | H | 0.0000 | |
| 70 | F | H | 0.0000 | |
| 71 | T | H | -0.5929 | |
| 72 | I | H | 0.0000 | |
| 73 | S | H | -0.3756 | |
| 74 | R | H | -1.4472 | |
| 75 | D | H | -1.8863 | |
| 76 | N | H | -2.4224 | |
| 77 | S | H | -1.8359 | |
| 78 | K | H | -2.5576 | |
| 79 | N | H | -1.9394 | |
| 80 | T | H | -1.1346 | |
| 81 | L | H | 0.0000 | |
| 82 | Y | H | -0.5396 | |
| 83 | L | H | 0.0000 | |
| 84 | Q | H | -0.9722 | |
| 85 | M | H | 0.0000 | |
| 86 | N | H | -1.2683 | |
| 87 | S | H | -1.2193 | |
| 88 | L | H | 0.0000 | |
| 89 | R | H | -2.3685 | |
| 90 | A | H | -1.7814 | |
| 91 | E | H | -2.2524 | |
| 92 | D | H | 0.0000 | |
| 93 | T | H | -0.4332 | |
| 94 | A | H | 0.0000 | |
| 95 | V | H | 0.8315 | |
| 96 | Y | H | 0.0000 | |
| 97 | Y | H | 0.4390 | |
| 98 | C | H | 0.0000 | |
| 99 | A | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | G | H | -1.0537 | |
| 102 | G | H | -1.4787 | |
| 103 | G | H | -1.1390 | |
| 104 | G | H | -1.3397 | |
| 105 | P | H | -1.3429 | |
| 106 | S | H | -1.6807 | |
| 107 | D | H | -2.7568 | |
| 108 | G | H | -2.4462 | |
| 109 | K | H | -2.5188 | |
| 110 | E | H | -1.4908 | |
| 111 | Y | H | -0.4740 | |
| 112 | W | H | 0.0738 | |
| 113 | G | H | -0.0755 | |
| 114 | Q | H | -0.8560 | |
| 115 | G | H | 0.0812 | |
| 116 | T | H | 0.6011 | |
| 117 | L | H | 1.6993 | |
| 118 | V | H | 0.0000 | |
| 119 | T | H | 0.3433 | |
| 120 | V | H | 0.0000 | |
| 121 | S | H | -0.7761 |