| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA I: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA H: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA K: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA J: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA L: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:39)
[INFO] Main: Simulation completed successfully. (00:09:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9992 | |
| 2 | A | A | -1.3781 | |
| 3 | E | A | -2.0736 | |
| 4 | F | A | -0.5846 | |
| 5 | R | A | -2.5908 | |
| 6 | H | A | -2.5412 | |
| 7 | D | A | -2.6633 | |
| 8 | S | A | -1.7406 | |
| 9 | G | A | -1.1192 | |
| 10 | Y | A | 0.0035 | |
| 11 | E | A | -1.2347 | |
| 12 | V | A | -0.2080 | |
| 13 | H | A | -1.4023 | |
| 14 | H | A | -1.2181 | |
| 15 | Q | A | -2.1742 | |
| 16 | K | A | -1.5548 | |
| 17 | L | A | 0.6623 | |
| 18 | V | A | 1.0572 | |
| 19 | F | A | 1.8512 | |
| 20 | F | A | 2.0607 | |
| 21 | A | A | -0.2505 | |
| 22 | E | A | -2.3230 | |
| 23 | D | A | -3.2285 | |
| 24 | V | A | 0.0000 | |
| 25 | G | A | -1.8934 | |
| 26 | S | A | -1.6297 | |
| 27 | N | A | -1.2894 | |
| 28 | K | A | -1.5390 | |
| 29 | G | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | I | A | 0.2685 | |
| 32 | I | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | L | A | 0.6698 | |
| 35 | M | A | 0.0000 | |
| 36 | V | A | 0.8858 | |
| 37 | G | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | V | A | 0.4390 | |
| 40 | V | A | 0.4296 | |
| 41 | I | A | 0.0000 | |
| 42 | A | A | 0.1576 | |
| 1 | D | B | -1.9668 | |
| 2 | A | B | -1.4391 | |
| 3 | E | B | -2.0429 | |
| 4 | F | B | -0.6250 | |
| 5 | R | B | -2.6276 | |
| 6 | H | B | -2.5417 | |
| 7 | D | B | -2.6207 | |
| 8 | S | B | -1.7553 | |
| 9 | G | B | -0.9251 | |
| 10 | Y | B | 0.2924 | |
| 11 | E | B | -0.6938 | |
| 12 | V | B | 0.8802 | |
| 13 | H | B | -0.8946 | |
| 14 | H | B | -2.1919 | |
| 15 | Q | B | -2.0543 | |
| 16 | K | B | -0.9861 | |
| 17 | L | B | 0.9986 | |
| 18 | V | B | 2.7908 | |
| 19 | F | B | 3.0594 | |
| 20 | F | B | 2.5742 | |
| 21 | A | B | 0.5086 | |
| 22 | E | B | -1.5517 | |
| 23 | D | B | -2.1738 | |
| 24 | V | B | -0.7797 | |
| 25 | G | B | -1.3347 | |
| 26 | S | B | -1.3277 | |
| 27 | N | B | -1.8706 | |
| 28 | K | B | -1.5857 | |
| 29 | G | B | -0.7404 | |
| 30 | A | B | -0.2973 | |
| 31 | I | B | 0.0000 | |
| 32 | I | B | 0.5495 | |
| 33 | G | B | 0.2406 | |
| 34 | L | B | 1.1355 | |
| 35 | M | B | 0.0000 | |
| 36 | V | B | 0.0000 | |
| 37 | G | B | 0.0000 | |
| 38 | G | B | 0.6549 | |
| 39 | V | B | 0.0000 | |
| 40 | V | B | 0.0000 | |
| 41 | I | B | 0.0000 | |
| 42 | A | B | 0.0000 | |
| 1 | D | C | -1.9688 | |
| 2 | A | C | -1.3753 | |
| 3 | E | C | -1.9824 | |
| 4 | F | C | -0.5723 | |
| 5 | R | C | -2.5287 | |
| 6 | H | C | -2.5011 | |
| 7 | D | C | -2.5968 | |
| 8 | S | C | -1.7452 | |
| 9 | G | C | -0.8107 | |
| 10 | Y | C | 0.4309 | |
| 11 | E | C | -0.7156 | |
| 12 | V | C | 0.5117 | |
| 13 | H | C | -0.8903 | |
| 14 | H | C | -1.5051 | |
| 15 | Q | C | -1.7205 | |
| 16 | K | C | -0.8434 | |
| 17 | L | C | 0.4083 | |
| 18 | V | C | 0.0000 | |
| 19 | F | C | 1.2114 | |
| 20 | F | C | 0.0000 | |
| 21 | A | C | 0.0000 | |
| 22 | E | C | -2.0919 | |
| 23 | D | C | -2.6246 | |
| 24 | V | C | -1.2124 | |
| 25 | G | C | -1.0876 | |
| 26 | S | C | -0.7997 | |
| 27 | N | C | -0.1863 | |
| 28 | K | C | -0.8668 | |
| 29 | G | C | 0.0000 | |
| 30 | A | C | 0.0000 | |
| 31 | I | C | 0.0000 | |
| 32 | I | C | 0.5321 | |
| 33 | G | C | 0.0000 | |
| 34 | L | C | 0.7787 | |
| 35 | M | C | 0.0000 | |
| 36 | V | C | 0.0000 | |
| 37 | G | C | 0.0000 | |
| 38 | G | C | 0.0000 | |
| 39 | V | C | 0.5034 | |
| 40 | V | C | 0.1013 | |
| 41 | I | C | 0.0000 | |
| 42 | A | C | 0.1510 | |
| 1 | D | D | -2.0165 | |
| 2 | A | D | -1.4059 | |
| 3 | E | D | -2.0840 | |
| 4 | F | D | -0.5913 | |
| 5 | R | D | -2.5999 | |
| 6 | H | D | -2.5387 | |
| 7 | D | D | -2.6833 | |
| 8 | S | D | -1.7481 | |
| 9 | G | D | -1.0012 | |
| 10 | Y | D | 0.2513 | |
| 11 | E | D | -0.9187 | |
| 12 | V | D | 0.2742 | |
| 13 | H | D | -1.4341 | |
| 14 | H | D | -2.3460 | |
| 15 | Q | D | -2.3242 | |
| 16 | K | D | -1.8332 | |
| 17 | L | D | 0.0210 | |
| 18 | V | D | 0.9670 | |
| 19 | F | D | 1.4824 | |
| 20 | F | D | 1.4278 | |
| 21 | A | D | 0.0000 | |
| 22 | E | D | -2.2520 | |
| 23 | D | D | -2.6992 | |
| 24 | V | D | -1.4658 | |
| 25 | G | D | -1.6402 | |
| 26 | S | D | -1.5312 | |
| 27 | N | D | -1.4816 | |
| 28 | K | D | -1.4429 | |
| 29 | G | D | 0.0000 | |
| 30 | A | D | 0.0000 | |
| 31 | I | D | 0.0000 | |
| 32 | I | D | 0.6556 | |
| 33 | G | D | 0.0000 | |
| 34 | L | D | 0.0000 | |
| 35 | M | D | 0.8347 | |
| 36 | V | D | 0.0000 | |
| 37 | G | D | 0.0000 | |
| 38 | G | D | 0.0000 | |
| 39 | V | D | 0.5418 | |
| 40 | V | D | 0.0000 | |
| 41 | I | D | 0.4472 | |
| 42 | A | D | 0.3074 | |
| 1 | D | E | -2.0227 | |
| 2 | A | E | -1.4185 | |
| 3 | E | E | -2.0920 | |
| 4 | F | E | -0.5960 | |
| 5 | R | E | -2.5693 | |
| 6 | H | E | -2.5346 | |
| 7 | D | E | -2.7761 | |
| 8 | S | E | -2.4897 | |
| 9 | G | E | -1.5021 | |
| 10 | Y | E | -0.5213 | |
| 11 | E | E | -1.1497 | |
| 12 | V | E | -0.1683 | |
| 13 | H | E | -1.8272 | |
| 14 | H | E | -1.8581 | |
| 15 | Q | E | -2.3517 | |
| 16 | K | E | -2.1463 | |
| 17 | L | E | -0.6153 | |
| 18 | V | E | 0.1534 | |
| 19 | F | E | 0.9935 | |
| 20 | F | E | 1.4069 | |
| 21 | A | E | -0.4929 | |
| 22 | E | E | -2.0075 | |
| 23 | D | E | -2.5532 | |
| 24 | V | E | -1.7399 | |
| 25 | G | E | -1.8567 | |
| 26 | S | E | -1.7526 | |
| 27 | N | E | -1.8016 | |
| 28 | K | E | -1.3136 | |
| 29 | G | E | 0.0000 | |
| 30 | A | E | -0.3566 | |
| 31 | I | E | 0.1800 | |
| 32 | I | E | 0.0000 | |
| 33 | G | E | 0.0000 | |
| 34 | L | E | 1.0578 | |
| 35 | M | E | 0.0000 | |
| 36 | V | E | 0.0000 | |
| 37 | G | E | 0.0000 | |
| 38 | G | E | 0.5428 | |
| 39 | V | E | 0.0000 | |
| 40 | V | E | 0.3878 | |
| 41 | I | E | 0.6174 | |
| 42 | A | E | -0.0029 | |
| 1 | D | F | -2.0310 | |
| 2 | A | F | -1.3469 | |
| 3 | E | F | -2.1086 | |
| 4 | F | F | -0.5622 | |
| 5 | R | F | -2.6104 | |
| 6 | H | F | -2.5323 | |
| 7 | D | F | -2.6623 | |
| 8 | S | F | -2.0715 | |
| 9 | G | F | -1.2629 | |
| 10 | Y | F | 0.0025 | |
| 11 | E | F | -0.7088 | |
| 12 | V | F | 0.4771 | |
| 13 | H | F | -1.3967 | |
| 14 | H | F | -2.0432 | |
| 15 | Q | F | -2.6974 | |
| 16 | K | F | -2.4029 | |
| 17 | L | F | -1.0018 | |
| 18 | V | F | -0.3568 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | 0.1927 | |
| 21 | A | F | 0.0000 | |
| 22 | E | F | -2.5458 | |
| 23 | D | F | -2.7728 | |
| 24 | V | F | -1.6636 | |
| 25 | G | F | -1.4768 | |
| 26 | S | F | -0.6851 | |
| 27 | N | F | -0.4719 | |
| 28 | K | F | -0.8809 | |
| 29 | G | F | 0.0000 | |
| 30 | A | F | 0.0000 | |
| 31 | I | F | 0.0000 | |
| 32 | I | F | 0.0000 | |
| 33 | G | F | 0.0000 | |
| 34 | L | F | 0.8105 | |
| 35 | M | F | 0.0000 | |
| 36 | V | F | 0.0000 | |
| 37 | G | F | 0.0000 | |
| 38 | G | F | 0.0000 | |
| 39 | V | F | 0.2523 | |
| 40 | V | F | 0.0000 | |
| 41 | I | F | -0.1773 | |
| 42 | A | F | -0.8622 | |
| 1 | D | G | -1.9594 | |
| 2 | A | G | -1.3960 | |
| 3 | E | G | -1.9820 | |
| 4 | F | G | -0.5558 | |
| 5 | R | G | -2.5019 | |
| 6 | H | G | -2.4763 | |
| 7 | D | G | -2.6778 | |
| 8 | S | G | -2.1917 | |
| 9 | G | G | -1.2941 | |
| 10 | Y | G | -0.3024 | |
| 11 | E | G | -1.0728 | |
| 12 | V | G | 0.0526 | |
| 13 | H | G | -1.4518 | |
| 14 | H | G | -1.9102 | |
| 15 | Q | G | -2.0909 | |
| 16 | K | G | -1.7422 | |
| 17 | L | G | -0.4956 | |
| 18 | V | G | 0.0000 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | 0.1019 | |
| 21 | A | G | 0.0000 | |
| 22 | E | G | -2.3952 | |
| 23 | D | G | -2.8876 | |
| 24 | V | G | -1.8139 | |
| 25 | G | G | -1.5844 | |
| 26 | S | G | -1.1402 | |
| 27 | N | G | -0.6711 | |
| 28 | K | G | -1.0480 | |
| 29 | G | G | 0.0000 | |
| 30 | A | G | 0.0000 | |
| 31 | I | G | 0.0000 | |
| 32 | I | G | 0.0000 | |
| 33 | G | G | 0.0000 | |
| 34 | L | G | 0.6923 | |
| 35 | M | G | 0.0000 | |
| 36 | V | G | 0.0000 | |
| 37 | G | G | 0.0000 | |
| 38 | G | G | 0.0000 | |
| 39 | V | G | 0.4818 | |
| 40 | V | G | 0.3118 | |
| 41 | I | G | 0.5822 | |
| 42 | A | G | 0.1734 | |
| 1 | D | H | -1.9906 | |
| 2 | A | H | -1.4140 | |
| 3 | E | H | -2.0305 | |
| 4 | F | H | -0.5925 | |
| 5 | R | H | -2.5073 | |
| 6 | H | H | -2.4736 | |
| 7 | D | H | -2.7074 | |
| 8 | S | H | -2.3254 | |
| 9 | G | H | -1.5963 | |
| 10 | Y | H | -0.7281 | |
| 11 | E | H | -1.3602 | |
| 12 | V | H | -0.2968 | |
| 13 | H | H | -1.6303 | |
| 14 | H | H | -2.0758 | |
| 15 | Q | H | -2.6002 | |
| 16 | K | H | -1.8648 | |
| 17 | L | H | -0.6830 | |
| 18 | V | H | 0.0000 | |
| 19 | F | H | 0.7781 | |
| 20 | F | H | 0.1777 | |
| 21 | A | H | 0.0000 | |
| 22 | E | H | -2.0020 | |
| 23 | D | H | -2.6543 | |
| 24 | V | H | -1.5570 | |
| 25 | G | H | -1.4810 | |
| 26 | S | H | -0.9461 | |
| 27 | N | H | -0.6017 | |
| 28 | K | H | -0.9557 | |
| 29 | G | H | 0.0000 | |
| 30 | A | H | 0.0000 | |
| 31 | I | H | 0.0000 | |
| 32 | I | H | 0.0000 | |
| 33 | G | H | 0.0000 | |
| 34 | L | H | 0.6902 | |
| 35 | M | H | 0.0000 | |
| 36 | V | H | 0.0000 | |
| 37 | G | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | V | H | 0.0000 | |
| 41 | I | H | -0.1488 | |
| 42 | A | H | -0.1326 | |
| 1 | D | I | -2.0298 | |
| 2 | A | I | -1.3999 | |
| 3 | E | I | -2.0619 | |
| 4 | F | I | -0.5285 | |
| 5 | R | I | -2.5576 | |
| 6 | H | I | -2.5033 | |
| 7 | D | I | -3.1514 | |
| 8 | S | I | -2.0648 | |
| 9 | G | I | -1.5771 | |
| 10 | Y | I | -0.4780 | |
| 11 | E | I | -1.5088 | |
| 12 | V | I | -0.2508 | |
| 13 | H | I | -1.5763 | |
| 14 | H | I | -2.1287 | |
| 15 | Q | I | -2.4504 | |
| 16 | K | I | -1.6472 | |
| 17 | L | I | 0.2862 | |
| 18 | V | I | 1.1446 | |
| 19 | F | I | 1.5310 | |
| 20 | F | I | 1.5899 | |
| 21 | A | I | 0.0000 | |
| 22 | E | I | -2.5761 | |
| 23 | D | I | -3.1358 | |
| 24 | V | I | -1.8701 | |
| 25 | G | I | -1.8802 | |
| 26 | S | I | -1.8410 | |
| 27 | N | I | -1.6981 | |
| 28 | K | I | -2.1372 | |
| 29 | G | I | 0.0000 | |
| 30 | A | I | 0.0000 | |
| 31 | I | I | 0.0000 | |
| 32 | I | I | 0.5249 | |
| 33 | G | I | 0.0000 | |
| 34 | L | I | 0.7547 | |
| 35 | M | I | 0.0000 | |
| 36 | V | I | 0.0000 | |
| 37 | G | I | 0.0000 | |
| 38 | G | I | 0.0000 | |
| 39 | V | I | 0.0000 | |
| 40 | V | I | 0.0000 | |
| 41 | I | I | 0.0540 | |
| 42 | A | I | -0.2478 | |
| 1 | D | J | -2.0239 | |
| 2 | A | J | -1.3994 | |
| 3 | E | J | -2.2929 | |
| 4 | F | J | -0.2275 | |
| 5 | R | J | -2.1904 | |
| 6 | H | J | -1.6984 | |
| 7 | D | J | -0.6911 | |
| 8 | S | J | -0.5395 | |
| 9 | G | J | -0.3071 | |
| 10 | Y | J | -0.0985 | |
| 11 | E | J | -0.9781 | |
| 12 | V | J | 0.2408 | |
| 13 | H | J | -1.4777 | |
| 14 | H | J | -1.9791 | |
| 15 | Q | J | -2.6703 | |
| 16 | K | J | -2.3960 | |
| 17 | L | J | 0.0000 | |
| 18 | V | J | 0.1736 | |
| 19 | F | J | 1.0935 | |
| 20 | F | J | 1.1030 | |
| 21 | A | J | 0.0000 | |
| 22 | E | J | -1.7840 | |
| 23 | D | J | -2.5202 | |
| 24 | V | J | -1.5112 | |
| 25 | G | J | -1.3843 | |
| 26 | S | J | -0.7818 | |
| 27 | N | J | -0.5671 | |
| 28 | K | J | -0.8196 | |
| 29 | G | J | 0.0000 | |
| 30 | A | J | 0.0000 | |
| 31 | I | J | 0.0000 | |
| 32 | I | J | 0.0000 | |
| 33 | G | J | 0.0000 | |
| 34 | L | J | 0.6219 | |
| 35 | M | J | 0.0000 | |
| 36 | V | J | 0.0000 | |
| 37 | G | J | 0.0000 | |
| 38 | G | J | 0.1317 | |
| 39 | V | J | -0.2697 | |
| 40 | V | J | 0.0000 | |
| 41 | I | J | -0.4005 | |
| 42 | A | J | -0.5905 | |
| 1 | G | K | -0.4504 | |
| 2 | Y | K | 0.2012 | |
| 3 | E | K | -1.0597 | |
| 4 | V | K | -0.0879 | |
| 5 | H | K | -1.4085 | |
| 6 | H | K | -2.1183 | |
| 7 | Q | K | -2.4786 | |
| 8 | K | K | -2.7046 | |
| 9 | L | K | -1.0021 | |
| 10 | V | K | -0.3011 | |
| 11 | F | K | 0.9723 | |
| 12 | F | K | 1.7108 | |
| 13 | A | K | -0.1019 | |
| 14 | E | K | -2.1356 | |
| 15 | D | K | -2.9283 | |
| 16 | V | K | 0.0000 | |
| 17 | G | K | 0.0000 | |
| 18 | S | K | -1.8501 | |
| 19 | N | K | -2.2632 | |
| 20 | K | K | -2.8055 | |
| 21 | G | K | -1.5755 | |
| 22 | A | K | 0.0000 | |
| 23 | I | K | -0.4961 | |
| 24 | I | K | 0.0000 | |
| 25 | G | K | 0.2758 | |
| 26 | L | K | 0.2914 | |
| 27 | M | K | 0.0000 | |
| 28 | V | K | 0.0000 | |
| 29 | G | K | 0.0000 | |
| 30 | G | K | 0.5331 | |
| 31 | V | K | 0.5169 | |
| 32 | V | K | 0.3014 | |
| 33 | I | K | 1.1983 | |
| 34 | A | K | 0.7148 | |
| 1 | G | L | -0.1387 | |
| 2 | Y | L | 0.6320 | |
| 3 | E | L | -0.8200 | |
| 4 | V | L | 0.3297 | |
| 5 | H | L | -1.2465 | |
| 6 | H | L | -1.8916 | |
| 7 | Q | L | -2.2449 | |
| 8 | K | L | -1.7089 | |
| 9 | L | L | -0.1555 | |
| 10 | V | L | 0.8419 | |
| 11 | F | L | 1.1690 | |
| 12 | F | L | 1.3111 | |
| 13 | A | L | 0.0000 | |
| 14 | E | L | -2.3545 | |
| 15 | D | L | -3.1648 | |
| 16 | V | L | -2.1478 | |
| 17 | G | L | -1.9219 | |
| 18 | S | L | -1.8648 | |
| 19 | N | L | -1.8528 | |
| 20 | K | L | -2.2272 | |
| 21 | G | L | 0.0000 | |
| 22 | A | L | 0.0000 | |
| 23 | I | L | 0.0000 | |
| 24 | I | L | 0.0000 | |
| 25 | G | L | 0.0000 | |
| 26 | L | L | 0.4599 | |
| 27 | M | L | 0.0000 | |
| 28 | V | L | 0.0000 | |
| 29 | G | L | 0.0000 | |
| 30 | G | L | 0.0000 | |
| 31 | V | L | 0.4358 | |
| 32 | V | L | 0.0904 | |
| 33 | I | L | -0.0431 | |
| 34 | A | L | -0.4497 |