Project name: 44a

Status: done

Started: 2026-05-26 16:14:38
Settings
Chain sequence(s) A: MRWQEMGYIFYPRKLR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-1.8085
Maximal score value
3.7141
Average score
0.3685
Total score value
5.8959

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2244
2 R A -1.3454
3 W A 0.0493
4 Q A -1.1746
5 E A -0.8460
6 M A 1.2113
7 G A 1.5870
8 Y A 2.4551
9 I A 3.2536
10 F A 3.7141
11 Y A 2.3422
12 P A 0.3758
13 R A -1.6947
14 K A -1.6991
15 L A -0.7486
16 R A -1.8085
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Laboratory of Theory of Biopolymers 2018