Project name: a3cc05cb83408fa

Status: done

Started: 2025-06-23 12:11:07
Settings
Chain sequence(s) A: KTHLRDMIILPEMVGSMVGVYNGKTFNQVELKPEMIGHYLGEFSITYKPVKHGRPARDRCHPLLPIHPPQVA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-3.6938
Maximal score value
2.2742
Average score
-0.6154
Total score value
-44.3105

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.6720
2 T A -0.7883
3 H A -0.9414
4 L A 0.1734
5 R A -0.7854
6 D A -1.4246
7 M A 0.2281
8 I A 1.2636
9 I A 0.0000
10 L A 0.6338
11 P A -0.6752
12 E A -1.4737
13 M A -0.4518
14 V A -0.7321
15 G A -1.0593
16 S A -0.6081
17 M A -0.5970
18 V A -0.7542
19 G A 0.0000
20 V A 0.0000
21 Y A -0.5525
22 N A -0.1305
23 G A -0.7635
24 K A -1.7875
25 T A -0.8685
26 F A -0.7080
27 N A -0.7273
28 Q A -1.5356
29 V A -1.1067
30 E A -1.8176
31 L A 0.0000
32 K A -1.8377
33 P A -1.3992
34 E A -1.9957
35 M A -0.8433
36 I A 0.1998
37 G A 0.1357
38 H A -0.3647
39 Y A 0.2046
40 L A 0.0000
41 G A -0.5610
42 E A -1.2800
43 F A -0.1547
44 S A 0.0000
45 I A 1.6556
46 T A 0.6560
47 Y A 1.1729
48 K A -0.5774
49 P A -0.2207
50 V A 0.2364
51 K A -1.8984
52 H A -2.0543
53 G A -2.1058
54 R A -2.8435
55 P A -2.5138
56 A A -2.5272
57 R A -3.6610
58 D A -3.6938
59 R A -3.4863
60 C A -1.5375
61 H A -1.0935
62 P A 0.0962
63 L A 2.0991
64 L A 2.2742
65 P A 1.4138
66 I A 1.9207
67 H A -0.2399
68 P A -0.4023
69 P A -0.4461
70 Q A -0.6624
71 V A 1.1113
72 A A 0.5753
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018