| Chain sequence(s) |
A: MSGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLEENEAGD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:36)
[INFO] Main: Simulation completed successfully. (00:05:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6031 | |
| 2 | S | A | -0.6581 | |
| 3 | G | A | -1.9937 | |
| 4 | E | A | -3.5895 | |
| 5 | D | A | -4.2671 | |
| 6 | E | A | -4.5079 | |
| 7 | Q | A | -4.1263 | |
| 8 | Q | A | -3.6489 | |
| 9 | E | A | -3.5879 | |
| 10 | Q | A | -2.4306 | |
| 11 | T | A | -1.5522 | |
| 12 | I | A | 0.0000 | |
| 13 | A | A | -0.7264 | |
| 14 | E | A | -1.5008 | |
| 15 | D | A | -1.5182 | |
| 16 | L | A | 0.0632 | |
| 17 | V | A | 0.0000 | |
| 18 | V | A | -0.4434 | |
| 19 | T | A | -0.3069 | |
| 20 | K | A | 0.0000 | |
| 21 | Y | A | 0.0000 | |
| 22 | K | A | -1.1202 | |
| 23 | M | A | -0.7523 | |
| 24 | G | A | 0.0000 | |
| 25 | G | A | 0.0000 | |
| 26 | D | A | -2.4119 | |
| 27 | I | A | 0.0000 | |
| 28 | A | A | 0.0000 | |
| 29 | N | A | -1.7150 | |
| 30 | R | A | -2.3586 | |
| 31 | V | A | 0.0000 | |
| 32 | L | A | 0.0000 | |
| 33 | R | A | -1.7117 | |
| 34 | S | A | -1.4174 | |
| 35 | L | A | 0.0000 | |
| 36 | V | A | -1.0724 | |
| 37 | E | A | -1.9160 | |
| 38 | A | A | -0.9486 | |
| 39 | S | A | 0.0000 | |
| 40 | S | A | -1.3528 | |
| 41 | S | A | -1.6018 | |
| 42 | G | A | -0.5976 | |
| 43 | V | A | 0.2877 | |
| 44 | S | A | 0.2785 | |
| 45 | V | A | 0.0000 | |
| 46 | L | A | -0.6849 | |
| 47 | S | A | -0.7558 | |
| 48 | L | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | E | A | -1.3913 | |
| 51 | K | A | -1.3189 | |
| 52 | G | A | 0.0000 | |
| 53 | D | A | 0.0000 | |
| 54 | A | A | -0.5813 | |
| 55 | M | A | -0.7210 | |
| 56 | I | A | 0.0000 | |
| 57 | M | A | -0.0982 | |
| 58 | E | A | -1.7543 | |
| 59 | E | A | -1.6614 | |
| 60 | T | A | 0.0000 | |
| 61 | G | A | -1.6709 | |
| 62 | K | A | -2.3207 | |
| 63 | I | A | -1.5095 | |
| 64 | F | A | -2.0278 | |
| 65 | K | A | -3.4584 | |
| 66 | K | A | -3.3538 | |
| 67 | E | A | -3.2028 | |
| 68 | K | A | -3.7436 | |
| 69 | E | A | -3.3528 | |
| 70 | M | A | -2.3078 | |
| 71 | K | A | -1.9450 | |
| 72 | K | A | -0.7884 | |
| 73 | G | A | 0.0000 | |
| 74 | I | A | 0.3245 | |
| 75 | A | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | P | A | 0.0000 | |
| 78 | T | A | 0.0000 | |
| 79 | S | A | 0.0000 | |
| 80 | I | A | 0.0000 | |
| 81 | S | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | N | A | -0.8353 | |
| 84 | N | A | -1.1616 | |
| 85 | C | A | 0.0000 | |
| 86 | V | A | 0.0000 | |
| 87 | C | A | 0.0000 | |
| 88 | H | A | -0.1640 | |
| 89 | F | A | 0.0000 | |
| 90 | S | A | 0.0000 | |
| 91 | P | A | 0.0000 | |
| 92 | L | A | 0.0000 | |
| 93 | K | A | -2.3547 | |
| 94 | S | A | -1.8891 | |
| 95 | D | A | -1.8683 | |
| 96 | Q | A | -1.9247 | |
| 97 | D | A | -1.0783 | |
| 98 | Y | A | 0.2157 | |
| 99 | I | A | 0.5908 | |
| 100 | L | A | 0.0000 | |
| 101 | K | A | -2.4336 | |
| 102 | E | A | -3.1573 | |
| 103 | G | A | -1.8311 | |
| 104 | D | A | 0.0000 | |
| 105 | L | A | 0.0000 | |
| 106 | V | A | 0.0000 | |
| 107 | K | A | 0.0000 | |
| 108 | I | A | 0.0000 | |
| 109 | D | A | 0.0000 | |
| 110 | L | A | 0.0000 | |
| 111 | G | A | 0.0000 | |
| 112 | V | A | 0.0000 | |
| 113 | H | A | 0.0000 | |
| 114 | V | A | 0.0000 | |
| 115 | D | A | -0.9688 | |
| 116 | G | A | 0.0000 | |
| 117 | F | A | 0.0000 | |
| 118 | I | A | 0.0000 | |
| 119 | A | A | 0.0000 | |
| 120 | N | A | 0.0000 | |
| 121 | V | A | 0.0000 | |
| 122 | A | A | 0.0000 | |
| 123 | H | A | 0.0000 | |
| 124 | T | A | 0.0000 | |
| 125 | F | A | 0.0000 | |
| 126 | V | A | 0.0000 | |
| 127 | V | A | 0.0000 | |
| 128 | D | A | -2.4598 | |
| 129 | V | A | -1.2596 | |
| 130 | A | A | -1.0736 | |
| 131 | Q | A | -1.6150 | |
| 132 | G | A | -1.1240 | |
| 133 | T | A | -1.2199 | |
| 134 | Q | A | -1.6397 | |
| 135 | V | A | 0.0000 | |
| 136 | T | A | -1.5271 | |
| 137 | G | A | -1.4836 | |
| 138 | R | A | -1.5599 | |
| 139 | K | A | -1.0941 | |
| 140 | A | A | 0.0000 | |
| 141 | D | A | 0.0000 | |
| 142 | V | A | 0.0000 | |
| 143 | I | A | 0.0000 | |
| 144 | K | A | -0.8793 | |
| 145 | A | A | 0.0000 | |
| 146 | A | A | 0.0000 | |
| 147 | H | A | -0.2090 | |
| 148 | L | A | -0.1817 | |
| 149 | C | A | 0.0000 | |
| 150 | A | A | 0.0000 | |
| 151 | E | A | -0.2639 | |
| 152 | A | A | 0.0000 | |
| 153 | A | A | 0.0000 | |
| 154 | L | A | -0.1379 | |
| 155 | R | A | -0.3583 | |
| 156 | L | A | -0.3444 | |
| 157 | V | A | 0.0000 | |
| 158 | K | A | -1.3628 | |
| 159 | P | A | -1.6543 | |
| 160 | G | A | -1.5610 | |
| 161 | N | A | -1.5904 | |
| 162 | Q | A | -1.9794 | |
| 163 | N | A | 0.0000 | |
| 164 | T | A | -1.8642 | |
| 165 | Q | A | -1.2027 | |
| 166 | V | A | 0.0000 | |
| 167 | T | A | 0.0000 | |
| 168 | E | A | -2.4675 | |
| 169 | A | A | 0.0000 | |
| 170 | W | A | 0.0000 | |
| 171 | N | A | -1.8514 | |
| 172 | K | A | -2.5379 | |
| 173 | V | A | 0.0000 | |
| 174 | A | A | 0.0000 | |
| 175 | H | A | -2.3319 | |
| 176 | S | A | -2.0496 | |
| 177 | F | A | 0.0000 | |
| 178 | N | A | -1.9157 | |
| 179 | C | A | 0.0000 | |
| 180 | T | A | -1.4967 | |
| 181 | P | A | 0.0000 | |
| 182 | I | A | 0.0000 | |
| 183 | E | A | -0.8614 | |
| 184 | G | A | -0.4514 | |
| 185 | M | A | 0.2872 | |
| 186 | L | A | 0.3553 | |
| 187 | S | A | 0.0000 | |
| 188 | H | A | -0.8716 | |
| 189 | Q | A | 0.0000 | |
| 190 | L | A | 0.0000 | |
| 191 | K | A | -1.6951 | |
| 192 | Q | A | -1.2905 | |
| 193 | H | A | -0.6877 | |
| 194 | V | A | -0.4675 | |
| 195 | I | A | -0.6329 | |
| 196 | D | A | -1.4907 | |
| 197 | G | A | 0.0000 | |
| 198 | E | A | -2.5150 | |
| 199 | K | A | -2.2643 | |
| 200 | T | A | -1.4895 | |
| 201 | I | A | 0.0000 | |
| 202 | I | A | 0.0000 | |
| 203 | Q | A | 0.0000 | |
| 204 | N | A | -1.2447 | |
| 205 | P | A | -1.8823 | |
| 206 | T | A | -2.4203 | |
| 207 | D | A | -3.7324 | |
| 208 | Q | A | -3.8036 | |
| 209 | Q | A | -3.8384 | |
| 210 | K | A | -4.8235 | |
| 211 | K | A | -4.8616 | |
| 212 | D | A | -4.5196 | |
| 213 | H | A | -3.7155 | |
| 214 | E | A | -4.2463 | |
| 215 | K | A | -3.7337 | |
| 216 | A | A | -2.8711 | |
| 217 | E | A | -3.2188 | |
| 218 | F | A | 0.0000 | |
| 219 | E | A | -2.2660 | |
| 220 | V | A | -0.5430 | |
| 221 | H | A | -0.6018 | |
| 222 | E | A | -0.8313 | |
| 223 | V | A | 0.0000 | |
| 224 | Y | A | 0.0000 | |
| 225 | A | A | 0.0000 | |
| 226 | V | A | 0.0000 | |
| 227 | D | A | -0.1378 | |
| 228 | V | A | 0.0000 | |
| 229 | L | A | 0.0000 | |
| 230 | V | A | 0.0000 | |
| 231 | S | A | 0.0000 | |
| 232 | S | A | 0.0000 | |
| 233 | G | A | -2.0493 | |
| 234 | E | A | -2.6561 | |
| 235 | G | A | 0.0000 | |
| 236 | K | A | -2.3440 | |
| 237 | A | A | -2.1038 | |
| 238 | K | A | -3.0122 | |
| 239 | D | A | -2.9618 | |
| 240 | A | A | -1.9209 | |
| 241 | G | A | -1.7724 | |
| 242 | Q | A | -1.9084 | |
| 243 | R | A | -2.3606 | |
| 244 | T | A | -1.3033 | |
| 245 | T | A | 0.0000 | |
| 246 | I | A | 0.0000 | |
| 247 | Y | A | 0.0000 | |
| 248 | K | A | 0.0000 | |
| 249 | R | A | -1.3786 | |
| 250 | D | A | -1.7802 | |
| 251 | P | A | -1.2597 | |
| 252 | S | A | -1.3537 | |
| 253 | K | A | -2.1624 | |
| 254 | Q | A | -2.0327 | |
| 255 | Y | A | -1.2513 | |
| 256 | G | A | -1.1518 | |
| 257 | L | A | 0.0000 | |
| 258 | K | A | -2.2147 | |
| 259 | M | A | -1.5377 | |
| 260 | K | A | -2.2835 | |
| 261 | T | A | -1.7470 | |
| 262 | S | A | 0.0000 | |
| 263 | R | A | -2.0454 | |
| 264 | A | A | -1.2123 | |
| 265 | F | A | 0.0000 | |
| 266 | F | A | -1.0555 | |
| 267 | S | A | -1.5248 | |
| 268 | E | A | -1.8600 | |
| 269 | V | A | 0.0000 | |
| 270 | E | A | -2.4858 | |
| 271 | R | A | -3.0137 | |
| 272 | R | A | -2.1850 | |
| 273 | F | A | -1.3893 | |
| 274 | D | A | -1.8700 | |
| 275 | A | A | 0.0000 | |
| 276 | M | A | 0.0000 | |
| 277 | P | A | 0.0000 | |
| 278 | F | A | 0.0000 | |
| 279 | T | A | 0.0000 | |
| 280 | L | A | 0.0000 | |
| 281 | R | A | 0.0000 | |
| 282 | A | A | -0.8608 | |
| 283 | F | A | 0.0000 | |
| 284 | E | A | -2.9242 | |
| 285 | D | A | -3.4777 | |
| 286 | E | A | -4.0620 | |
| 287 | K | A | -4.0574 | |
| 288 | K | A | -3.7891 | |
| 289 | A | A | 0.0000 | |
| 290 | R | A | -2.8778 | |
| 291 | M | A | -1.4388 | |
| 292 | G | A | 0.0000 | |
| 293 | V | A | 0.0000 | |
| 294 | V | A | -0.0007 | |
| 295 | E | A | -1.1005 | |
| 296 | C | A | 0.0000 | |
| 297 | A | A | -1.7476 | |
| 298 | K | A | -2.4128 | |
| 299 | H | A | -2.4546 | |
| 300 | E | A | -3.3318 | |
| 301 | L | A | 0.0000 | |
| 302 | L | A | 0.0000 | |
| 303 | Q | A | -2.0702 | |
| 304 | P | A | -0.9434 | |
| 305 | F | A | -0.4503 | |
| 306 | N | A | -1.5672 | |
| 307 | V | A | 0.0000 | |
| 308 | L | A | -1.3220 | |
| 309 | Y | A | -1.8052 | |
| 310 | E | A | 0.0000 | |
| 311 | K | A | -3.3961 | |
| 312 | E | A | -2.9732 | |
| 313 | G | A | -1.9659 | |
| 314 | E | A | -1.9971 | |
| 315 | F | A | -0.8565 | |
| 316 | V | A | 0.0000 | |
| 317 | A | A | 0.0000 | |
| 318 | Q | A | 0.0000 | |
| 319 | F | A | 0.0000 | |
| 320 | K | A | -0.2909 | |
| 321 | F | A | 0.0000 | |
| 322 | T | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | L | A | 0.0000 | |
| 325 | L | A | 0.0000 | |
| 326 | M | A | -0.4301 | |
| 327 | P | A | -0.9901 | |
| 328 | N | A | -2.1268 | |
| 329 | G | A | -1.5545 | |
| 330 | P | A | -0.6348 | |
| 331 | M | A | -0.1539 | |
| 332 | R | A | -0.4199 | |
| 333 | I | A | -0.5641 | |
| 334 | T | A | 0.0000 | |
| 335 | S | A | -0.6802 | |
| 336 | G | A | -0.6752 | |
| 337 | P | A | -0.8243 | |
| 338 | F | A | -0.8956 | |
| 339 | E | A | -2.2277 | |
| 340 | P | A | -2.0317 | |
| 341 | D | A | -2.7165 | |
| 342 | L | A | -1.9356 | |
| 343 | Y | A | 0.0000 | |
| 344 | K | A | -2.8728 | |
| 345 | S | A | -2.4336 | |
| 346 | E | A | -2.6665 | |
| 347 | M | A | -2.2420 | |
| 348 | E | A | -2.7130 | |
| 349 | V | A | 0.0000 | |
| 350 | Q | A | -2.5299 | |
| 351 | D | A | -2.1458 | |
| 352 | A | A | -1.5468 | |
| 353 | E | A | -2.3366 | |
| 354 | L | A | 0.0000 | |
| 355 | K | A | -2.1012 | |
| 356 | A | A | -1.2868 | |
| 357 | L | A | -0.9100 | |
| 358 | L | A | -0.8561 | |
| 359 | Q | A | -1.5019 | |
| 360 | S | A | -0.9340 | |
| 361 | S | A | -1.4393 | |
| 362 | A | A | -1.0633 | |
| 363 | S | A | -2.1675 | |
| 364 | R | A | -4.1822 | |
| 365 | K | A | -4.2414 | |
| 366 | T | A | -3.7013 | |
| 367 | Q | A | -4.6206 | |
| 368 | K | A | -5.5559 | |
| 369 | K | A | -5.5392 | |
| 370 | K | A | -5.3335 | |
| 371 | K | A | -5.1910 | |
| 372 | K | A | -5.3060 | |
| 373 | K | A | -5.0152 | |
| 374 | A | A | -3.6052 | |
| 375 | S | A | -3.3045 | |
| 376 | K | A | -4.1114 | |
| 377 | T | A | -2.7223 | |
| 378 | A | A | -2.2559 | |
| 379 | E | A | -3.3444 | |
| 380 | N | A | -3.0858 | |
| 381 | A | A | -1.8597 | |
| 382 | T | A | -1.7056 | |
| 383 | S | A | -1.8876 | |
| 384 | G | A | -1.7663 | |
| 385 | E | A | -2.1647 | |
| 386 | T | A | -1.1321 | |
| 387 | L | A | -0.5050 | |
| 388 | E | A | -2.4835 | |
| 389 | E | A | -3.4853 | |
| 390 | N | A | -3.3519 | |
| 391 | E | A | -2.9975 | |
| 392 | A | A | -2.0243 | |
| 393 | G | A | -1.8841 | |
| 394 | D | A | -1.9989 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine