| Chain sequence(s) |
H: EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRVSLVTYYYYYYGMDVWGQGTTVTVSS
L: NIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTSSFTFGPGTKVDIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:33)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0685 | |
| 2 | V | H | -1.1655 | |
| 3 | Q | H | -1.2996 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7976 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4330 | |
| 8 | G | H | -0.6694 | |
| 9 | G | H | -0.3545 | |
| 11 | G | H | 0.3233 | |
| 12 | L | H | 1.1830 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.2343 | |
| 15 | P | H | -1.6601 | |
| 16 | G | H | -2.0483 | |
| 17 | R | H | -2.3415 | |
| 18 | S | H | -1.6088 | |
| 19 | L | H | -1.0307 | |
| 20 | R | H | -1.6896 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2728 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | 0.0173 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8270 | |
| 27 | G | H | -1.1969 | |
| 28 | F | H | -0.6234 | |
| 29 | T | H | -0.5876 | |
| 30 | F | H | 0.0000 | |
| 35 | G | H | -1.6233 | |
| 36 | D | H | -2.0048 | |
| 37 | Y | H | -0.6491 | |
| 38 | A | H | -0.4884 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8048 | |
| 45 | A | H | -1.2030 | |
| 46 | P | H | -0.9603 | |
| 47 | G | H | -1.4578 | |
| 48 | K | H | -2.2262 | |
| 49 | G | H | -1.3695 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9061 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | F | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -1.2048 | |
| 58 | S | H | 0.0000 | |
| 59 | K | H | -2.1476 | |
| 60 | A | H | -0.8504 | |
| 61 | Y | H | -0.0562 | |
| 62 | G | H | -0.7302 | |
| 63 | G | H | -1.1143 | |
| 64 | T | H | -0.6571 | |
| 65 | T | H | -0.4942 | |
| 66 | E | H | -0.7608 | |
| 67 | Y | H | -0.7719 | |
| 68 | A | H | -0.6798 | |
| 69 | A | H | -0.7235 | |
| 70 | S | H | -0.7242 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.0794 | |
| 74 | G | H | -1.5597 | |
| 75 | R | H | -1.4389 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9416 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4711 | |
| 80 | R | H | -1.0968 | |
| 81 | D | H | -1.3174 | |
| 82 | D | H | -1.9950 | |
| 83 | S | H | -1.4813 | |
| 84 | K | H | -2.1100 | |
| 85 | S | H | -1.2510 | |
| 86 | I | H | -0.5018 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4531 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1548 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.7791 | |
| 93 | S | H | -1.7665 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.8863 | |
| 96 | T | H | -1.9760 | |
| 97 | E | H | -2.4208 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7901 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.1346 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | -0.1572 | |
| 107 | V | H | 0.0000 | |
| 108 | S | H | 0.7436 | |
| 109 | L | H | 2.3535 | |
| 110 | V | H | 2.1299 | |
| 111 | T | H | 1.6322 | |
| 111A | Y | H | 2.5117 | |
| 111B | Y | H | 3.0254 | |
| 112B | Y | H | 2.8863 | |
| 112A | Y | H | 2.5080 | |
| 112 | Y | H | 0.0000 | |
| 113 | Y | H | 1.0704 | |
| 114 | G | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.2732 | |
| 117 | V | H | -0.1593 | |
| 118 | W | H | -0.4176 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3608 | |
| 121 | G | H | -0.6097 | |
| 122 | T | H | -0.2003 | |
| 123 | T | H | 0.0783 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0775 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6332 | |
| 128 | S | H | -0.3627 | |
| 1 | N | L | -1.7332 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.0266 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.2584 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7897 | |
| 8 | P | L | -0.5354 | |
| 9 | S | L | -0.7276 | |
| 10 | S | L | -0.8844 | |
| 11 | L | L | -0.4461 | |
| 12 | S | L | -0.5080 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | 0.0530 | |
| 15 | V | L | 0.7474 | |
| 16 | G | L | -0.4692 | |
| 17 | D | L | -1.2785 | |
| 18 | R | L | -2.1402 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5818 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7683 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5992 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.7134 | |
| 27 | Q | L | -1.6140 | |
| 28 | S | L | -0.8809 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.2804 | |
| 37 | S | L | -0.0887 | |
| 38 | Y | L | 0.4884 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8597 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7867 | |
| 46 | P | L | -1.2694 | |
| 47 | G | L | -1.6974 | |
| 48 | K | L | -2.5580 | |
| 49 | A | L | -1.5057 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1703 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0000 | |
| 56 | A | L | 0.1779 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.2894 | |
| 66 | S | L | 0.0250 | |
| 67 | L | L | 0.2930 | |
| 68 | Q | L | -0.2021 | |
| 69 | S | L | -0.3616 | |
| 70 | G | L | -0.4909 | |
| 71 | V | L | -0.2764 | |
| 72 | P | L | -0.3280 | |
| 74 | S | L | -0.4036 | |
| 75 | R | L | -0.8070 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3501 | |
| 78 | G | L | -0.2810 | |
| 79 | S | L | -0.5697 | |
| 80 | G | L | -0.9033 | |
| 83 | S | L | -0.8750 | |
| 84 | G | L | -0.9759 | |
| 85 | T | L | -1.4566 | |
| 86 | D | L | -1.7662 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6561 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6123 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3359 | |
| 93 | S | L | -1.0590 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6451 | |
| 96 | P | L | -0.4750 | |
| 97 | E | L | -1.4827 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2920 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8743 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.0000 | |
| 108 | Y | L | 0.9027 | |
| 109 | S | L | 0.0701 | |
| 113 | T | L | -0.0129 | |
| 114 | S | L | -0.3766 | |
| 115 | S | L | -0.3491 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | -0.5222 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | P | L | -0.9458 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4930 | |
| 124 | V | L | 0.0000 | |
| 125 | D | L | -0.1280 | |
| 126 | I | L | 1.1742 | |
| 127 | K | L | -0.6711 |