Project name: a3f394a4f803b29

Status: done

Started: 2026-02-13 05:24:15
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRVSLVTYYYYYYGMDVWGQGTTVTVSS
L: NIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTSSFTFGPGTKVDIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:35)
Show buried residues

Minimal score value
-2.8863
Maximal score value
3.0254
Average score
-0.4639
Total score value
-108.5543

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0685
2 V H -1.1655
3 Q H -1.2996
4 L H 0.0000
5 V H 0.7976
6 E H 0.0000
7 S H -0.4330
8 G H -0.6694
9 G H -0.3545
11 G H 0.3233
12 L H 1.1830
13 V H 0.0000
14 Q H -1.2343
15 P H -1.6601
16 G H -2.0483
17 R H -2.3415
18 S H -1.6088
19 L H -1.0307
20 R H -1.6896
21 L H 0.0000
22 S H -0.2728
23 C H 0.0000
24 T H 0.0173
25 A H 0.0000
26 S H -0.8270
27 G H -1.1969
28 F H -0.6234
29 T H -0.5876
30 F H 0.0000
35 G H -1.6233
36 D H -2.0048
37 Y H -0.6491
38 A H -0.4884
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.8048
45 A H -1.2030
46 P H -0.9603
47 G H -1.4578
48 K H -2.2262
49 G H -1.3695
50 L H 0.0000
51 E H -0.9061
52 W H 0.0000
53 V H 0.0000
54 G H 0.0000
55 F H 0.0000
56 I H 0.0000
57 R H -1.2048
58 S H 0.0000
59 K H -2.1476
60 A H -0.8504
61 Y H -0.0562
62 G H -0.7302
63 G H -1.1143
64 T H -0.6571
65 T H -0.4942
66 E H -0.7608
67 Y H -0.7719
68 A H -0.6798
69 A H -0.7235
70 S H -0.7242
71 V H 0.0000
72 K H -2.0794
74 G H -1.5597
75 R H -1.4389
76 F H 0.0000
77 T H -0.9416
78 I H 0.0000
79 S H -0.4711
80 R H -1.0968
81 D H -1.3174
82 D H -1.9950
83 S H -1.4813
84 K H -2.1100
85 S H -1.2510
86 I H -0.5018
87 A H 0.0000
88 Y H -0.4531
89 L H 0.0000
90 Q H -1.1548
91 M H 0.0000
92 N H -1.7791
93 S H -1.7665
94 L H 0.0000
95 K H -2.8863
96 T H -1.9760
97 E H -2.4208
98 D H 0.0000
99 T H -0.7901
100 A H 0.0000
101 V H 0.1346
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 T H 0.0000
106 R H -0.1572
107 V H 0.0000
108 S H 0.7436
109 L H 2.3535
110 V H 2.1299
111 T H 1.6322
111A Y H 2.5117
111B Y H 3.0254
112B Y H 2.8863
112A Y H 2.5080
112 Y H 0.0000
113 Y H 1.0704
114 G H 0.0000
115 M H 0.0000
116 D H -0.2732
117 V H -0.1593
118 W H -0.4176
119 G H 0.0000
120 Q H -1.3608
121 G H -0.6097
122 T H -0.2003
123 T H 0.0783
124 V H 0.0000
125 T H -0.0775
126 V H 0.0000
127 S H -0.6332
128 S H -0.3627
1 N L -1.7332
2 I L 0.0000
3 Q L -2.0266
4 M L 0.0000
5 T L -1.2584
6 Q L 0.0000
7 S L -0.7897
8 P L -0.5354
9 S L -0.7276
10 S L -0.8844
11 L L -0.4461
12 S L -0.5080
13 A L 0.0000
14 S L 0.0530
15 V L 0.7474
16 G L -0.4692
17 D L -1.2785
18 R L -2.1402
19 V L 0.0000
20 T L -0.5818
21 I L 0.0000
22 T L -0.7683
23 C L 0.0000
24 R L -2.5992
25 A L 0.0000
26 S L -1.7134
27 Q L -1.6140
28 S L -0.8809
29 I L 0.0000
36 S L -0.2804
37 S L -0.0887
38 Y L 0.4884
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8597
44 Q L 0.0000
45 K L -1.7867
46 P L -1.2694
47 G L -1.6974
48 K L -2.5580
49 A L -1.5057
50 P L 0.0000
51 K L -1.1703
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0000
56 A L 0.1779
57 A L 0.0000
65 S L -0.2894
66 S L 0.0250
67 L L 0.2930
68 Q L -0.2021
69 S L -0.3616
70 G L -0.4909
71 V L -0.2764
72 P L -0.3280
74 S L -0.4036
75 R L -0.8070
76 F L 0.0000
77 S L -0.3501
78 G L -0.2810
79 S L -0.5697
80 G L -0.9033
83 S L -0.8750
84 G L -0.9759
85 T L -1.4566
86 D L -1.7662
87 F L 0.0000
88 T L -0.6561
89 L L 0.0000
90 T L -0.6123
91 I L 0.0000
92 S L -1.3359
93 S L -1.0590
94 L L 0.0000
95 Q L -0.6451
96 P L -0.4750
97 E L -1.4827
98 D L 0.0000
99 F L -0.2920
100 A L 0.0000
101 T L -0.8743
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 Y L 0.9027
109 S L 0.0701
113 T L -0.0129
114 S L -0.3766
115 S L -0.3491
116 F L 0.0000
117 T L -0.5222
118 F L 0.0000
119 G L 0.0000
120 P L -0.9458
121 G L 0.0000
122 T L 0.0000
123 K L -1.4930
124 V L 0.0000
125 D L -0.1280
126 I L 1.1742
127 K L -0.6711
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Laboratory of Theory of Biopolymers 2018