| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGYVFTDYGMNWVRQAPGKGLEWMGWINTYIGEPIYADSVKGRFTFSLDTSKSTAYLQMNSLRAEDTAVYYCARGYRSYAMDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCKASQNVGTNVAWYQQKPGKAPKALIYSASFLYSGVPYRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNIYPLTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1768 | |
| 2 | V | H | -1.1338 | |
| 3 | Q | H | -1.3098 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1230 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1995 | |
| 8 | G | H | -0.5722 | |
| 9 | G | H | 0.1179 | |
| 11 | G | H | 0.8099 | |
| 12 | L | H | 1.3608 | |
| 13 | V | H | -0.0604 | |
| 14 | Q | H | -1.3302 | |
| 15 | P | H | -1.5992 | |
| 16 | G | H | -1.3535 | |
| 17 | G | H | -1.1444 | |
| 18 | S | H | -1.1971 | |
| 19 | L | H | -0.9364 | |
| 20 | R | H | -1.9767 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2230 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0832 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6421 | |
| 27 | G | H | -0.9391 | |
| 28 | Y | H | 0.0926 | |
| 29 | V | H | 1.2687 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | 0.4806 | |
| 36 | D | H | -0.7399 | |
| 37 | Y | H | -0.1120 | |
| 38 | G | H | -0.1306 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6259 | |
| 45 | A | H | -1.0082 | |
| 46 | P | H | -0.8198 | |
| 47 | G | H | -1.4784 | |
| 48 | K | H | -2.3449 | |
| 49 | G | H | -1.5831 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9813 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | 0.1018 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | 0.2433 | |
| 58 | T | H | 0.0000 | |
| 59 | Y | H | 1.6620 | |
| 62 | I | H | 2.1168 | |
| 63 | G | H | 0.5207 | |
| 64 | E | H | -0.3677 | |
| 65 | P | H | -0.1919 | |
| 66 | I | H | -0.1124 | |
| 67 | Y | H | -0.5741 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.6559 | |
| 70 | S | H | -1.6885 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6678 | |
| 74 | G | H | -1.8334 | |
| 75 | R | H | -1.6163 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7921 | |
| 78 | F | H | 0.0000 | |
| 79 | S | H | -0.1657 | |
| 80 | L | H | -0.0740 | |
| 81 | D | H | -0.8346 | |
| 82 | T | H | -0.4864 | |
| 83 | S | H | -1.1454 | |
| 84 | K | H | -1.9370 | |
| 85 | S | H | -0.7507 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.1685 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0938 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3096 | |
| 93 | S | H | -1.1966 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3692 | |
| 96 | A | H | -1.7254 | |
| 97 | E | H | -2.2538 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3833 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7060 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | -0.1263 | |
| 108 | Y | H | -0.2983 | |
| 109 | R | H | -1.4770 | |
| 110 | S | H | -0.7682 | |
| 113 | Y | H | -0.2616 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.0505 | |
| 117 | Y | H | 0.0716 | |
| 118 | W | H | -0.2541 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2603 | |
| 121 | G | H | -0.3101 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.6540 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3295 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5509 | |
| 128 | S | H | -0.5606 | |
| 1 | D | L | -2.0837 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2561 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3555 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6575 | |
| 8 | P | L | -0.6053 | |
| 9 | S | L | -1.0079 | |
| 10 | S | L | -1.1836 | |
| 11 | L | L | -0.8677 | |
| 12 | S | L | -0.9453 | |
| 13 | A | L | -0.9251 | |
| 14 | S | L | -0.8427 | |
| 15 | V | L | -0.0946 | |
| 16 | G | L | -0.7055 | |
| 17 | D | L | -1.8019 | |
| 18 | R | L | -2.2771 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6353 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8242 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.6181 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1430 | |
| 27 | Q | L | -2.6436 | |
| 28 | N | L | -2.3968 | |
| 29 | V | L | 0.0000 | |
| 36 | G | L | -1.3641 | |
| 37 | T | L | -0.7523 | |
| 38 | N | L | -0.6895 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5934 | |
| 46 | P | L | -1.1562 | |
| 47 | G | L | -1.6455 | |
| 48 | K | L | -2.5588 | |
| 49 | A | L | -1.5258 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1646 | |
| 52 | A | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.7745 | |
| 56 | S | L | 0.2113 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.7201 | |
| 66 | F | L | 2.1030 | |
| 67 | L | L | 1.5065 | |
| 68 | Y | L | 0.7316 | |
| 69 | S | L | -0.0392 | |
| 70 | G | L | -0.3083 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | 0.3616 | |
| 74 | Y | L | 1.1074 | |
| 75 | R | L | -0.0263 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | 0.3232 | |
| 78 | G | L | 0.1668 | |
| 79 | S | L | -0.4385 | |
| 80 | G | L | -1.1454 | |
| 83 | S | L | -1.3778 | |
| 84 | G | L | -1.7516 | |
| 85 | T | L | -2.1702 | |
| 86 | D | L | -2.6210 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7790 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6124 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.0936 | |
| 93 | S | L | -1.0262 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7170 | |
| 96 | P | L | -0.9668 | |
| 97 | E | L | -1.6596 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.1773 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.9808 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | N | L | -0.3749 | |
| 109 | I | L | 0.5401 | |
| 114 | Y | L | 0.6159 | |
| 115 | P | L | -0.1807 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.6372 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7550 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.0104 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.2513 | |
| 126 | I | L | -0.6556 | |
| 127 | K | L | -1.5608 |