| Chain sequence(s) |
B: SSPLAEELDRRRNAALSAQLSAALQASQEDMTLAWRVDGERVALARVVRL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.5165 | |
| 2 | S | B | -0.3481 | |
| 3 | P | B | -0.4702 | |
| 4 | L | B | 0.2555 | |
| 5 | A | B | -1.2415 | |
| 6 | E | B | -3.1106 | |
| 7 | E | B | -2.8017 | |
| 8 | L | B | -2.7248 | |
| 9 | D | B | -4.6068 | |
| 10 | R | B | -4.8043 | |
| 11 | R | B | -4.5941 | |
| 12 | R | B | -4.3222 | |
| 13 | N | B | -3.4803 | |
| 14 | A | B | -2.2073 | |
| 15 | A | B | -1.4345 | |
| 16 | L | B | -0.1795 | |
| 17 | S | B | -0.3852 | |
| 18 | A | B | -0.2826 | |
| 19 | Q | B | -0.6368 | |
| 20 | L | B | 0.2432 | |
| 21 | S | B | -0.3063 | |
| 22 | A | B | -0.4465 | |
| 23 | A | B | -0.3737 | |
| 24 | L | B | -1.0562 | |
| 25 | Q | B | -1.6584 | |
| 26 | A | B | -0.9294 | |
| 27 | S | B | -1.7887 | |
| 28 | Q | B | -2.5527 | |
| 29 | E | B | -3.1301 | |
| 30 | D | B | -2.6851 | |
| 31 | M | B | -1.4460 | |
| 32 | T | B | -0.3651 | |
| 33 | L | B | 0.3800 | |
| 34 | A | B | 0.4121 | |
| 35 | W | B | 0.6079 | |
| 36 | R | B | -2.0739 | |
| 37 | V | B | -1.4125 | |
| 38 | D | B | -2.6954 | |
| 39 | G | B | -2.5989 | |
| 40 | E | B | -3.2053 | |
| 41 | R | B | -2.2252 | |
| 42 | V | B | 0.3003 | |
| 43 | A | B | 1.0285 | |
| 44 | L | B | 1.3826 | |
| 45 | A | B | 0.4978 | |
| 46 | R | B | -1.2824 | |
| 47 | V | B | -0.4973 | |
| 48 | V | B | -0.4033 | |
| 49 | R | B | -1.1352 | |
| 50 | L | B | 0.8393 |