| Chain sequence(s) |
A: SIIGIIMGILGNIPQVIQIIMSIVKAFKGNK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.7858 | |
| 2 | I | A | 1.4967 | |
| 3 | I | A | 1.1513 | |
| 4 | G | A | 1.3194 | |
| 5 | I | A | 2.6647 | |
| 6 | I | A | 2.3110 | |
| 7 | M | A | 1.6514 | |
| 8 | G | A | 1.3895 | |
| 9 | I | A | 2.4938 | |
| 10 | L | A | 1.5895 | |
| 11 | G | A | 0.2435 | |
| 12 | N | A | -0.6718 | |
| 13 | I | A | 0.2200 | |
| 14 | P | A | -0.5189 | |
| 15 | Q | A | -0.6756 | |
| 16 | V | A | 0.8143 | |
| 17 | I | A | 0.9551 | |
| 18 | Q | A | -0.0095 | |
| 19 | I | A | 1.3424 | |
| 20 | I | A | 1.5773 | |
| 21 | M | A | 1.0549 | |
| 22 | S | A | 0.7677 | |
| 23 | I | A | 2.1361 | |
| 24 | V | A | 0.0000 | |
| 25 | K | A | -0.9721 | |
| 26 | A | A | -0.0069 | |
| 27 | F | A | 0.9345 | |
| 28 | K | A | -1.4263 | |
| 29 | G | A | -1.6250 | |
| 30 | N | A | -1.9286 |