| Chain sequence(s) |
A: HMLDDFENGDIFIKENMIHTARFHDVAGDFYKYFGEHDEANIQYDKALSFDMDESQKNLINLKRPI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:06)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:06)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:06)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:06)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:06)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | A | -1.3151 | |
| 2 | M | A | -0.5763 | |
| 3 | L | A | -0.6929 | |
| 4 | D | A | -3.0776 | |
| 5 | D | A | -3.1172 | |
| 6 | F | A | -1.4801 | |
| 7 | E | A | -2.5761 | |
| 8 | N | A | -2.1818 | |
| 9 | G | A | -1.1226 | |
| 10 | D | A | -1.2901 | |
| 11 | I | A | -0.1380 | |
| 12 | F | A | 0.4153 | |
| 13 | I | A | 0.0000 | |
| 14 | K | A | -1.6208 | |
| 15 | E | A | -1.7018 | |
| 16 | N | A | -0.5750 | |
| 17 | M | A | 0.5780 | |
| 18 | I | A | 0.5337 | |
| 19 | H | A | -0.4960 | |
| 20 | T | A | -0.8234 | |
| 21 | A | A | -1.3507 | |
| 22 | R | A | -1.5077 | |
| 23 | F | A | -0.4956 | |
| 24 | H | A | 0.0000 | |
| 25 | D | A | 0.0000 | |
| 26 | V | A | 0.4824 | |
| 27 | A | A | 0.0000 | |
| 28 | G | A | 0.0000 | |
| 29 | D | A | -0.4902 | |
| 30 | F | A | 0.1450 | |
| 31 | Y | A | 0.0000 | |
| 32 | K | A | -1.3182 | |
| 33 | Y | A | 0.6177 | |
| 34 | F | A | 0.1676 | |
| 35 | G | A | -1.1648 | |
| 36 | E | A | -2.0187 | |
| 37 | H | A | -2.0991 | |
| 38 | D | A | -2.7737 | |
| 39 | E | A | -2.2163 | |
| 40 | A | A | 0.0000 | |
| 41 | N | A | -1.6653 | |
| 42 | I | A | -0.5615 | |
| 43 | Q | A | -0.8997 | |
| 44 | Y | A | 0.0000 | |
| 45 | D | A | -1.5568 | |
| 46 | K | A | -1.5085 | |
| 47 | A | A | 0.0000 | |
| 48 | L | A | -1.6170 | |
| 49 | S | A | -1.0211 | |
| 50 | F | A | -1.3827 | |
| 51 | D | A | -2.2223 | |
| 52 | M | A | -2.2082 | |
| 53 | D | A | -3.4849 | |
| 54 | E | A | -3.5440 | |
| 55 | S | A | -2.3289 | |
| 56 | Q | A | -2.3858 | |
| 57 | K | A | -2.5533 | |
| 58 | N | A | -1.9780 | |
| 59 | L | A | 0.0439 | |
| 60 | I | A | 0.0000 | |
| 61 | N | A | -1.0940 | |
| 62 | L | A | 0.8912 | |
| 63 | K | A | -0.0648 | |
| 64 | R | A | -0.5054 | |
| 65 | P | A | -0.1796 | |
| 66 | I | A | 1.8762 |