| Chain sequence(s) |
B: MMEEIMKLTEKIKEAMGKAVELLKKDPEEAEKELEKVKELMKELEALIAS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:12)
[INFO] Main: Simulation completed successfully. (00:02:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.9420 | |
| 2 | M | B | 0.4703 | |
| 3 | E | B | -1.8673 | |
| 4 | E | B | -2.1603 | |
| 5 | I | B | -0.9676 | |
| 6 | M | B | -1.2808 | |
| 7 | K | B | -3.3065 | |
| 8 | L | B | 0.0000 | |
| 9 | T | B | -2.4934 | |
| 10 | E | B | -4.0500 | |
| 11 | K | B | -3.8487 | |
| 12 | I | B | -3.2337 | |
| 13 | K | B | -3.9862 | |
| 14 | E | B | -3.9182 | |
| 15 | A | B | 0.0000 | |
| 16 | M | B | -2.1491 | |
| 17 | G | B | -2.0410 | |
| 18 | K | B | -2.3282 | |
| 19 | A | B | 0.0000 | |
| 20 | V | B | -0.8439 | |
| 21 | E | B | -2.3153 | |
| 22 | L | B | -2.7413 | |
| 23 | L | B | -1.7846 | |
| 24 | K | B | -2.4742 | |
| 25 | K | B | -3.1547 | |
| 26 | D | B | -3.0285 | |
| 27 | P | B | -2.8417 | |
| 28 | E | B | -3.7169 | |
| 29 | E | B | -3.9120 | |
| 30 | A | B | 0.0000 | |
| 31 | E | B | -4.0811 | |
| 32 | K | B | -4.3558 | |
| 33 | E | B | -3.6649 | |
| 34 | L | B | -3.1833 | |
| 35 | E | B | -4.3472 | |
| 36 | K | B | -3.9892 | |
| 37 | V | B | 0.0000 | |
| 38 | K | B | -3.7127 | |
| 39 | E | B | -4.3947 | |
| 40 | L | B | 0.0000 | |
| 41 | M | B | -2.8209 | |
| 42 | K | B | -3.7829 | |
| 43 | E | B | -3.2070 | |
| 44 | L | B | -1.8708 | |
| 45 | E | B | -2.1280 | |
| 46 | A | B | -1.0694 | |
| 47 | L | B | 0.1509 | |
| 48 | I | B | 1.3739 | |
| 49 | A | B | 0.3428 | |
| 50 | S | B | 0.4332 |