| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFIIVYRENIETGEAIVLTVPGSERSYDLTGLKPGTEYYVQIAGVKGGNISFPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.4731 | |
| 2 | L | A | 1.0328 | |
| 3 | P | A | 0.5074 | |
| 4 | A | A | 0.5358 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.9852 | |
| 7 | N | A | -1.2476 | |
| 8 | L | A | -0.0458 | |
| 9 | V | A | 1.4103 | |
| 10 | V | A | 0.7519 | |
| 11 | S | A | -0.6035 | |
| 12 | R | A | -2.0446 | |
| 13 | V | A | -1.0968 | |
| 14 | T | A | -1.8277 | |
| 15 | E | A | -3.1008 | |
| 16 | D | A | -2.8238 | |
| 17 | S | A | -2.1273 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2107 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3010 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2661 | |
| 24 | A | A | -1.4234 | |
| 25 | P | A | -1.3684 | |
| 26 | D | A | -2.2601 | |
| 27 | A | A | -1.4440 | |
| 28 | A | A | -1.1988 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.6478 | |
| 31 | S | A | -1.1913 | |
| 32 | F | A | 0.0000 | |
| 33 | I | A | 1.0224 | |
| 34 | I | A | 0.0000 | |
| 35 | V | A | 0.9579 | |
| 36 | Y | A | 0.5436 | |
| 37 | R | A | -0.9398 | |
| 38 | E | A | -2.0105 | |
| 39 | N | A | -1.6699 | |
| 40 | I | A | -0.4704 | |
| 41 | E | A | -1.9486 | |
| 42 | T | A | -1.5202 | |
| 43 | G | A | 0.0000 | |
| 44 | E | A | -1.9069 | |
| 45 | A | A | -0.2477 | |
| 46 | I | A | 0.9635 | |
| 47 | V | A | 2.0725 | |
| 48 | L | A | 1.4440 | |
| 49 | T | A | 0.5874 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.0838 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6006 | |
| 54 | E | A | -1.5579 | |
| 55 | R | A | -1.1691 | |
| 56 | S | A | -0.6627 | |
| 57 | Y | A | -0.7857 | |
| 58 | D | A | -1.6656 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3713 | |
| 61 | G | A | -1.5271 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.1336 | |
| 64 | P | A | -2.5517 | |
| 65 | G | A | -1.8610 | |
| 66 | T | A | -2.1386 | |
| 67 | E | A | -1.4499 | |
| 68 | Y | A | 0.0000 | |
| 69 | Y | A | 0.4735 | |
| 70 | V | A | 0.0000 | |
| 71 | Q | A | 0.5111 | |
| 72 | I | A | 0.0000 | |
| 73 | A | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.5413 | |
| 76 | K | A | -1.8759 | |
| 77 | G | A | -1.6482 | |
| 78 | G | A | -1.4448 | |
| 79 | N | A | -0.9576 | |
| 80 | I | A | 1.1624 | |
| 81 | S | A | 0.0000 | |
| 82 | F | A | 2.2980 | |
| 83 | P | A | 0.9330 | |
| 84 | L | A | 0.1247 | |
| 85 | S | A | 0.7839 | |
| 86 | A | A | 1.2874 | |
| 87 | I | A | 1.9246 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.8021 | |
| 90 | T | A | -1.9271 |