Project name: f33115a709ef717 [mutate: VG56A]

Status: done

Started: 2026-07-09 03:27:07
Settings
Chain sequence(s) A: MEELKRRFEERAERQLATYLRRLEVLKEAGASPDAEARFRARAEGLTATLLRLLEVLQRASSPEELLDSLMRRFARGLRRALQELL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues VG56A
Energy difference between WT (input) and mutated protein (by FoldX) 0.859446 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:52)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:55)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:40)
Show buried residues

Minimal score value
-4.867
Maximal score value
0.548
Average score
-2.0026
Total score value
-172.2208

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -2.4173
2 E A -3.6283
3 E A -3.9275
4 L A 0.0000
5 K A -4.0501
6 R A -4.8670
7 R A -4.6594
8 F A 0.0000
9 E A -4.5669
10 E A -4.8149
11 R A -4.1687
12 A A 0.0000
13 E A -4.1054
14 R A -3.7074
15 Q A -2.1821
16 L A -2.2046
17 A A -1.9800
18 T A -1.7678
19 Y A 0.0000
20 L A -2.0799
21 R A -2.8122
22 R A -2.9321
23 L A 0.0000
24 E A -2.9546
25 V A -0.9334
26 L A -1.3278
27 K A -2.3534
28 E A -2.2801
29 A A -0.9086
30 G A -0.5891
31 A A -1.3253
32 S A -1.2553
33 P A -1.8044
34 D A -2.6934
35 A A 0.0000
36 E A -2.9201
37 A A -2.3277
38 R A -3.3530
39 F A 0.0000
40 R A -2.5284
41 A A -2.3123
42 R A -2.3147
43 A A 0.0000
44 E A -2.5790
45 G A -1.4500
46 L A -1.0530
47 T A -1.2879
48 A A -1.0185
49 T A -0.6731
50 L A 0.0000
51 L A -1.3023
52 R A -2.1850
53 L A -0.9211
54 L A 0.0000
55 E A -2.7868
56 G A -1.6945 mutated: VG56A
57 L A -0.9660
58 Q A -1.8909
59 R A -2.1624
60 A A -1.0615
61 S A -1.3235
62 S A -1.6735
63 P A -2.4825
64 E A -3.4517
65 E A -3.3650
66 L A 0.0000
67 L A 0.0000
68 D A -3.5154
69 S A -2.5711
70 L A 0.0000
71 M A -2.6400
72 R A -3.4225
73 R A -3.1030
74 F A 0.0000
75 A A -2.6459
76 R A -3.8886
77 G A -2.8646
78 L A 0.0000
79 R A -4.0897
80 R A -4.0686
81 A A -3.0595
82 L A 0.0000
83 Q A -2.6646
84 E A -2.5734
85 L A -1.2805
86 L A 0.5480
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Laboratory of Theory of Biopolymers 2018