Project name: query_structure

Status: done

Started: 2026-03-16 21:45:08
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNISYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:47)
Show buried residues

Minimal score value
-3.0905
Maximal score value
1.5067
Average score
-0.6885
Total score value
-61.9694

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0695
2 L A 0.4283
3 P A -0.1468
4 A A -0.5093
5 P A 0.0000
6 K A -1.8415
7 N A -1.3106
8 L A 0.0653
9 V A 0.9594
10 V A 0.0500
11 S A -0.5963
12 R A -2.0063
13 V A -1.0553
14 T A -1.8128
15 E A -3.0905
16 D A -2.8172
17 S A -2.1116
18 A A 0.0000
19 R A -1.1734
20 L A 0.0000
21 S A -0.3575
22 W A 0.0000
23 T A -1.3181
24 A A -1.4121
25 P A -1.3900
26 D A -2.2780
27 A A -1.4428
28 A A -1.1963
29 F A 0.0000
30 D A -2.5071
31 S A 0.0000
32 F A 0.0000
33 N A -0.6669
34 I A 0.0000
35 S A 0.0000
36 Y A 0.3793
37 W A -0.3182
38 E A -0.8714
39 P A -0.6460
40 G A 0.1683
41 I A 1.1221
42 G A -0.2035
43 G A -0.5877
44 E A -1.3849
45 A A -0.2550
46 I A 0.9252
47 W A 1.0707
48 L A 0.0822
49 R A -1.6051
50 V A 0.0000
51 P A -1.5619
52 G A 0.0000
53 S A -1.6350
54 E A -1.5630
55 R A -1.1623
56 S A -0.6215
57 Y A -0.6760
58 D A -1.6097
59 L A 0.0000
60 T A -1.3527
61 G A -1.5233
62 L A 0.0000
63 K A -2.9946
64 P A -2.4882
65 G A -1.7680
66 T A -1.6876
67 E A -1.6166
68 Y A 0.0000
69 K A -0.8586
70 V A 0.0000
71 W A 0.9445
72 I A 0.0000
73 H A -0.3232
74 G A 0.0000
75 V A -1.3588
76 K A -1.8456
77 G A -1.4710
78 G A -1.1828
79 A A -0.6720
80 S A -0.5933
81 S A 0.0000
82 P A 0.2618
83 P A 0.2816
84 L A 0.7032
85 I A 1.5067
86 A A 0.2846
87 R A -1.4977
88 F A 0.0000
89 T A -1.4594
90 T A -1.8371
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Laboratory of Theory of Biopolymers 2018