Project name: chonkNTP

Status: done

Started: 2025-10-08 21:32:11
Settings
Chain sequence(s) B: FDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKG
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-3.9824
Maximal score value
3.0145
Average score
-0.4732
Total score value
-26.0237

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
65 F B 1.0426
66 D B -1.0430
67 P B -0.6511
68 P B -0.1968
69 T B 0.4103
70 F B 2.2236
71 P B 1.6426
72 A B 1.3203
73 L B 2.0018
74 G B 0.9258
75 T B 1.6795
76 F B 2.0567
77 S B 0.6504
78 R B -1.2400
79 Y B -0.9935
80 E B -2.0878
81 S B -2.3603
82 T B -2.4717
83 R B -2.8122
84 S B -2.0685
85 G B -2.5218
86 R B -3.9824
87 R B -3.5056
88 M B -1.7347
89 E B -2.6021
90 L B -0.4589
91 S B -0.0289
92 M B 1.0218
93 G B 0.6562
94 P B 0.9969
95 I B 1.5226
96 Q B -0.8689
97 A B -0.9165
98 N B -1.8816
99 H B -1.9906
100 T B -1.0725
101 G B -0.7427
102 T B -0.1103
103 G B 0.7131
104 L B 2.3630
105 L B 3.0145
106 L B 2.8305
107 T B 1.6844
108 L B 1.1919
109 Q B -1.4279
110 P B -1.9937
111 E B -2.9053
112 Q B -2.8775
113 K B -2.4744
114 F B -0.2971
115 Q B -1.2425
116 K B -1.6942
117 V B -0.2666
118 K B -1.4456
119 G B -1.0050
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Laboratory of Theory of Biopolymers 2018