| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPQHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRCGPDGVPLPSGPPPSPLYTPPPPSSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9469 | |
| 2 | L | A | 1.9722 | |
| 3 | P | A | 0.6538 | |
| 4 | P | A | 0.3485 | |
| 5 | T | A | 0.1034 | |
| 6 | T | A | 0.1201 | |
| 7 | P | A | 0.1639 | |
| 8 | V | A | 1.2174 | |
| 9 | A | A | 0.0148 | |
| 10 | K | A | -1.1633 | |
| 11 | V | A | -0.4144 | |
| 12 | Q | A | -1.5357 | |
| 13 | S | A | -1.6166 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4518 | |
| 16 | E | A | -2.4540 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4541 | |
| 20 | P | A | 0.1026 | |
| 21 | T | A | 0.1164 | |
| 22 | S | A | -0.1701 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0988 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2950 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8795 | |
| 31 | R | A | -2.6413 | |
| 32 | L | A | -0.7691 | |
| 33 | L | A | 1.1702 | |
| 34 | T | A | 1.5423 | |
| 35 | V | A | 1.8002 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2769 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2239 | |
| 40 | A | A | 0.0920 | |
| 41 | D | A | -0.0828 | |
| 42 | I | A | 1.5226 | |
| 43 | V | A | 1.3563 | |
| 44 | K | A | -1.1220 | |
| 45 | N | A | -1.9244 | |
| 46 | G | A | -1.1908 | |
| 47 | K | A | -0.9100 | |
| 48 | V | A | 1.7240 | |
| 49 | V | A | 2.1320 | |
| 50 | V | A | 1.5890 | |
| 51 | P | A | 0.8284 | |
| 52 | K | A | -0.0087 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1956 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4838 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3040 | |
| 70 | K | A | -1.8177 | |
| 71 | F | A | -0.6735 | |
| 72 | A | A | -0.5758 | |
| 73 | L | A | -0.8589 | |
| 74 | P | A | -1.2531 | |
| 75 | Q | A | -2.4676 | |
| 76 | K | A | -3.0875 | |
| 77 | D | A | -2.9838 | |
| 78 | F | A | -1.6271 | |
| 79 | Y | A | -1.9131 | |
| 80 | D | A | -2.7496 | |
| 81 | P | A | -2.3458 | |
| 82 | E | A | -3.0611 | |
| 83 | K | A | -3.4351 | |
| 84 | E | A | -2.4924 | |
| 85 | R | A | -1.3008 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6155 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9609 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3056 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6718 | |
| 99 | G | A | -0.5451 | |
| 100 | P | A | -0.4299 | |
| 101 | L | A | -0.0114 | |
| 102 | G | A | -0.3181 | |
| 103 | K | A | -0.8467 | |
| 104 | G | A | -0.6111 | |
| 105 | S | A | -0.6301 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1184 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4078 | |
| 110 | L | A | 0.2684 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0964 | |
| 113 | K | A | -0.3947 | |
| 114 | L | A | -0.7659 | |
| 115 | G | A | -0.7287 | |
| 116 | D | A | -1.3553 | |
| 117 | T | A | -1.2493 | |
| 118 | E | A | -2.5067 | |
| 119 | N | A | -2.3779 | |
| 120 | P | A | -1.6093 | |
| 121 | T | A | -0.8197 | |
| 122 | A | A | -0.4801 | |
| 123 | P | A | -0.0670 | |
| 124 | Q | A | -0.3129 | |
| 125 | H | A | -0.3373 | |
| 126 | C | A | -0.5420 | |
| 127 | G | A | -1.2092 | |
| 128 | A | A | -1.1787 | |
| 129 | D | A | -2.1879 | |
| 130 | D | A | -1.6981 | |
| 131 | R | A | -1.1659 | |
| 132 | V | A | 0.1908 | |
| 133 | A | A | 0.4414 | |
| 134 | F | A | 0.3003 | |
| 135 | S | A | -0.1000 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8060 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5586 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2410 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1361 | |
| 157 | D | A | 0.3356 | |
| 158 | L | A | 0.6629 | |
| 159 | A | A | 0.1515 | |
| 160 | E | A | -1.4616 | |
| 161 | P | A | -0.2397 | |
| 162 | C | A | 0.1814 | |
| 163 | P | A | -0.1609 | |
| 164 | G | A | -0.0612 | |
| 165 | L | A | 0.6167 | |
| 166 | P | A | -0.0958 | |
| 167 | P | A | -0.3317 | |
| 168 | G | A | -0.4169 | |
| 169 | A | A | 0.3120 | |
| 170 | C | A | 1.0170 | |
| 171 | P | A | 0.5232 | |
| 172 | P | A | 0.8063 | |
| 173 | I | A | 1.9071 | |
| 174 | Q | A | 0.8146 | |
| 175 | L | A | 1.4796 | |
| 176 | V | A | 0.8370 | |
| 177 | N | A | -0.3534 | |
| 178 | S | A | 0.0005 | |
| 179 | V | A | 0.3829 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3704 | |
| 182 | D | A | 0.0683 | |
| 183 | G | A | -0.1543 | |
| 184 | D | A | -0.5801 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4638 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1493 | |
| 190 | F | A | 0.0439 | |
| 191 | G | A | -0.1228 | |
| 192 | N | A | -0.3171 | |
| 193 | M | A | -0.1524 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3124 | |
| 197 | E | A | -2.5222 | |
| 198 | L | A | -1.1963 | |
| 199 | Q | A | -2.5336 | |
| 200 | Q | A | -3.3390 | |
| 201 | D | A | -3.6024 | |
| 202 | R | A | -3.3522 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4520 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3906 | |
| 211 | S | A | -1.7267 | |
| 212 | T | A | -1.4675 | |
| 213 | R | A | -2.1611 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2079 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2738 | |
| 220 | L | A | 0.4748 | |
| 221 | K | A | -1.3646 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9875 | |
| 224 | N | A | -1.7199 | |
| 225 | E | A | -1.3410 | |
| 226 | A | A | -0.6796 | |
| 227 | Y | A | -0.4616 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7130 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1435 | |
| 234 | F | A | 0.0292 | |
| 235 | G | A | -0.8866 | |
| 236 | R | A | -2.6063 | |
| 237 | R | A | -2.7716 | |
| 238 | E | A | -2.0506 | |
| 239 | Q | A | 0.0203 | |
| 240 | V | A | 1.6134 | |
| 241 | Y | A | 1.2536 | |
| 242 | A | A | 0.1286 | |
| 243 | R | A | -1.2348 | |
| 244 | H | A | -1.2228 | |
| 245 | F | A | -0.2270 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5408 | |
| 249 | C | A | -0.8583 | |
| 250 | G | A | -0.8461 | |
| 251 | P | A | -0.4745 | |
| 252 | D | A | -0.3152 | |
| 253 | G | A | 0.0967 | |
| 254 | V | A | 1.3608 | |
| 255 | P | A | 0.4781 | |
| 256 | L | A | 0.8186 | |
| 257 | P | A | 0.3425 | |
| 258 | S | A | -0.1930 | |
| 259 | G | A | -0.3239 | |
| 260 | P | A | -0.6624 | |
| 261 | P | A | -0.4831 | |
| 262 | P | A | -0.3503 | |
| 263 | S | A | 0.0749 | |
| 264 | P | A | 0.3746 | |
| 265 | L | A | 1.5458 | |
| 266 | Y | A | 0.9709 | |
| 267 | T | A | 0.0810 | |
| 268 | P | A | -0.1853 | |
| 269 | P | A | -0.0284 | |
| 270 | P | A | -0.4253 | |
| 271 | P | A | -0.1582 | |
| 272 | S | A | -0.1564 | |
| 273 | S | A | 0.1891 | |
| 274 | P | A | 0.3136 | |
| 275 | Y | A | 1.0828 | |
| 276 | A | A | 0.9064 | |
| 277 | V | A | 1.6034 | |
| 278 | R | A | 0.4165 | |
| 279 | P | A | -0.1334 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.2179 | |
| 282 | D | A | -0.6555 | |
| 283 | Y | A | 0.8224 | |
| 284 | F | A | 0.6917 | |
| 285 | G | A | 0.0496 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8258 | |
| 291 | L | A | 1.6221 | |
| 292 | V | A | 0.5650 | |
| 293 | S | A | -0.1613 | |
| 294 | S | A | -0.9685 | |
| 295 | D | A | -1.8430 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1063 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6197 | |
| 301 | R | A | -1.8676 | |
| 302 | P | A | -0.9552 | |
| 303 | F | A | -0.1712 | |
| 304 | W | A | -0.5075 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0776 | |
| 307 | R | A | -2.9252 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7849 | |
| 310 | G | A | -1.4258 | |
| 311 | N | A | -1.4049 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9380 | |
| 319 | N | A | -0.9150 | |
| 320 | E | A | -1.0709 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3998 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1652 | |
| 333 | N | A | 0.5175 | |
| 334 | F | A | 1.7856 | |
| 335 | T | A | 0.9070 | |
| 336 | I | A | 0.4734 | |
| 337 | S | A | -0.8789 | |
| 338 | Q | A | -1.5724 | |
| 339 | Q | A | -0.8105 | |
| 340 | L | A | 0.8556 | |
| 341 | C | A | 0.6387 | |
| 342 | T | A | 0.4166 | |
| 343 | P | A | 0.1494 | |
| 344 | L | A | 1.0020 | |
| 345 | P | A | 0.4428 | |
| 346 | N | A | -0.0619 | |
| 347 | V | A | 1.6796 | |
| 348 | Y | A | 1.5876 | |
| 349 | D | A | 0.2239 | |
| 350 | P | A | -0.3343 | |
| 351 | S | A | -0.2890 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5888 | |
| 354 | K | A | -1.7689 | |
| 355 | N | A | -1.7440 | |
| 356 | Y | A | -0.0592 | |
| 357 | L | A | 0.6727 | |
| 358 | R | A | 0.9707 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3591 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0309 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9166 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6635 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3036 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3195 | |
| 376 | L | A | -1.7497 | |
| 377 | D | A | -2.0387 | |
| 378 | P | A | -1.0660 | |
| 379 | G | A | -1.0182 | |
| 380 | V | A | -0.9270 | |
| 381 | L | A | -0.5372 | |
| 382 | A | A | -0.6549 | |
| 383 | H | A | -0.8454 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3870 | |
| 386 | T | A | -0.5636 | |
| 387 | M | A | -0.3286 | |
| 388 | N | A | -0.8651 | |
| 389 | P | A | -1.2653 | |
| 390 | T | A | -1.5535 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5180 | |
| 393 | E | A | -2.9215 | |
| 394 | N | A | -2.6666 | |
| 395 | W | A | -1.5117 | |
| 396 | N | A | -1.3438 | |
| 397 | L | A | -0.1954 | |
| 398 | G | A | 0.5463 | |
| 399 | F | A | 2.4179 | |
| 400 | V | A | 1.8392 | |
| 401 | P | A | 0.0487 | |
| 402 | P | A | -1.9246 | |
| 403 | K | A | -3.5672 | |
| 404 | E | A | -3.9633 | |
| 405 | R | A | -4.3502 | |
| 406 | E | A | -3.9564 | |
| 407 | D | A | -2.9333 | |
| 408 | P | A | -1.7950 | |
| 409 | Y | A | -0.9845 | |
| 410 | K | A | -2.0944 | |
| 411 | G | A | -0.6367 | |
| 412 | L | A | 0.6595 | |
| 413 | I | A | 1.5642 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4407 | |
| 416 | E | A | -1.7616 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9788 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0954 | |
| 421 | E | A | -2.8185 | |
| 422 | R | A | -2.6326 | |
| 423 | F | A | -1.3261 | |
| 424 | S | A | -1.4806 | |
| 425 | Q | A | -1.7910 | |
| 426 | D | A | -2.8968 | |
| 427 | L | A | -1.9864 | |
| 428 | D | A | -2.7813 | |
| 429 | Q | A | -2.6143 | |
| 430 | F | A | -1.4229 | |
| 431 | A | A | -0.8812 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5295 | |
| 435 | K | A | -0.6894 | |
| 436 | F | A | 0.1842 | |
| 437 | L | A | 1.0533 | |
| 438 | Y | A | 0.8456 | |
| 439 | Q | A | -0.2523 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine