| Chain sequence(s) |
A: FGGHKFG
C: FGGHKFG B: FGGHKFG E: FGGHKFG D: FGGHKFG G: FGGHKFG F: FGGHKFG I: FGGHKFG H: FGGHKFG K: FGGHKFG J: FGGHKFG M: FGGHKFG L: FGGHKFG O: FGGHKFG N: FGGHKFG Q: FGGHKFG P: FGGHKFG S: FGGHKFG R: FGGHKFG T: FGGHKFG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:48)
[INFO] Main: Simulation completed successfully. (00:10:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 4.1856 | |
| 2 | G | A | 0.0000 | |
| 3 | G | A | 0.1757 | |
| 4 | H | A | -1.0599 | |
| 5 | K | A | -1.3379 | |
| 6 | F | A | 0.0220 | |
| 7 | G | A | -0.4335 | |
| 1 | F | B | 4.0980 | |
| 2 | G | B | 1.1345 | |
| 3 | G | B | -0.4116 | |
| 4 | H | B | -1.2431 | |
| 5 | K | B | -1.4325 | |
| 6 | F | B | 0.2291 | |
| 7 | G | B | -0.3913 | |
| 1 | F | C | 4.0969 | |
| 2 | G | C | 0.0000 | |
| 3 | G | C | 0.1301 | |
| 4 | H | C | -0.9059 | |
| 5 | K | C | -2.4117 | |
| 6 | F | C | -1.2356 | |
| 7 | G | C | -0.9135 | |
| 1 | F | D | 3.3720 | |
| 2 | G | D | 1.6632 | |
| 3 | G | D | 0.0883 | |
| 4 | H | D | -0.9967 | |
| 5 | K | D | -1.1772 | |
| 6 | F | D | 0.2750 | |
| 7 | G | D | 0.0301 | |
| 1 | F | E | 3.0603 | |
| 2 | G | E | 1.3417 | |
| 3 | G | E | 0.0064 | |
| 4 | H | E | -0.5422 | |
| 5 | K | E | -1.0077 | |
| 6 | F | E | 0.7253 | |
| 7 | G | E | -0.1597 | |
| 1 | F | F | 3.4579 | |
| 2 | G | F | 1.3377 | |
| 3 | G | F | 0.0794 | |
| 4 | H | F | -0.5443 | |
| 5 | K | F | -0.7755 | |
| 6 | F | F | -0.1480 | |
| 7 | G | F | -0.2649 | |
| 1 | F | G | 3.5695 | |
| 2 | G | G | 1.6980 | |
| 3 | G | G | 0.1934 | |
| 4 | H | G | -0.4925 | |
| 5 | K | G | -0.5484 | |
| 6 | F | G | 0.7758 | |
| 7 | G | G | -0.0719 | |
| 1 | F | H | 4.4937 | |
| 2 | G | H | 0.0000 | |
| 3 | G | H | -0.0321 | |
| 4 | H | H | -0.6215 | |
| 5 | K | H | -0.6969 | |
| 6 | F | H | -0.4038 | |
| 7 | G | H | -0.3640 | |
| 1 | F | I | 4.7102 | |
| 2 | G | I | 0.0000 | |
| 3 | G | I | 0.0000 | |
| 4 | H | I | -0.7973 | |
| 5 | K | I | -1.7269 | |
| 6 | F | I | -0.0744 | |
| 7 | G | I | -0.3595 | |
| 1 | F | J | 5.0259 | |
| 2 | G | J | 3.0184 | |
| 3 | G | J | 0.7857 | |
| 4 | H | J | -0.6180 | |
| 5 | K | J | -1.6888 | |
| 6 | F | J | -0.9938 | |
| 7 | G | J | -0.6927 | |
| 1 | F | K | 4.4300 | |
| 2 | G | K | 0.5429 | |
| 3 | G | K | 0.0695 | |
| 4 | H | K | -1.1935 | |
| 5 | K | K | -1.3589 | |
| 6 | F | K | 0.8399 | |
| 7 | G | K | 0.1680 | |
| 1 | F | L | 4.1048 | |
| 2 | G | L | 1.6329 | |
| 3 | G | L | 0.0446 | |
| 4 | H | L | -1.5202 | |
| 5 | K | L | -1.8143 | |
| 6 | F | L | 0.5361 | |
| 7 | G | L | -0.1082 | |
| 1 | F | M | 4.2146 | |
| 2 | G | M | 2.3902 | |
| 3 | G | M | -0.0569 | |
| 4 | H | M | -1.4858 | |
| 5 | K | M | -1.9912 | |
| 6 | F | M | -0.4245 | |
| 7 | G | M | -0.7774 | |
| 1 | F | N | 4.1208 | |
| 2 | G | N | 0.9561 | |
| 3 | G | N | -0.5619 | |
| 4 | H | N | -1.7579 | |
| 5 | K | N | -2.1847 | |
| 6 | F | N | -0.5515 | |
| 7 | G | N | -0.8933 | |
| 1 | F | O | 3.8681 | |
| 2 | G | O | 1.5372 | |
| 3 | G | O | -0.0900 | |
| 4 | H | O | -1.1042 | |
| 5 | K | O | -1.5694 | |
| 6 | F | O | 0.4254 | |
| 7 | G | O | 0.1200 | |
| 1 | F | P | 3.4292 | |
| 2 | G | P | 0.0000 | |
| 3 | G | P | -0.5334 | |
| 4 | H | P | -1.7994 | |
| 5 | K | P | -1.6818 | |
| 6 | F | P | 0.4990 | |
| 7 | G | P | -0.1167 | |
| 1 | F | Q | 3.6763 | |
| 2 | G | Q | 1.5804 | |
| 3 | G | Q | -0.8959 | |
| 4 | H | Q | -1.6887 | |
| 5 | K | Q | -1.7713 | |
| 6 | F | Q | -0.4909 | |
| 7 | G | Q | -0.6311 | |
| 1 | F | R | 3.6594 | |
| 2 | G | R | 1.0853 | |
| 3 | G | R | 0.0090 | |
| 4 | H | R | -0.5880 | |
| 5 | K | R | -0.5857 | |
| 6 | F | R | 0.0081 | |
| 7 | G | R | -0.1024 | |
| 1 | F | S | 3.2656 | |
| 2 | G | S | 1.0176 | |
| 3 | G | S | -0.0419 | |
| 4 | H | S | -0.5454 | |
| 5 | K | S | -0.2970 | |
| 6 | F | S | 1.1575 | |
| 7 | G | S | 0.3430 | |
| 1 | F | T | 3.3746 | |
| 2 | G | T | 0.6139 | |
| 3 | G | T | 0.0000 | |
| 4 | H | T | -1.2187 | |
| 5 | K | T | -0.4970 | |
| 6 | F | T | 1.0261 | |
| 7 | G | T | 0.2180 |