| Chain sequence(s) |
A: GSMSSGSGPALRSTDEYVTPTDLLYIAETDDITFTGHPTKDIVVNGKVLVPKVSAYQFKVFKLTLPDPNTMPLPSDDFIDRSTEILIWQLKALKIERGGALGTGTYGHANFNALGDVSAPTAYLHEGADDRQALSWTPVRKQAFVVGDLPPIGVYTAPAPPAPGLPPGAPPPTTTVTTIIEDGDMADIGFGAKDFAALEPSKDEVPDIILDTSTKVLDIEGMKAEPTGRRMFFYDEKTSSSTSRLLRLAGPDPVPPPAAGPPSPLYVPPPPSSPYAVPPSRRLFSLPDAGAITAADDLFNKPYFLEKTEGKNNGILWNNQLYVTIVDNTRAAIATNKTQTATPAINVYDASYYTTSKTYTETYKLSLIVQLCKIPLTPETLEYLRRVDPSILVNANLPDIPPVERADPYEGKKFIEIDLTDKLSSDLSKSELGKEYLNK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3121 | |
| 2 | S | A | -0.0197 | |
| 3 | M | A | 0.5887 | |
| 4 | S | A | -0.0948 | |
| 5 | S | A | -0.3959 | |
| 6 | G | A | -0.7458 | |
| 7 | S | A | -0.8019 | |
| 8 | G | A | -0.9246 | |
| 9 | P | A | -0.5241 | |
| 10 | A | A | -0.1678 | |
| 11 | L | A | -0.1637 | |
| 12 | R | A | -1.2034 | |
| 13 | S | A | -1.6653 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.1419 | |
| 16 | E | A | -2.9048 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9572 | |
| 20 | P | A | -0.9598 | |
| 21 | T | A | -0.9391 | |
| 22 | D | A | -1.6179 | |
| 23 | L | A | -0.5124 | |
| 24 | L | A | -0.2036 | |
| 25 | Y | A | -0.1463 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.4065 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9036 | |
| 31 | D | A | -2.8257 | |
| 32 | I | A | -1.1553 | |
| 33 | T | A | -0.5380 | |
| 34 | F | A | 0.1132 | |
| 35 | T | A | 0.0615 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.1248 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5158 | |
| 40 | K | A | -1.9879 | |
| 41 | D | A | -0.6655 | |
| 42 | I | A | 1.4119 | |
| 43 | V | A | 2.2994 | |
| 44 | V | A | 1.7251 | |
| 45 | N | A | -0.5212 | |
| 46 | G | A | -0.3588 | |
| 47 | K | A | -0.0699 | |
| 48 | V | A | 2.1238 | |
| 49 | L | A | 2.7067 | |
| 50 | V | A | 1.5588 | |
| 51 | P | A | 0.1942 | |
| 52 | K | A | -0.9299 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.1756 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2251 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | -1.0007 | |
| 67 | D | A | -0.8582 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8250 | |
| 70 | T | A | -0.3650 | |
| 71 | M | A | -0.0851 | |
| 72 | P | A | -0.3614 | |
| 73 | L | A | -0.5463 | |
| 74 | P | A | -0.7301 | |
| 75 | S | A | -1.5425 | |
| 76 | D | A | -2.8625 | |
| 77 | D | A | -3.1014 | |
| 78 | F | A | -1.7098 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -3.3467 | |
| 81 | R | A | -3.1114 | |
| 82 | S | A | -1.9932 | |
| 83 | T | A | -1.4258 | |
| 84 | E | A | -1.7117 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | -0.3033 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6552 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | E | A | -1.4035 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7738 | |
| 99 | G | A | -0.3902 | |
| 100 | A | A | 0.1426 | |
| 101 | L | A | 0.6483 | |
| 102 | G | A | 0.3591 | |
| 103 | T | A | 0.1755 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.1058 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.6210 | |
| 108 | H | A | -1.2142 | |
| 109 | A | A | -1.0377 | |
| 110 | N | A | -2.2623 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -1.0773 | |
| 115 | G | A | -0.7384 | |
| 116 | D | A | -0.6562 | |
| 117 | V | A | 0.0366 | |
| 118 | S | A | -0.4674 | |
| 119 | A | A | -0.1364 | |
| 120 | P | A | -0.2685 | |
| 121 | T | A | -0.1146 | |
| 122 | A | A | 0.0970 | |
| 123 | Y | A | 0.3373 | |
| 124 | L | A | -0.2833 | |
| 125 | H | A | -1.1378 | |
| 126 | E | A | -2.1896 | |
| 127 | G | A | -1.9577 | |
| 128 | A | A | -1.4885 | |
| 129 | D | A | -2.7924 | |
| 130 | D | A | -2.5478 | |
| 131 | R | A | -2.5779 | |
| 132 | Q | A | -2.2044 | |
| 133 | A | A | -0.9948 | |
| 134 | L | A | -0.5112 | |
| 135 | S | A | -0.3973 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.3172 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | -0.2313 | |
| 140 | R | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | A | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0571 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | 0.3138 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.6052 | |
| 155 | Y | A | 0.2001 | |
| 156 | T | A | -0.0569 | |
| 157 | A | A | -0.1534 | |
| 158 | P | A | -0.3365 | |
| 159 | A | A | -0.2941 | |
| 160 | P | A | -0.4784 | |
| 161 | P | A | -0.4114 | |
| 162 | A | A | -0.2174 | |
| 163 | P | A | -0.3433 | |
| 164 | G | A | -0.2736 | |
| 165 | L | A | 0.2408 | |
| 166 | P | A | -0.2376 | |
| 167 | P | A | -0.4678 | |
| 168 | G | A | -0.6233 | |
| 169 | A | A | -0.3468 | |
| 170 | P | A | -0.4202 | |
| 171 | P | A | -0.3626 | |
| 172 | P | A | -0.2726 | |
| 173 | T | A | -0.3327 | |
| 174 | T | A | -0.1200 | |
| 175 | T | A | 0.1452 | |
| 176 | V | A | 0.4032 | |
| 177 | T | A | 0.3795 | |
| 178 | T | A | 0.2815 | |
| 179 | I | A | -0.0897 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2790 | |
| 182 | D | A | -1.4040 | |
| 183 | G | A | -0.8277 | |
| 184 | D | A | -0.8024 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.3041 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3449 | |
| 190 | F | A | -0.2122 | |
| 191 | G | A | -0.3630 | |
| 192 | A | A | -0.2428 | |
| 193 | K | A | -0.4607 | |
| 194 | D | A | -0.6920 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -0.9924 | |
| 197 | A | A | -0.5142 | |
| 198 | L | A | -0.3910 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -0.8736 | |
| 201 | S | A | -0.9629 | |
| 202 | K | A | -1.9473 | |
| 203 | D | A | -1.7239 | |
| 204 | E | A | -1.2394 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.8047 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.4062 | |
| 211 | D | A | -1.8265 | |
| 212 | T | A | -0.9963 | |
| 213 | S | A | -0.6492 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.4848 | |
| 217 | L | A | 0.0000 | |
| 218 | D | A | -0.6502 | |
| 219 | I | A | -1.1565 | |
| 220 | E | A | -2.3883 | |
| 221 | G | A | -1.5443 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.5397 | |
| 224 | A | A | -1.4135 | |
| 225 | E | A | -1.3140 | |
| 226 | P | A | -0.7361 | |
| 227 | T | A | -0.6478 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4093 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.4320 | |
| 234 | Y | A | -0.1095 | |
| 235 | D | A | -0.9144 | |
| 236 | E | A | -1.3777 | |
| 237 | K | A | -1.5845 | |
| 238 | T | A | -0.7098 | |
| 239 | S | A | -0.4746 | |
| 240 | S | A | -0.5246 | |
| 241 | S | A | -0.7190 | |
| 242 | T | A | -0.6933 | |
| 243 | S | A | -1.0115 | |
| 244 | R | A | -1.4761 | |
| 245 | L | A | 0.2247 | |
| 246 | L | A | 0.0000 | |
| 247 | R | A | -0.0827 | |
| 248 | L | A | 0.0000 | |
| 249 | A | A | -1.1932 | |
| 250 | G | A | -1.0895 | |
| 251 | P | A | -0.6857 | |
| 252 | D | A | -0.5001 | |
| 253 | P | A | -0.0022 | |
| 254 | V | A | 1.1406 | |
| 255 | P | A | 0.2854 | |
| 256 | P | A | 0.5875 | |
| 257 | P | A | 0.3976 | |
| 258 | A | A | 0.7064 | |
| 259 | A | A | 0.1796 | |
| 260 | G | A | -0.1502 | |
| 261 | P | A | -0.1850 | |
| 262 | P | A | 0.4505 | |
| 263 | S | A | 0.6215 | |
| 264 | P | A | 0.7449 | |
| 265 | L | A | 1.8006 | |
| 266 | Y | A | 1.5819 | |
| 267 | V | A | 1.8742 | |
| 268 | P | A | 0.9591 | |
| 269 | P | A | 0.6231 | |
| 270 | P | A | -0.1275 | |
| 271 | P | A | -0.1168 | |
| 272 | S | A | -0.3238 | |
| 273 | S | A | 0.2227 | |
| 274 | P | A | 0.4680 | |
| 275 | Y | A | 1.4378 | |
| 276 | A | A | 1.1088 | |
| 277 | V | A | 1.8710 | |
| 278 | P | A | 0.6108 | |
| 279 | P | A | -0.3442 | |
| 280 | S | A | 0.0000 | |
| 281 | R | A | -1.5381 | |
| 282 | R | A | -0.6056 | |
| 283 | L | A | 1.0349 | |
| 284 | F | A | 0.5682 | |
| 285 | S | A | 0.1014 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -0.8703 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -0.3695 | |
| 291 | A | A | 0.0079 | |
| 292 | I | A | 0.2514 | |
| 293 | T | A | -0.0836 | |
| 294 | A | A | -0.1799 | |
| 295 | A | A | -0.5457 | |
| 296 | D | A | -1.3547 | |
| 297 | D | A | -1.0410 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.5647 | |
| 301 | K | A | -1.6592 | |
| 302 | P | A | -0.9075 | |
| 303 | Y | A | -0.0925 | |
| 304 | F | A | -0.4430 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5746 | |
| 307 | K | A | -3.2740 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.5978 | |
| 310 | G | A | -2.0409 | |
| 311 | K | A | -1.9637 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.8628 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | N | A | -0.7365 | |
| 319 | N | A | -0.6875 | |
| 320 | Q | A | -0.6178 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | A | A | 0.2593 | |
| 333 | I | A | 0.0066 | |
| 334 | A | A | -0.3848 | |
| 335 | T | A | -1.2259 | |
| 336 | N | A | -1.9378 | |
| 337 | K | A | -2.3870 | |
| 338 | T | A | -1.3448 | |
| 339 | Q | A | -0.9177 | |
| 340 | T | A | -0.4739 | |
| 341 | A | A | -0.1454 | |
| 342 | T | A | -0.1754 | |
| 343 | P | A | -0.3154 | |
| 344 | A | A | -0.0130 | |
| 345 | I | A | 0.4794 | |
| 346 | N | A | -0.0512 | |
| 347 | V | A | 1.8069 | |
| 348 | Y | A | 1.7107 | |
| 349 | D | A | 0.3245 | |
| 350 | A | A | 0.1977 | |
| 351 | S | A | -0.0529 | |
| 352 | Y | A | 0.3187 | |
| 353 | Y | A | -0.4209 | |
| 354 | T | A | -0.7602 | |
| 355 | T | A | -1.3530 | |
| 356 | S | A | -1.4618 | |
| 357 | K | A | -1.6360 | |
| 358 | T | A | -0.6963 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.0121 | |
| 361 | E | A | 0.0000 | |
| 362 | T | A | -0.6243 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -1.8572 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3847 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6435 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8771 | |
| 376 | L | A | -0.8060 | |
| 377 | T | A | -0.9528 | |
| 378 | P | A | -1.5176 | |
| 379 | E | A | -2.6240 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.8629 | |
| 382 | E | A | -3.2491 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -3.1856 | |
| 386 | R | A | -2.5297 | |
| 387 | V | A | -1.1885 | |
| 388 | D | A | -1.1006 | |
| 389 | P | A | -1.7374 | |
| 390 | S | A | -1.2927 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.2550 | |
| 394 | N | A | -1.8213 | |
| 395 | A | A | -1.2844 | |
| 396 | N | A | -2.0027 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -1.6714 | |
| 399 | D | A | -2.0050 | |
| 400 | I | A | -0.8126 | |
| 401 | P | A | -0.5669 | |
| 402 | P | A | -0.8428 | |
| 403 | V | A | 0.1316 | |
| 404 | E | A | -2.2030 | |
| 405 | R | A | -2.6546 | |
| 406 | A | A | -2.0469 | |
| 407 | D | A | -2.6621 | |
| 408 | P | A | -1.7324 | |
| 409 | Y | A | -1.8048 | |
| 410 | E | A | -2.9241 | |
| 411 | G | A | -2.3251 | |
| 412 | K | A | -2.5917 | |
| 413 | K | A | -2.8186 | |
| 414 | F | A | -1.5118 | |
| 415 | I | A | -1.2052 | |
| 416 | E | A | -2.2861 | |
| 417 | I | A | -1.7058 | |
| 418 | D | A | -2.5736 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.6451 | |
| 421 | D | A | -2.3760 | |
| 422 | K | A | -2.0102 | |
| 423 | L | A | -0.8131 | |
| 424 | S | A | -0.9247 | |
| 425 | S | A | -0.5859 | |
| 426 | D | A | -1.4596 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.9798 | |
| 429 | K | A | -2.7441 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.9155 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | K | A | -2.9993 | |
| 435 | E | A | -2.1844 | |
| 436 | Y | A | -1.0044 | |
| 437 | L | A | -0.2915 | |
| 438 | N | A | -1.9023 | |
| 439 | K | A | -2.0453 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine