| Chain sequence(s) |
A: CGETCFTGTCYTNGCTCDPWPVCTRNGLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.2267 | |
| 2 | G | A | -0.1648 | |
| 3 | E | A | 0.1108 | |
| 4 | T | A | 0.7491 | |
| 5 | C | A | 0.0000 | |
| 6 | F | A | 2.1187 | |
| 7 | T | A | 1.0184 | |
| 8 | G | A | 0.4778 | |
| 9 | T | A | 0.5606 | |
| 10 | C | A | 0.5872 | |
| 11 | Y | A | 0.8990 | |
| 12 | T | A | -0.2706 | |
| 13 | N | A | -1.2430 | |
| 14 | G | A | -1.4269 | |
| 15 | C | A | -0.8545 | |
| 16 | T | A | -0.7679 | |
| 17 | C | A | -0.1559 | |
| 18 | D | A | -1.3507 | |
| 19 | P | A | -0.1388 | |
| 20 | W | A | 1.1824 | |
| 21 | P | A | 1.2408 | |
| 22 | V | A | 0.8199 | |
| 23 | C | A | 0.0000 | |
| 24 | T | A | 0.0000 | |
| 25 | R | A | -0.9764 | |
| 26 | N | A | -1.2160 | |
| 27 | G | A | -0.6973 | |
| 28 | L | A | 0.9274 | |
| 29 | P | A | 0.6013 | |
| 30 | V | A | 1.6130 |