Project name: query_structure

Status: done

Started: 2026-03-16 22:58:56
Settings
Chain sequence(s) A: CGETCFTGTCYTNGCTCDPWPVCTRNGLPV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-1.4269
Maximal score value
2.1187
Average score
0.129
Total score value
3.8703

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.2267
2 G A -0.1648
3 E A 0.1108
4 T A 0.7491
5 C A 0.0000
6 F A 2.1187
7 T A 1.0184
8 G A 0.4778
9 T A 0.5606
10 C A 0.5872
11 Y A 0.8990
12 T A -0.2706
13 N A -1.2430
14 G A -1.4269
15 C A -0.8545
16 T A -0.7679
17 C A -0.1559
18 D A -1.3507
19 P A -0.1388
20 W A 1.1824
21 P A 1.2408
22 V A 0.8199
23 C A 0.0000
24 T A 0.0000
25 R A -0.9764
26 N A -1.2160
27 G A -0.6973
28 L A 0.9274
29 P A 0.6013
30 V A 1.6130
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Laboratory of Theory of Biopolymers 2018