| Chain sequence(s) |
A: CAEAEAKAKAEAEAKAK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.2208 | |
| 2 | A | A | -1.2670 | |
| 3 | E | A | -2.7096 | |
| 4 | A | A | -2.2197 | |
| 5 | E | A | -3.1035 | |
| 6 | A | A | -2.9165 | |
| 7 | K | A | -3.6190 | |
| 8 | A | A | -3.2139 | |
| 9 | K | A | -3.7782 | |
| 10 | A | A | -3.1849 | |
| 11 | E | A | -3.5157 | |
| 12 | A | A | -3.1573 | |
| 13 | E | A | -3.6203 | |
| 14 | A | A | -2.9109 | |
| 15 | K | A | -3.1273 | |
| 16 | A | A | -2.4039 | |
| 17 | K | A | -2.5989 |